RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
MYCN-202ENST00000638417 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
MYCN-202ENST00000638417 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
MYCN-202ENST00000638417 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
MYCN-202ENST00000638417 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
MYCN-202ENST00000638417 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
MYCN-202ENST00000638417 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
MYCN-202ENST00000638417 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
MYCN-202ENST00000638417 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
MYCN-202ENST00000638417 LRRC9Q6ZRR7 1453 aa23.4■■□□□ 1.34
MYCN-202ENST00000638417 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
MYCN-202ENST00000638417 ZMYM4Q5VZL5 1548 aa23.38■■□□□ 1.33
MYCN-202ENST00000638417 POGZQ7Z3K3 1410 aa23.37■■□□□ 1.33
MYCN-202ENST00000638417 YEATS2Q9ULM3 1422 aa23.37■■□□□ 1.33
MYCN-202ENST00000638417 ZFYVE16Q7Z3T8 1539 aa23.36■■□□□ 1.33
MYCN-202ENST00000638417 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
MYCN-202ENST00000638417 ADAMTSL3P82987 1691 aa23.35■■□□□ 1.33
MYCN-202ENST00000638417 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
MYCN-202ENST00000638417 HECW2Q9P2P5 1572 aa23.33■■□□□ 1.33
MYCN-202ENST00000638417 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.32
MYCN-202ENST00000638417 MADDQ8WXG6 1647 aa23.31■■□□□ 1.32
MYCN-202ENST00000638417 MAGI2Q86UL8 1455 aa23.31■■□□□ 1.32
MYCN-202ENST00000638417 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
MYCN-202ENST00000638417 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
MYCN-202ENST00000638417 PTPRMP28827 1452 aa23.29■■□□□ 1.32
MYCN-202ENST00000638417 AFAP1Q8N556 730 aa23.28■■□□□ 1.32
MYCN-202ENST00000638417 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
MYCN-202ENST00000638417 ZNF518AQ6AHZ1 1483 aa23.27■■□□□ 1.32
MYCN-202ENST00000638417 MLECQ14165 292 aa23.26■■□□□ 1.31
MYCN-202ENST00000638417 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
MYCN-202ENST00000638417 EHBP1L1Q8N3D4 1523 aa23.24■■□□□ 1.31
MYCN-202ENST00000638417 RIMS1Q86UR5 1692 aaKnown RBP23.24■■□□□ 1.31
MYCN-202ENST00000638417 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
MYCN-202ENST00000638417 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
MYCN-202ENST00000638417 ATP10AO60312 1499 aa23.21■■□□□ 1.31
MYCN-202ENST00000638417 KDM5CP41229 1560 aa23.21■■□□□ 1.31
MYCN-202ENST00000638417 ABCC1P33527 1531 aa23.21■■□□□ 1.31
MYCN-202ENST00000638417 ARHGEF12Q9NZN5 1544 aa23.21■■□□□ 1.31
MYCN-202ENST00000638417 C9orf84Q5VXU9 1444 aa23.19■■□□□ 1.3
MYCN-202ENST00000638417 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
MYCN-202ENST00000638417 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
MYCN-202ENST00000638417 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
MYCN-202ENST00000638417 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
MYCN-202ENST00000638417 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
MYCN-202ENST00000638417 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
MYCN-202ENST00000638417 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.3
MYCN-202ENST00000638417 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
MYCN-202ENST00000638417 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
MYCN-202ENST00000638417 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
MYCN-202ENST00000638417 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
MYCN-202ENST00000638417 SYCP2Q9BX26 1530 aa23.12■■□□□ 1.29
MYCN-202ENST00000638417 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
MYCN-202ENST00000638417 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
MYCN-202ENST00000638417 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
MYCN-202ENST00000638417 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
MYCN-202ENST00000638417 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
MYCN-202ENST00000638417 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
MYCN-202ENST00000638417 LMTK3Q96Q04 1460 aa23.04■■□□□ 1.28
MYCN-202ENST00000638417 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
MYCN-202ENST00000638417 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
MYCN-202ENST00000638417 SPAG9O60271 1321 aaKnown RBP23.03■■□□□ 1.28
MYCN-202ENST00000638417 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
MYCN-202ENST00000638417 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
MYCN-202ENST00000638417 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
MYCN-202ENST00000638417 ITGAEP38570 1179 aa23■■□□□ 1.27
MYCN-202ENST00000638417 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
MYCN-202ENST00000638417 HSPA2P54652 639 aa22.99■■□□□ 1.27
MYCN-202ENST00000638417 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
MYCN-202ENST00000638417 AGLP35573 1532 aa22.97■■□□□ 1.27
MYCN-202ENST00000638417 INO80Q9ULG1 1556 aaPredicted RBP22.95■■□□□ 1.26
MYCN-202ENST00000638417 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
MYCN-202ENST00000638417 MIA2Q96PC5 1412 aa22.94■■□□□ 1.26
MYCN-202ENST00000638417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.26
MYCN-202ENST00000638417 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
MYCN-202ENST00000638417 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
MYCN-202ENST00000638417 ILDR1Q86SU0 546 aaPredicted RBP22.9■■□□□ 1.26
MYCN-202ENST00000638417 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.26
MYCN-202ENST00000638417 C3P01024 1663 aa22.89■■□□□ 1.25
MYCN-202ENST00000638417 A2MP01023 1474 aa22.88■■□□□ 1.25
MYCN-202ENST00000638417 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
MYCN-202ENST00000638417 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
MYCN-202ENST00000638417 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
MYCN-202ENST00000638417 ADGBQ8N7X0 1667 aa22.84■■□□□ 1.25
MYCN-202ENST00000638417 GGT6Q6P531 493 aa22.84■■□□□ 1.25
MYCN-202ENST00000638417 CCDC141Q6ZP82 1450 aa22.83■■□□□ 1.25
MYCN-202ENST00000638417 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
MYCN-202ENST00000638417 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
MYCN-202ENST00000638417 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
MYCN-202ENST00000638417 CLTCQ00610 1675 aaKnown RBP22.79■■□□□ 1.24
MYCN-202ENST00000638417 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
MYCN-202ENST00000638417 SETD1BQ9UPS6 1966 aaKnown RBP22.77■■□□□ 1.24
MYCN-202ENST00000638417 MROH2AA6NES4 1674 aa22.77■■□□□ 1.23
MYCN-202ENST00000638417 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
MYCN-202ENST00000638417 RSPH4AQ5TD94 716 aa22.76■■□□□ 1.23
MYCN-202ENST00000638417 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
MYCN-202ENST00000638417 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
MYCN-202ENST00000638417 DHX29Q7Z478 1369 aaKnown RBP22.75■■□□□ 1.23
MYCN-202ENST00000638417 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
MYCN-202ENST00000638417 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
MYCN-202ENST00000638417 KIF3BO15066 747 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms