RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
ATM-227ENST00000638786 TMEM121BQ9BXQ6 578 aaPredicted RBP13.73□□□□□ -0.21
ATM-227ENST00000638786 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
ATM-227ENST00000638786 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
ATM-227ENST00000638786 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
ATM-227ENST00000638786 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
ATM-227ENST00000638786 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
ATM-227ENST00000638786 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
ATM-227ENST00000638786 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
ATM-227ENST00000638786 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
ATM-227ENST00000638786 PDE4AP27815 886 aa13.58□□□□□ -0.24
ATM-227ENST00000638786 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
ATM-227ENST00000638786 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
ATM-227ENST00000638786 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
ATM-227ENST00000638786 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
ATM-227ENST00000638786 NCKAP5LQ9HCH0 1330 aa13.55□□□□□ -0.24
ATM-227ENST00000638786 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
ATM-227ENST00000638786 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
ATM-227ENST00000638786 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
ATM-227ENST00000638786 ABCC9O60706 1549 aa13.54□□□□□ -0.24
ATM-227ENST00000638786 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
ATM-227ENST00000638786 KIF3CO14782 793 aa13.5□□□□□ -0.25
ATM-227ENST00000638786 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
ATM-227ENST00000638786 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
ATM-227ENST00000638786 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
ATM-227ENST00000638786 KDM2AQ9Y2K7 1162 aa13.47□□□□□ -0.25
ATM-227ENST00000638786 DSG2Q14126 1118 aa13.46□□□□□ -0.25
ATM-227ENST00000638786 FOXK1P85037 733 aa13.45□□□□□ -0.26
ATM-227ENST00000638786 MFSD10Q14728 455 aa13.44□□□□□ -0.26
ATM-227ENST00000638786 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
ATM-227ENST00000638786 PLPP6Q8IY26 295 aa13.43□□□□□ -0.26
ATM-227ENST00000638786 ST18O60284 1047 aa13.35□□□□□ -0.27
ATM-227ENST00000638786 SNPHO15079 494 aa13.34□□□□□ -0.27
ATM-227ENST00000638786 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
ATM-227ENST00000638786 E2F4Q16254 413 aa13.33□□□□□ -0.28
ATM-227ENST00000638786 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
ATM-227ENST00000638786 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
ATM-227ENST00000638786 CAMK2BQ13554 666 aa13.28□□□□□ -0.28
ATM-227ENST00000638786 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
ATM-227ENST00000638786 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
ATM-227ENST00000638786 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATM-227ENST00000638786 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
ATM-227ENST00000638786 SLC34A2O95436 690 aa13.26□□□□□ -0.29
ATM-227ENST00000638786 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
ATM-227ENST00000638786 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
ATM-227ENST00000638786 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
ATM-227ENST00000638786 TBC1D12O60347 775 aa13.22□□□□□ -0.29
ATM-227ENST00000638786 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
ATM-227ENST00000638786 OXER1Q8TDS5 423 aa13.22□□□□□ -0.29
ATM-227ENST00000638786 PTCD2Q8WV60 388 aaKnown RBP13.22□□□□□ -0.29
ATM-227ENST00000638786 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
ATM-227ENST00000638786 DPYSL4O14531 572 aa13.19□□□□□ -0.3
ATM-227ENST00000638786 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
ATM-227ENST00000638786 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
ATM-227ENST00000638786 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
ATM-227ENST00000638786 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
ATM-227ENST00000638786 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATM-227ENST00000638786 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
ATM-227ENST00000638786 NUDT7P0C024 238 aa13.12□□□□□ -0.31
ATM-227ENST00000638786 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
ATM-227ENST00000638786 EVI5O60447 810 aa13.11□□□□□ -0.31
ATM-227ENST00000638786 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
ATM-227ENST00000638786 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
ATM-227ENST00000638786 PDIA6Q15084 440 aa13.06□□□□□ -0.32
ATM-227ENST00000638786 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
ATM-227ENST00000638786 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
ATM-227ENST00000638786 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
ATM-227ENST00000638786 EMP3P54852 163 aa13.02□□□□□ -0.33
ATM-227ENST00000638786 NBR1Q14596 966 aa13.02□□□□□ -0.33
ATM-227ENST00000638786 LHX6Q9UPM6 363 aa13.01□□□□□ -0.33
ATM-227ENST00000638786 ERBB3P21860 1342 aa13□□□□□ -0.33
ATM-227ENST00000638786 SEMA3EO15041 775 aa13□□□□□ -0.33
ATM-227ENST00000638786 DDX12PQ92771 950 aa12.98□□□□□ -0.33
ATM-227ENST00000638786 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
ATM-227ENST00000638786 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
ATM-227ENST00000638786 PTGER2P43116 358 aa12.96□□□□□ -0.33
ATM-227ENST00000638786 ZNF454Q8N9F8 522 aa12.94□□□□□ -0.34
ATM-227ENST00000638786 KRTAP3-3Q9BYR6 98 aa12.94□□□□□ -0.34
ATM-227ENST00000638786 KRTAP3-2Q9BYR7 98 aa12.94□□□□□ -0.34
ATM-227ENST00000638786 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
ATM-227ENST00000638786 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
ATM-227ENST00000638786 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
ATM-227ENST00000638786 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
ATM-227ENST00000638786 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
ATM-227ENST00000638786 BCANQ96GW7 911 aa12.92□□□□□ -0.34
ATM-227ENST00000638786 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
ATM-227ENST00000638786 FOSBP53539 338 aa12.91□□□□□ -0.34
ATM-227ENST00000638786 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
ATM-227ENST00000638786 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
ATM-227ENST00000638786 PHF14O94880 888 aa12.9□□□□□ -0.34
ATM-227ENST00000638786 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
ATM-227ENST00000638786 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
ATM-227ENST00000638786 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
ATM-227ENST00000638786 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
ATM-227ENST00000638786 EPAS1Q99814 870 aa12.88□□□□□ -0.35
ATM-227ENST00000638786 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
ATM-227ENST00000638786 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
ATM-227ENST00000638786 NACADO15069 1562 aa12.86□□□□□ -0.35
ATM-227ENST00000638786 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
ATM-227ENST00000638786 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms