RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 KIF13AQ9H1H9 1805 aa4.62□□□□□ -1.67
NEK1-209ENST00000638824 ATP10BO94823 1461 aa4.62□□□□□ -1.67
NEK1-209ENST00000638824 MAGI3Q5TCQ9 1506 aa4.61□□□□□ -1.67
NEK1-209ENST00000638824 MAPKBP1O60336 1514 aa4.61□□□□□ -1.67
NEK1-209ENST00000638824 ASXL2Q76L83 1435 aa4.61□□□□□ -1.67
NEK1-209ENST00000638824 TIAM1Q13009 1591 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 KIF14Q15058 1648 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 DIP2BQ9P265 1576 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 CCDC18Q5T9S5 1454 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 TSPOAP1O95153 1857 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 WDR7Q9Y4E6 1490 aa4.6□□□□□ -1.67
NEK1-209ENST00000638824 TTC37Q6PGP7 1564 aa4.59□□□□□ -1.67
NEK1-209ENST00000638824 CAPN15O75808 1086 aa4.59□□□□□ -1.67
NEK1-209ENST00000638824 ATXN8OSP0DMR3 200 aa4.59□□□□□ -1.67
NEK1-209ENST00000638824 ZNF219Q9P2Y4 722 aaPredicted RBP4.59□□□□□ -1.67
NEK1-209ENST00000638824 ABCB7O75027 752 aa4.59□□□□□ -1.68
NEK1-209ENST00000638824 NPM1P06748 294 aaKnown RBP eCLIP4.59□□□□□ -1.68
NEK1-209ENST00000638824 MYCNP04198 464 aaPredicted RBP4.58□□□□□ -1.68
NEK1-209ENST00000638824 ZBTB12Q9Y330 459 aaPredicted RBP4.58□□□□□ -1.68
NEK1-209ENST00000638824 FOXD4L1Q9NU39 408 aa4.58□□□□□ -1.68
NEK1-209ENST00000638824 MAP3K4Q9Y6R4 1608 aa4.58□□□□□ -1.68
NEK1-209ENST00000638824 PPRC1Q5VV67 1664 aaKnown RBP4.58□□□□□ -1.68
NEK1-209ENST00000638824 EHBP1L1Q8N3D4 1523 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.57□□□□□ -1.68
NEK1-209ENST00000638824 ABCC10Q5T3U5 1492 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 KCNH8Q96L42 1107 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 ABCA9Q8IUA7 1624 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 PPARGC1BQ86YN6 1023 aaKnown RBP4.57□□□□□ -1.68
NEK1-209ENST00000638824 CDC42BPAQ5VT25 1732 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 SUPT6HQ7KZ85 1726 aaKnown RBP4.57□□□□□ -1.68
NEK1-209ENST00000638824 MYO5CQ9NQX4 1742 aa4.57□□□□□ -1.68
NEK1-209ENST00000638824 TROQ12816 1431 aaPredicted RBP4.57□□□□□ -1.68
NEK1-209ENST00000638824 KANK4Q5T7N3 995 aaPredicted RBP4.57□□□□□ -1.68
NEK1-209ENST00000638824 LRRC9Q6ZRR7 1453 aa4.56□□□□□ -1.68
NEK1-209ENST00000638824 CDC42BPBQ9Y5S2 1711 aa4.56□□□□□ -1.68
NEK1-209ENST00000638824 MTUS2Q5JR59 1369 aa4.56□□□□□ -1.68
NEK1-209ENST00000638824 TRHP20396 242 aaPredicted RBP4.56□□□□□ -1.68
NEK1-209ENST00000638824 MAP3K1Q13233 1512 aa4.56□□□□□ -1.68
NEK1-209ENST00000638824 GLI2P10070 1586 aa4.56□□□□□ -1.68
NEK1-209ENST00000638824 PREX2Q70Z35 1606 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 PLEKHD1A6NEE1 506 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 FAM69CQ0P6D2 419 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 PLCB2Q00722 1185 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 POTEHQ6S545 545 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 PODXL2Q9NZ53 605 aa4.55□□□□□ -1.68
NEK1-209ENST00000638824 BCANQ96GW7 911 aa4.54□□□□□ -1.68
NEK1-209ENST00000638824 ITSN2Q9NZM3 1697 aa4.54□□□□□ -1.68
NEK1-209ENST00000638824 NCOA2Q15596 1464 aa4.54□□□□□ -1.68
NEK1-209ENST00000638824 CDK11AQ9UQ88 783 aaPredicted RBP4.54□□□□□ -1.68
NEK1-209ENST00000638824 CD109Q6YHK3 1445 aa4.53□□□□□ -1.68
NEK1-209ENST00000638824 HAP1P54257 671 aaPredicted RBP4.53□□□□□ -1.68
NEK1-209ENST00000638824 ARHGAP5Q13017 1502 aa4.53□□□□□ -1.68
NEK1-209ENST00000638824 SAMD9LQ8IVG5 1584 aa4.52□□□□□ -1.69
NEK1-209ENST00000638824 PHLDB1Q86UU1 1377 aa4.52□□□□□ -1.69
NEK1-209ENST00000638824 GPATCH8Q9UKJ3 1502 aaKnown RBP4.52□□□□□ -1.69
NEK1-209ENST00000638824 HOMEZQ8IX15 550 aa4.52□□□□□ -1.69
NEK1-209ENST00000638824 CFAP74Q9C0B2 1584 aa4.52□□□□□ -1.69
NEK1-209ENST00000638824 FANCAO15360 1455 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 CCNB3Q8WWL7 1395 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 PLCH2O75038 1416 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 SYCP2Q9BX26 1530 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 PTPN23Q9H3S7 1636 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 MYOM3Q5VTT5 1437 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 RICTORQ6R327 1708 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 ABCC1P33527 1531 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 ARAP3Q8WWN8 1544 aa4.51□□□□□ -1.69
NEK1-209ENST00000638824 FRMPD1Q5SYB0 1578 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 KDM6BO15054 1643 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 CAMSAP2Q08AD1 1489 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 TEX14Q8IWB6 1497 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 GTF3C3Q9Y5Q9 886 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 RBM42Q9BTD8 480 aaKnown RBP4.5□□□□□ -1.69
NEK1-209ENST00000638824 ZNF644Q9H582 1327 aaPredicted RBP4.5□□□□□ -1.69
NEK1-209ENST00000638824 ARHGEF12Q9NZN5 1544 aa4.5□□□□□ -1.69
NEK1-209ENST00000638824 ZNF777Q9ULD5 760 aaPredicted RBP4.5□□□□□ -1.69
NEK1-209ENST00000638824 FGD6Q6ZV73 1430 aa4.49□□□□□ -1.69
NEK1-209ENST00000638824 ADGRL1O94910 1474 aa4.49□□□□□ -1.69
NEK1-209ENST00000638824 COL17A1Q9UMD9 1497 aaPredicted RBP4.49□□□□□ -1.69
NEK1-209ENST00000638824 CROCC2H7BZ55 1655 aa4.49□□□□□ -1.69
NEK1-209ENST00000638824 AKNAQ7Z591 1439 aa4.49□□□□□ -1.69
NEK1-209ENST00000638824 NEO1Q92859 1461 aa4.49□□□□□ -1.69
NEK1-209ENST00000638824 ERICH6Q7L0X2 663 aa4.48□□□□□ -1.69
NEK1-209ENST00000638824 CFDP1Q9UEE9 299 aaPredicted RBP4.48□□□□□ -1.69
NEK1-209ENST00000638824 SCAPERQ9BY12 1400 aa4.48□□□□□ -1.69
NEK1-209ENST00000638824 TRAPPC8Q9Y2L5 1435 aa4.48□□□□□ -1.69
NEK1-209ENST00000638824 DNMT1P26358 1616 aaKnown RBP4.47□□□□□ -1.69
NEK1-209ENST00000638824 TCOF1Q13428 1488 aaKnown RBP4.47□□□□□ -1.69
NEK1-209ENST00000638824 POGZQ7Z3K3 1410 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 MIA2Q96PC5 1412 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 RAPGEF3O95398 923 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 EFCAB2Q5VUJ9 269 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 PELP1Q8IZL8 1130 aaKnown RBP4.47□□□□□ -1.69
NEK1-209ENST00000638824 KDM5CP41229 1560 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 HECW2Q9P2P5 1572 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 INO80Q9ULG1 1556 aaPredicted RBP4.47□□□□□ -1.69
NEK1-209ENST00000638824 HNRNPMP52272 730 aaKnown RBP eCLIP4.47□□□□□ -1.69
NEK1-209ENST00000638824 POLA2Q14181 598 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 KIDINS220Q9ULH0 1771 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 SIGLEC1Q9BZZ2 1709 aa4.47□□□□□ -1.69
NEK1-209ENST00000638824 MBD5Q9P267 1494 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms