RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 CLSPNQ9HAW4 1339 aa19.27■□□□□ 0.68
SCN8A-215ENST00000638820 DAPK1P53355 1430 aa19.27■□□□□ 0.67
SCN8A-215ENST00000638820 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.67
SCN8A-215ENST00000638820 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
SCN8A-215ENST00000638820 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
SCN8A-215ENST00000638820 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
SCN8A-215ENST00000638820 ABCC5O15440 1437 aa19.24■□□□□ 0.67
SCN8A-215ENST00000638820 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
SCN8A-215ENST00000638820 NAIPQ13075 1403 aa19.23■□□□□ 0.67
SCN8A-215ENST00000638820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCN8A-215ENST00000638820 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
SCN8A-215ENST00000638820 RSPH4AQ5TD94 716 aa19.22■□□□□ 0.67
SCN8A-215ENST00000638820 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
SCN8A-215ENST00000638820 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
SCN8A-215ENST00000638820 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
SCN8A-215ENST00000638820 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
SCN8A-215ENST00000638820 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
SCN8A-215ENST00000638820 FOXD1Q16676 465 aa19.18■□□□□ 0.66
SCN8A-215ENST00000638820 WDR7Q9Y4E6 1490 aa19.18■□□□□ 0.66
SCN8A-215ENST00000638820 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
SCN8A-215ENST00000638820 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
SCN8A-215ENST00000638820 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
SCN8A-215ENST00000638820 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
SCN8A-215ENST00000638820 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
SCN8A-215ENST00000638820 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
SCN8A-215ENST00000638820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.13■□□□□ 0.65
SCN8A-215ENST00000638820 KIF15Q9NS87 1388 aa19.13■□□□□ 0.65
SCN8A-215ENST00000638820 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
SCN8A-215ENST00000638820 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
SCN8A-215ENST00000638820 PLCH2O75038 1416 aa19.11■□□□□ 0.65
SCN8A-215ENST00000638820 TTC37Q6PGP7 1564 aa19.11■□□□□ 0.65
SCN8A-215ENST00000638820 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
SCN8A-215ENST00000638820 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
SCN8A-215ENST00000638820 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
SCN8A-215ENST00000638820 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
SCN8A-215ENST00000638820 FAM69CQ0P6D2 419 aa19.1■□□□□ 0.65
SCN8A-215ENST00000638820 NUP155O75694 1391 aa19.1■□□□□ 0.65
SCN8A-215ENST00000638820 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
SCN8A-215ENST00000638820 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
SCN8A-215ENST00000638820 PLEKHH2Q8IVE3 1493 aa19.08■□□□□ 0.65
SCN8A-215ENST00000638820 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
SCN8A-215ENST00000638820 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
SCN8A-215ENST00000638820 PKD2Q13563 968 aa19.07■□□□□ 0.64
SCN8A-215ENST00000638820 CD109Q6YHK3 1445 aa19.06■□□□□ 0.64
SCN8A-215ENST00000638820 FANCAO15360 1455 aa19.05■□□□□ 0.64
SCN8A-215ENST00000638820 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
SCN8A-215ENST00000638820 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
SCN8A-215ENST00000638820 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
SCN8A-215ENST00000638820 PREX2Q70Z35 1606 aa19.02■□□□□ 0.64
SCN8A-215ENST00000638820 SAMD9LQ8IVG5 1584 aa19■□□□□ 0.63
SCN8A-215ENST00000638820 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
SCN8A-215ENST00000638820 ADGRL1O94910 1474 aa19■□□□□ 0.63
SCN8A-215ENST00000638820 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
SCN8A-215ENST00000638820 KIAA1107Q9UPP5 1409 aa18.99■□□□□ 0.63
SCN8A-215ENST00000638820 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
SCN8A-215ENST00000638820 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
SCN8A-215ENST00000638820 KIF3BO15066 747 aa18.98■□□□□ 0.63
SCN8A-215ENST00000638820 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
SCN8A-215ENST00000638820 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
SCN8A-215ENST00000638820 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
SCN8A-215ENST00000638820 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
SCN8A-215ENST00000638820 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
SCN8A-215ENST00000638820 TIMELESSQ9UNS1 1208 aa18.95■□□□□ 0.62
SCN8A-215ENST00000638820 KDM6BO15054 1643 aa18.95■□□□□ 0.62
SCN8A-215ENST00000638820 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
SCN8A-215ENST00000638820 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
SCN8A-215ENST00000638820 GCC2Q8IWJ2 1684 aa18.93■□□□□ 0.62
SCN8A-215ENST00000638820 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
SCN8A-215ENST00000638820 GGT6Q6P531 493 aa18.92■□□□□ 0.62
SCN8A-215ENST00000638820 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
SCN8A-215ENST00000638820 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
SCN8A-215ENST00000638820 ARHGEF5Q12774 1597 aa18.91■□□□□ 0.62
SCN8A-215ENST00000638820 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
SCN8A-215ENST00000638820 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
SCN8A-215ENST00000638820 RGL3Q3MIN7 710 aa18.9■□□□□ 0.62
SCN8A-215ENST00000638820 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.61
SCN8A-215ENST00000638820 ADGBQ8N7X0 1667 aa18.88■□□□□ 0.61
SCN8A-215ENST00000638820 KANK1Q14678 1352 aa18.86■□□□□ 0.61
SCN8A-215ENST00000638820 ABCC1P33527 1531 aa18.86■□□□□ 0.61
SCN8A-215ENST00000638820 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
SCN8A-215ENST00000638820 CROCC2H7BZ55 1655 aa18.83■□□□□ 0.6
SCN8A-215ENST00000638820 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
SCN8A-215ENST00000638820 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
SCN8A-215ENST00000638820 ARAP3Q8WWN8 1544 aa18.81■□□□□ 0.6
SCN8A-215ENST00000638820 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
SCN8A-215ENST00000638820 ZNF518AQ6AHZ1 1483 aa18.8■□□□□ 0.6
SCN8A-215ENST00000638820 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
SCN8A-215ENST00000638820 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
SCN8A-215ENST00000638820 PZPP20742 1482 aa18.78■□□□□ 0.6
SCN8A-215ENST00000638820 MLECQ14165 292 aa18.78■□□□□ 0.6
SCN8A-215ENST00000638820 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
SCN8A-215ENST00000638820 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
SCN8A-215ENST00000638820 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.59
SCN8A-215ENST00000638820 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
SCN8A-215ENST00000638820 ATP7AQ04656 1500 aa18.75■□□□□ 0.59
SCN8A-215ENST00000638820 ESF1Q9H501 851 aaKnown RBP18.75■□□□□ 0.59
SCN8A-215ENST00000638820 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
SCN8A-215ENST00000638820 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
SCN8A-215ENST00000638820 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
SCN8A-215ENST00000638820 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms