RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
GFAP-228ENST00000638488 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
GFAP-228ENST00000638488 ANP32CO43423 234 aa16.66■□□□□ 0.26
GFAP-228ENST00000638488 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
GFAP-228ENST00000638488 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
GFAP-228ENST00000638488 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
GFAP-228ENST00000638488 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
GFAP-228ENST00000638488 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
GFAP-228ENST00000638488 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
GFAP-228ENST00000638488 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
GFAP-228ENST00000638488 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
GFAP-228ENST00000638488 NAIPQ13075 1403 aa16.61■□□□□ 0.25
GFAP-228ENST00000638488 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
GFAP-228ENST00000638488 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
GFAP-228ENST00000638488 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
GFAP-228ENST00000638488 C11orf95C9JLR9 678 aaPredicted RBP16.57■□□□□ 0.24
GFAP-228ENST00000638488 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
GFAP-228ENST00000638488 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
GFAP-228ENST00000638488 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
GFAP-228ENST00000638488 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
GFAP-228ENST00000638488 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
GFAP-228ENST00000638488 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
GFAP-228ENST00000638488 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
GFAP-228ENST00000638488 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
GFAP-228ENST00000638488 CARMIL2Q6F5E8 1435 aa16.54■□□□□ 0.24
GFAP-228ENST00000638488 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
GFAP-228ENST00000638488 TONSLQ96HA7 1378 aa16.53■□□□□ 0.24
GFAP-228ENST00000638488 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
GFAP-228ENST00000638488 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.24
GFAP-228ENST00000638488 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
GFAP-228ENST00000638488 MIA2Q96PC5 1412 aa16.52■□□□□ 0.24
GFAP-228ENST00000638488 NUP160Q12769 1436 aa16.52■□□□□ 0.23
GFAP-228ENST00000638488 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
GFAP-228ENST00000638488 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
GFAP-228ENST00000638488 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
GFAP-228ENST00000638488 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
GFAP-228ENST00000638488 KDM6BO15054 1643 aa16.48■□□□□ 0.23
GFAP-228ENST00000638488 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
GFAP-228ENST00000638488 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
GFAP-228ENST00000638488 FOXD1Q16676 465 aa16.48■□□□□ 0.23
GFAP-228ENST00000638488 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
GFAP-228ENST00000638488 DAPK1P53355 1430 aa16.46■□□□□ 0.23
GFAP-228ENST00000638488 GCC2Q8IWJ2 1684 aa16.44■□□□□ 0.22
GFAP-228ENST00000638488 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
GFAP-228ENST00000638488 KIF14Q15058 1648 aa16.43■□□□□ 0.22
GFAP-228ENST00000638488 ABCC5O15440 1437 aa16.43■□□□□ 0.22
GFAP-228ENST00000638488 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
GFAP-228ENST00000638488 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
GFAP-228ENST00000638488 PKNOX2Q96KN3 472 aa16.42■□□□□ 0.22
GFAP-228ENST00000638488 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
GFAP-228ENST00000638488 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
GFAP-228ENST00000638488 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
GFAP-228ENST00000638488 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
GFAP-228ENST00000638488 PTPRGP23470 1445 aa16.38■□□□□ 0.21
GFAP-228ENST00000638488 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
GFAP-228ENST00000638488 ATP10BO94823 1461 aa16.37■□□□□ 0.21
GFAP-228ENST00000638488 EIF5BO60841 1220 aaKnown RBP16.37■□□□□ 0.21
GFAP-228ENST00000638488 CHD1O14646 1710 aa16.37■□□□□ 0.21
GFAP-228ENST00000638488 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
GFAP-228ENST00000638488 ABCA8O94911 1581 aa16.36■□□□□ 0.21
GFAP-228ENST00000638488 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
GFAP-228ENST00000638488 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
GFAP-228ENST00000638488 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.21
GFAP-228ENST00000638488 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
GFAP-228ENST00000638488 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
GFAP-228ENST00000638488 NEFMP07197 916 aa16.31■□□□□ 0.2
GFAP-228ENST00000638488 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
GFAP-228ENST00000638488 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
GFAP-228ENST00000638488 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
GFAP-228ENST00000638488 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
GFAP-228ENST00000638488 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
GFAP-228ENST00000638488 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
GFAP-228ENST00000638488 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.2
GFAP-228ENST00000638488 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
GFAP-228ENST00000638488 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
GFAP-228ENST00000638488 ABCC10Q5T3U5 1492 aa16.25■□□□□ 0.19
GFAP-228ENST00000638488 TSPY4P0CV99 314 aa16.25■□□□□ 0.19
GFAP-228ENST00000638488 TSPY10P0CW01 314 aa16.25■□□□□ 0.19
GFAP-228ENST00000638488 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
GFAP-228ENST00000638488 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
GFAP-228ENST00000638488 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
GFAP-228ENST00000638488 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
GFAP-228ENST00000638488 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
GFAP-228ENST00000638488 GSE1Q14687 1217 aa16.23■□□□□ 0.19
GFAP-228ENST00000638488 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
GFAP-228ENST00000638488 CROCC2H7BZ55 1655 aa16.22■□□□□ 0.19
GFAP-228ENST00000638488 C9orf84Q5VXU9 1444 aa16.21■□□□□ 0.19
GFAP-228ENST00000638488 PKD2Q13563 968 aa16.21■□□□□ 0.19
GFAP-228ENST00000638488 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
GFAP-228ENST00000638488 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
GFAP-228ENST00000638488 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
GFAP-228ENST00000638488 PZPP20742 1482 aa16.2■□□□□ 0.18
GFAP-228ENST00000638488 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
GFAP-228ENST00000638488 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
GFAP-228ENST00000638488 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
GFAP-228ENST00000638488 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
GFAP-228ENST00000638488 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
GFAP-228ENST00000638488 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
GFAP-228ENST00000638488 NUP155O75694 1391 aa16.17■□□□□ 0.18
GFAP-228ENST00000638488 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms