RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 PLCH2O75038 1416 aa22.28■■□□□ 1.16
CNTNAP2-225ENST00000639247 ARHGAP5Q13017 1502 aa22.28■■□□□ 1.16
CNTNAP2-225ENST00000639247 GLI2P10070 1586 aa22.27■■□□□ 1.16
CNTNAP2-225ENST00000639247 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
CNTNAP2-225ENST00000639247 ITSN2Q9NZM3 1697 aa22.25■■□□□ 1.15
CNTNAP2-225ENST00000639247 ITGAEP38570 1179 aa22.23■■□□□ 1.15
CNTNAP2-225ENST00000639247 PTPN23Q9H3S7 1636 aa22.23■■□□□ 1.15
CNTNAP2-225ENST00000639247 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
CNTNAP2-225ENST00000639247 FANCAO15360 1455 aa22.21■■□□□ 1.15
CNTNAP2-225ENST00000639247 SAMD9LQ8IVG5 1584 aa22.21■■□□□ 1.15
CNTNAP2-225ENST00000639247 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
CNTNAP2-225ENST00000639247 HNRNPMP52272 730 aaKnown RBP eCLIP22.2■■□□□ 1.14
CNTNAP2-225ENST00000639247 EFCAB2Q5VUJ9 269 aa22.2■■□□□ 1.14
CNTNAP2-225ENST00000639247 CAMSAP2Q08AD1 1489 aa22.2■■□□□ 1.14
CNTNAP2-225ENST00000639247 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
CNTNAP2-225ENST00000639247 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
CNTNAP2-225ENST00000639247 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
CNTNAP2-225ENST00000639247 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
CNTNAP2-225ENST00000639247 TCOF1Q13428 1488 aaKnown RBP22.14■■□□□ 1.14
CNTNAP2-225ENST00000639247 SYCP2Q9BX26 1530 aa22.14■■□□□ 1.13
CNTNAP2-225ENST00000639247 AKNAQ7Z591 1439 aa22.13■■□□□ 1.13
CNTNAP2-225ENST00000639247 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
CNTNAP2-225ENST00000639247 PTPRKQ15262 1439 aa22.11■■□□□ 1.13
CNTNAP2-225ENST00000639247 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
CNTNAP2-225ENST00000639247 AFAP1Q8N556 730 aa22.1■■□□□ 1.13
CNTNAP2-225ENST00000639247 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
CNTNAP2-225ENST00000639247 SCAPERQ9BY12 1400 aa22.1■■□□□ 1.13
CNTNAP2-225ENST00000639247 ABCC1P33527 1531 aa22.1■■□□□ 1.13
CNTNAP2-225ENST00000639247 MBD5Q9P267 1494 aa22.09■■□□□ 1.13
CNTNAP2-225ENST00000639247 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
CNTNAP2-225ENST00000639247 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
CNTNAP2-225ENST00000639247 ABCC5O15440 1437 aa22.06■■□□□ 1.12
CNTNAP2-225ENST00000639247 NEO1Q92859 1461 aa22.05■■□□□ 1.12
CNTNAP2-225ENST00000639247 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP2-225ENST00000639247 DAPK1P53355 1430 aa22.05■■□□□ 1.12
CNTNAP2-225ENST00000639247 TEX14Q8IWB6 1497 aa22.04■■□□□ 1.12
CNTNAP2-225ENST00000639247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
CNTNAP2-225ENST00000639247 DNMT1P26358 1616 aaKnown RBP22.03■■□□□ 1.12
CNTNAP2-225ENST00000639247 CFAP74Q9C0B2 1584 aa22.03■■□□□ 1.12
CNTNAP2-225ENST00000639247 KIAA1107Q9UPP5 1409 aa22.02■■□□□ 1.12
CNTNAP2-225ENST00000639247 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
CNTNAP2-225ENST00000639247 CCDC141Q6ZP82 1450 aa21.99■■□□□ 1.11
CNTNAP2-225ENST00000639247 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
CNTNAP2-225ENST00000639247 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
CNTNAP2-225ENST00000639247 POGZQ7Z3K3 1410 aa21.97■■□□□ 1.11
CNTNAP2-225ENST00000639247 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
CNTNAP2-225ENST00000639247 CROCC2H7BZ55 1655 aa21.96■■□□□ 1.11
CNTNAP2-225ENST00000639247 FRMPD1Q5SYB0 1578 aa21.96■■□□□ 1.11
CNTNAP2-225ENST00000639247 TSPY4P0CV99 314 aa21.95■■□□□ 1.1
CNTNAP2-225ENST00000639247 TSPY10P0CW01 314 aa21.95■■□□□ 1.1
CNTNAP2-225ENST00000639247 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
CNTNAP2-225ENST00000639247 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
CNTNAP2-225ENST00000639247 RICTORQ6R327 1708 aa21.95■■□□□ 1.1
CNTNAP2-225ENST00000639247 ZNF518AQ6AHZ1 1483 aa21.93■■□□□ 1.1
CNTNAP2-225ENST00000639247 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
CNTNAP2-225ENST00000639247 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
CNTNAP2-225ENST00000639247 KDM5CP41229 1560 aa21.89■■□□□ 1.09
CNTNAP2-225ENST00000639247 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
CNTNAP2-225ENST00000639247 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
CNTNAP2-225ENST00000639247 KIDINS220Q9ULH0 1771 aa21.87■■□□□ 1.09
CNTNAP2-225ENST00000639247 KDM6BO15054 1643 aa21.87■■□□□ 1.09
CNTNAP2-225ENST00000639247 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
CNTNAP2-225ENST00000639247 YEATS2Q9ULM3 1422 aa21.86■■□□□ 1.09
CNTNAP2-225ENST00000639247 ATP7AQ04656 1500 aa21.85■■□□□ 1.09
CNTNAP2-225ENST00000639247 INO80Q9ULG1 1556 aaPredicted RBP21.85■■□□□ 1.09
CNTNAP2-225ENST00000639247 ADGBQ8N7X0 1667 aa21.84■■□□□ 1.09
CNTNAP2-225ENST00000639247 MAST1Q9Y2H9 1570 aa21.84■■□□□ 1.09
CNTNAP2-225ENST00000639247 HECW2Q9P2P5 1572 aa21.83■■□□□ 1.09
CNTNAP2-225ENST00000639247 ANKRD30AQ9BXX3 1397 aa21.83■■□□□ 1.08
CNTNAP2-225ENST00000639247 NAIPQ13075 1403 aa21.83■■□□□ 1.08
CNTNAP2-225ENST00000639247 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
CNTNAP2-225ENST00000639247 ADGRL2O95490 1459 aa21.82■■□□□ 1.08
CNTNAP2-225ENST00000639247 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
CNTNAP2-225ENST00000639247 MLH3Q9UHC1 1453 aa21.81■■□□□ 1.08
CNTNAP2-225ENST00000639247 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
CNTNAP2-225ENST00000639247 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
CNTNAP2-225ENST00000639247 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
CNTNAP2-225ENST00000639247 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
CNTNAP2-225ENST00000639247 PLXNC1O60486 1568 aa21.77■■□□□ 1.08
CNTNAP2-225ENST00000639247 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.07
CNTNAP2-225ENST00000639247 RAB3GAP2Q9H2M9 1393 aa21.77■■□□□ 1.07
CNTNAP2-225ENST00000639247 DIP2CQ9Y2E4 1556 aa21.76■■□□□ 1.07
CNTNAP2-225ENST00000639247 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
CNTNAP2-225ENST00000639247 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
CNTNAP2-225ENST00000639247 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
CNTNAP2-225ENST00000639247 A2MP01023 1474 aa21.7■■□□□ 1.06
CNTNAP2-225ENST00000639247 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
CNTNAP2-225ENST00000639247 MAGI2Q86UL8 1455 aa21.7■■□□□ 1.06
CNTNAP2-225ENST00000639247 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
CNTNAP2-225ENST00000639247 ARHGEF40Q8TER5 1519 aa21.68■■□□□ 1.06
CNTNAP2-225ENST00000639247 KIF3BO15066 747 aa21.68■■□□□ 1.06
CNTNAP2-225ENST00000639247 ATP10AO60312 1499 aa21.67■■□□□ 1.06
CNTNAP2-225ENST00000639247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.66■■□□□ 1.06
CNTNAP2-225ENST00000639247 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
CNTNAP2-225ENST00000639247 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
CNTNAP2-225ENST00000639247 MLECQ14165 292 aa21.62■■□□□ 1.05
CNTNAP2-225ENST00000639247 GGT6Q6P531 493 aa21.62■■□□□ 1.05
CNTNAP2-225ENST00000639247 ARID4BQ4LE39 1312 aaPredicted RBP21.6■■□□□ 1.05
CNTNAP2-225ENST00000639247 NUP155O75694 1391 aa21.57■■□□□ 1.04
CNTNAP2-225ENST00000639247 MROH1Q8NDA8 1641 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms