RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 CASKIN1Q8WXD9 1431 aa5.88□□□□□ -1.47
SCN3A-208ENST00000638473 MIER1Q8N108 512 aa5.88□□□□□ -1.47
SCN3A-208ENST00000638473 ARHGAP5Q13017 1502 aa5.88□□□□□ -1.47
SCN3A-208ENST00000638473 LRRC9Q6ZRR7 1453 aa5.87□□□□□ -1.47
SCN3A-208ENST00000638473 CDCA8Q53HL2 280 aa5.87□□□□□ -1.47
SCN3A-208ENST00000638473 IQGAP2Q13576 1575 aa5.87□□□□□ -1.47
SCN3A-208ENST00000638473 HDGFP51858 240 aaKnown RBP5.87□□□□□ -1.47
SCN3A-208ENST00000638473 RSPH4AQ5TD94 716 aa5.87□□□□□ -1.47
SCN3A-208ENST00000638473 SUPT6HQ7KZ85 1726 aaKnown RBP5.86□□□□□ -1.47
SCN3A-208ENST00000638473 SYNJ2O15056 1496 aa5.86□□□□□ -1.47
SCN3A-208ENST00000638473 PRXQ9BXM0 1461 aa5.86□□□□□ -1.47
SCN3A-208ENST00000638473 KNSTRNQ9Y448 316 aa5.86□□□□□ -1.47
SCN3A-208ENST00000638473 CTTNBP2Q8WZ74 1663 aa5.86□□□□□ -1.47
SCN3A-208ENST00000638473 FAM69CQ0P6D2 419 aa5.85□□□□□ -1.47
SCN3A-208ENST00000638473 WASHC2CQ9Y4E1 1318 aa5.85□□□□□ -1.47
SCN3A-208ENST00000638473 HAP1P54257 671 aaPredicted RBP5.85□□□□□ -1.47
SCN3A-208ENST00000638473 STK26Q9P289 416 aa5.85□□□□□ -1.47
SCN3A-208ENST00000638473 EHBP1L1Q8N3D4 1523 aa5.85□□□□□ -1.47
SCN3A-208ENST00000638473 ROCK2O75116 1388 aaKnown RBP5.85□□□□□ -1.47
SCN3A-208ENST00000638473 CC2D1BQ5T0F9 858 aaKnown RBP5.85□□□□□ -1.47
SCN3A-208ENST00000638473 PBRM1Q86U86 1689 aa5.85□□□□□ -1.47
SCN3A-208ENST00000638473 SAFB2Q14151 953 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN3A-208ENST00000638473 NCOA2Q15596 1464 aa5.84□□□□□ -1.47
SCN3A-208ENST00000638473 PPM1GO15355 546 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-208ENST00000638473 TMF1P82094 1093 aa5.84□□□□□ -1.47
SCN3A-208ENST00000638473 PCF11O94913 1555 aaKnown RBP5.84□□□□□ -1.47
SCN3A-208ENST00000638473 NUTM2DQ5VT03 806 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-208ENST00000638473 A0A0G2JS52 829 aa5.83□□□□□ -1.48
SCN3A-208ENST00000638473 FKBP8Q14318 412 aa5.83□□□□□ -1.48
SCN3A-208ENST00000638473 MYOM3Q5VTT5 1437 aa5.83□□□□□ -1.48
SCN3A-208ENST00000638473 MAGI1Q96QZ7 1491 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-208ENST00000638473 FGD6Q6ZV73 1430 aa5.83□□□□□ -1.48
SCN3A-208ENST00000638473 HSPA5P11021 654 aaKnown RBP5.83□□□□□ -1.48
SCN3A-208ENST00000638473 ZNF608Q9ULD9 1512 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-208ENST00000638473 TNNT2P45379 298 aaPredicted RBP5.83□□□□□ -1.48
SCN3A-208ENST00000638473 SRPK2P78362 688 aaKnown RBP5.83□□□□□ -1.48
SCN3A-208ENST00000638473 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
SCN3A-208ENST00000638473 TIAM1Q13009 1591 aa5.82□□□□□ -1.48
SCN3A-208ENST00000638473 LMOD2Q6P5Q4 547 aa5.82□□□□□ -1.48
SCN3A-208ENST00000638473 ZNF644Q9H582 1327 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-208ENST00000638473 CFAP53Q96M91 514 aa5.82□□□□□ -1.48
SCN3A-208ENST00000638473 CDK13Q14004 1512 aaKnown RBP5.82□□□□□ -1.48
SCN3A-208ENST00000638473 SENP3-EIF4A1A0A087X0R7 540 aa5.82□□□□□ -1.48
SCN3A-208ENST00000638473 PHLDB1Q86UU1 1377 aa5.82□□□□□ -1.48
SCN3A-208ENST00000638473 KIAA0586Q9BVV6 1533 aa5.81□□□□□ -1.48
SCN3A-208ENST00000638473 TIMELESSQ9UNS1 1208 aa5.81□□□□□ -1.48
SCN3A-208ENST00000638473 KIF14Q15058 1648 aa5.8□□□□□ -1.48
SCN3A-208ENST00000638473 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-208ENST00000638473 CCDC144AA2RUR9 1427 aa5.79□□□□□ -1.48
SCN3A-208ENST00000638473 EID1Q9Y6B2 187 aa5.79□□□□□ -1.48
SCN3A-208ENST00000638473 EIF3AQ14152 1382 aaKnown RBP5.79□□□□□ -1.48
SCN3A-208ENST00000638473 DHX57Q6P158 1386 aaKnown RBP5.79□□□□□ -1.48
SCN3A-208ENST00000638473 EIF4G3O43432 1585 aaKnown RBP5.78□□□□□ -1.48
SCN3A-208ENST00000638473 EPRSP07814 1512 aaKnown RBP5.78□□□□□ -1.48
SCN3A-208ENST00000638473 LAS1LQ9Y4W2 734 aaKnown RBP5.78□□□□□ -1.48
SCN3A-208ENST00000638473 SOX12O15370 315 aa5.78□□□□□ -1.48
SCN3A-208ENST00000638473 IRX6P78412 446 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-208ENST00000638473 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
SCN3A-208ENST00000638473 UACAQ9BZF9 1416 aa5.78□□□□□ -1.48
SCN3A-208ENST00000638473 KIF15Q9NS87 1388 aa5.78□□□□□ -1.48
SCN3A-208ENST00000638473 HDGFL2Q7Z4V5 671 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-208ENST00000638473 PTPN23Q9H3S7 1636 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 ADAMTS12P58397 1594 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 MAPK8IP3Q9UPT6 1336 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 NEUROD2Q15784 382 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 NUDCQ9Y266 331 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 U2SURPO15042 1029 aaKnown RBP5.77□□□□□ -1.49
SCN3A-208ENST00000638473 PAK3O75914 559 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-208ENST00000638473 RAPGEF6Q8TEU7 1601 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 PLB1Q6P1J6 1458 aa5.77□□□□□ -1.49
SCN3A-208ENST00000638473 MORC1Q86VD1 984 aa5.76□□□□□ -1.49
SCN3A-208ENST00000638473 WDR62O43379 1518 aa5.76□□□□□ -1.49
SCN3A-208ENST00000638473 TROQ12816 1431 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-208ENST00000638473 NPM2Q86SE8 214 aaKnown RBP5.76□□□□□ -1.49
SCN3A-208ENST00000638473 ARHGEF11O15085 1522 aa5.75□□□□□ -1.49
SCN3A-208ENST00000638473 RRBP1Q9P2E9 1410 aaKnown RBP5.75□□□□□ -1.49
SCN3A-208ENST00000638473 PLEKHH2Q8IVE3 1493 aa5.75□□□□□ -1.49
SCN3A-208ENST00000638473 TRAK1Q9UPV9 953 aa5.75□□□□□ -1.49
SCN3A-208ENST00000638473 C9orf84Q5VXU9 1444 aa5.75□□□□□ -1.49
SCN3A-208ENST00000638473 PNNQ9H307 717 aaKnown RBP5.75□□□□□ -1.49
SCN3A-208ENST00000638473 KTN1Q86UP2 1357 aaKnown RBP5.75□□□□□ -1.49
SCN3A-208ENST00000638473 CCDC136Q96JN2 1154 aa5.74□□□□□ -1.49
SCN3A-208ENST00000638473 ANKRD50Q9ULJ7 1429 aa5.74□□□□□ -1.49
SCN3A-208ENST00000638473 AFAP1Q8N556 730 aa5.74□□□□□ -1.49
SCN3A-208ENST00000638473 DAPK1P53355 1430 aa5.74□□□□□ -1.49
SCN3A-208ENST00000638473 CAMSAP2Q08AD1 1489 aa5.73□□□□□ -1.49
SCN3A-208ENST00000638473 MIA2Q96PC5 1412 aa5.73□□□□□ -1.49
SCN3A-208ENST00000638473 RTL5Q5HYW3 569 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-208ENST00000638473 ARXQ96QS3 562 aa5.73□□□□□ -1.49
SCN3A-208ENST00000638473 MYH16Q9H6N6 1097 aa5.73□□□□□ -1.49
SCN3A-208ENST00000638473 ITSN2Q9NZM3 1697 aa5.72□□□□□ -1.49
SCN3A-208ENST00000638473 KIAA0556O60303 1618 aa5.72□□□□□ -1.49
SCN3A-208ENST00000638473 VGFO15240 615 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-208ENST00000638473 THOC2Q8NI27 1593 aaKnown RBP5.72□□□□□ -1.49
SCN3A-208ENST00000638473 NUTM2FA1L443 756 aa5.72□□□□□ -1.49
SCN3A-208ENST00000638473 ANP32AP39687 249 aaKnown RBP5.72□□□□□ -1.49
SCN3A-208ENST00000638473 SCAPERQ9BY12 1400 aa5.72□□□□□ -1.49
SCN3A-208ENST00000638473 ABCA5Q8WWZ7 1642 aa5.71□□□□□ -1.5
SCN3A-208ENST00000638473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCN3A-208ENST00000638473 FTSJ3Q8IY81 847 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms