RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-222ENST00000638134 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
CLCN2-222ENST00000638134 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
CLCN2-222ENST00000638134 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
CLCN2-222ENST00000638134 MTUS2Q5JR59 1369 aa21.73■■□□□ 1.07
CLCN2-222ENST00000638134 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
CLCN2-222ENST00000638134 NPM1P06748 294 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLCN2-222ENST00000638134 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
CLCN2-222ENST00000638134 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
CLCN2-222ENST00000638134 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
CLCN2-222ENST00000638134 ASXL2Q76L83 1435 aa21.66■■□□□ 1.06
CLCN2-222ENST00000638134 NOP58Q9Y2X3 529 aaKnown RBP21.65■■□□□ 1.06
CLCN2-222ENST00000638134 ANP32CO43423 234 aa21.65■■□□□ 1.06
CLCN2-222ENST00000638134 SALL2Q9Y467 1007 aaPredicted RBP21.65■■□□□ 1.06
CLCN2-222ENST00000638134 KIF14Q15058 1648 aa21.65■■□□□ 1.06
CLCN2-222ENST00000638134 TROQ12816 1431 aaPredicted RBP21.65■■□□□ 1.06
CLCN2-222ENST00000638134 UBE2Q2Q8WVN8 375 aa21.64■■□□□ 1.06
CLCN2-222ENST00000638134 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
CLCN2-222ENST00000638134 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
CLCN2-222ENST00000638134 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
CLCN2-222ENST00000638134 PPP4R2Q9NY27 417 aa21.6■■□□□ 1.05
CLCN2-222ENST00000638134 NCOA2Q15596 1464 aa21.59■■□□□ 1.05
CLCN2-222ENST00000638134 PHLDB1Q86UU1 1377 aa21.58■■□□□ 1.05
CLCN2-222ENST00000638134 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
CLCN2-222ENST00000638134 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
CLCN2-222ENST00000638134 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
CLCN2-222ENST00000638134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.53■■□□□ 1.04
CLCN2-222ENST00000638134 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
CLCN2-222ENST00000638134 NBR1Q14596 966 aa21.5■■□□□ 1.03
CLCN2-222ENST00000638134 RTL5Q5HYW3 569 aaPredicted RBP21.5■■□□□ 1.03
CLCN2-222ENST00000638134 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
CLCN2-222ENST00000638134 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
CLCN2-222ENST00000638134 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CLCN2-222ENST00000638134 FAM69CQ0P6D2 419 aa21.45■■□□□ 1.02
CLCN2-222ENST00000638134 CDC42BPAQ5VT25 1732 aa21.45■■□□□ 1.02
CLCN2-222ENST00000638134 MYOM3Q5VTT5 1437 aa21.44■■□□□ 1.02
CLCN2-222ENST00000638134 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
CLCN2-222ENST00000638134 DIP2BQ9P265 1576 aa21.43■■□□□ 1.02
CLCN2-222ENST00000638134 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
CLCN2-222ENST00000638134 ABCA9Q8IUA7 1624 aa21.42■■□□□ 1.02
CLCN2-222ENST00000638134 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
CLCN2-222ENST00000638134 IRX6P78412 446 aaPredicted RBP21.41■■□□□ 1.02
CLCN2-222ENST00000638134 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
CLCN2-222ENST00000638134 FGD6Q6ZV73 1430 aa21.4■■□□□ 1.02
CLCN2-222ENST00000638134 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
CLCN2-222ENST00000638134 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
CLCN2-222ENST00000638134 KIF13AQ9H1H9 1805 aa21.39■■□□□ 1.01
CLCN2-222ENST00000638134 IL27Q8NEV9 243 aa21.38■■□□□ 1.01
CLCN2-222ENST00000638134 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
CLCN2-222ENST00000638134 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
CLCN2-222ENST00000638134 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
CLCN2-222ENST00000638134 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
CLCN2-222ENST00000638134 CD109Q6YHK3 1445 aa21.37■■□□□ 1.01
CLCN2-222ENST00000638134 PREX2Q70Z35 1606 aa21.36■■□□□ 1.01
CLCN2-222ENST00000638134 SETD5Q9C0A6 1442 aa21.36■■□□□ 1.01
CLCN2-222ENST00000638134 TSPOAP1O95153 1857 aa21.36■■□□□ 1.01
CLCN2-222ENST00000638134 ARHGAP5Q13017 1502 aa21.35■■□□□ 1.01
CLCN2-222ENST00000638134 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
CLCN2-222ENST00000638134 ANP32AP39687 249 aaKnown RBP21.35■■□□□ 1.01
CLCN2-222ENST00000638134 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
CLCN2-222ENST00000638134 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
CLCN2-222ENST00000638134 PLCH2O75038 1416 aa21.35■■□□□ 1.01
CLCN2-222ENST00000638134 PTPN23Q9H3S7 1636 aa21.34■■□□□ 1.01
CLCN2-222ENST00000638134 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
CLCN2-222ENST00000638134 GLI2P10070 1586 aa21.33■■□□□ 1
CLCN2-222ENST00000638134 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1
CLCN2-222ENST00000638134 MIA2Q96PC5 1412 aa21.31■■□□□ 1
CLCN2-222ENST00000638134 ZBTB47Q9UFB7 747 aaPredicted RBP21.31■■□□□ 1
CLCN2-222ENST00000638134 USP35Q9P2H5 1018 aa21.3■■□□□ 1
CLCN2-222ENST00000638134 CAMSAP2Q08AD1 1489 aa21.3■■□□□ 1
CLCN2-222ENST00000638134 SAMD9LQ8IVG5 1584 aa21.29■■□□□ 1
CLCN2-222ENST00000638134 FANCAO15360 1455 aa21.29■■□□□ 1
CLCN2-222ENST00000638134 HNRNPMP52272 730 aaKnown RBP eCLIP21.27■■□□□ 1
CLCN2-222ENST00000638134 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
CLCN2-222ENST00000638134 B4GALNT3Q6L9W6 998 aa21.27■■□□□ 1
CLCN2-222ENST00000638134 PPRC1Q5VV67 1664 aaKnown RBP21.26■□□□□ 0.99
CLCN2-222ENST00000638134 TCOF1Q13428 1488 aaKnown RBP21.25■□□□□ 0.99
CLCN2-222ENST00000638134 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
CLCN2-222ENST00000638134 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
CLCN2-222ENST00000638134 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
CLCN2-222ENST00000638134 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.23■□□□□ 0.99
CLCN2-222ENST00000638134 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
CLCN2-222ENST00000638134 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
CLCN2-222ENST00000638134 RTN4Q9NQC3 1192 aaKnown RBP21.22■□□□□ 0.99
CLCN2-222ENST00000638134 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
CLCN2-222ENST00000638134 AKNAQ7Z591 1439 aa21.21■□□□□ 0.99
CLCN2-222ENST00000638134 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
CLCN2-222ENST00000638134 ADGRL1O94910 1474 aa21.19■□□□□ 0.98
CLCN2-222ENST00000638134 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
CLCN2-222ENST00000638134 ABCC1P33527 1531 aa21.18■□□□□ 0.98
CLCN2-222ENST00000638134 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
CLCN2-222ENST00000638134 SCAPERQ9BY12 1400 aa21.17■□□□□ 0.98
CLCN2-222ENST00000638134 TRAPPC8Q9Y2L5 1435 aa21.17■□□□□ 0.98
CLCN2-222ENST00000638134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLCN2-222ENST00000638134 ABCC5O15440 1437 aa21.16■□□□□ 0.98
CLCN2-222ENST00000638134 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
CLCN2-222ENST00000638134 ZBED9Q6R2W3 1325 aa21.16■□□□□ 0.98
CLCN2-222ENST00000638134 DAPK1P53355 1430 aa21.15■□□□□ 0.98
CLCN2-222ENST00000638134 RAPGEF3O95398 923 aa21.14■□□□□ 0.98
CLCN2-222ENST00000638134 DNMT1P26358 1616 aaKnown RBP21.14■□□□□ 0.97
CLCN2-222ENST00000638134 NEO1Q92859 1461 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms