RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 SIGLEC1Q9BZZ2 1709 aa20.13■□□□□ 0.81
CACNA1A-250ENST00000637809 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
CACNA1A-250ENST00000637809 RIMS1Q86UR5 1692 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-250ENST00000637809 EFCAB2Q5VUJ9 269 aa20.1■□□□□ 0.81
CACNA1A-250ENST00000637809 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
CACNA1A-250ENST00000637809 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-250ENST00000637809 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-250ENST00000637809 MLECQ14165 292 aa20.06■□□□□ 0.8
CACNA1A-250ENST00000637809 KIF14Q15058 1648 aa20.05■□□□□ 0.8
CACNA1A-250ENST00000637809 ATP10AO60312 1499 aa20.05■□□□□ 0.8
CACNA1A-250ENST00000637809 HSPA2P54652 639 aa20.05■□□□□ 0.8
CACNA1A-250ENST00000637809 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
CACNA1A-250ENST00000637809 C9orf84Q5VXU9 1444 aa20.03■□□□□ 0.8
CACNA1A-250ENST00000637809 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
CACNA1A-250ENST00000637809 ZNF518AQ6AHZ1 1483 aa20.01■□□□□ 0.79
CACNA1A-250ENST00000637809 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
CACNA1A-250ENST00000637809 MYO5CQ9NQX4 1742 aa20.01■□□□□ 0.79
CACNA1A-250ENST00000637809 CLIP1P30622 1438 aa20.01■□□□□ 0.79
CACNA1A-250ENST00000637809 ARHGAP5Q13017 1502 aa20■□□□□ 0.79
CACNA1A-250ENST00000637809 KDM5CP41229 1560 aa19.99■□□□□ 0.79
CACNA1A-250ENST00000637809 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
CACNA1A-250ENST00000637809 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
CACNA1A-250ENST00000637809 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
CACNA1A-250ENST00000637809 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-250ENST00000637809 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
CACNA1A-250ENST00000637809 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
CACNA1A-250ENST00000637809 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
CACNA1A-250ENST00000637809 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
CACNA1A-250ENST00000637809 REREQ9P2R6 1566 aa19.9■□□□□ 0.78
CACNA1A-250ENST00000637809 ABCC1P33527 1531 aa19.89■□□□□ 0.77
CACNA1A-250ENST00000637809 CDC42BPBQ9Y5S2 1711 aa19.89■□□□□ 0.77
CACNA1A-250ENST00000637809 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
CACNA1A-250ENST00000637809 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
CACNA1A-250ENST00000637809 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
CACNA1A-250ENST00000637809 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
CACNA1A-250ENST00000637809 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
CACNA1A-250ENST00000637809 AGLP35573 1532 aa19.85■□□□□ 0.77
CACNA1A-250ENST00000637809 PREX1Q8TCU6 1659 aa19.82■□□□□ 0.76
CACNA1A-250ENST00000637809 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
CACNA1A-250ENST00000637809 ITSN2Q9NZM3 1697 aa19.8■□□□□ 0.76
CACNA1A-250ENST00000637809 GPATCH8Q9UKJ3 1502 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-250ENST00000637809 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
CACNA1A-250ENST00000637809 CDC42BPAQ5VT25 1732 aa19.77■□□□□ 0.76
CACNA1A-250ENST00000637809 SAMD9LQ8IVG5 1584 aa19.77■□□□□ 0.76
CACNA1A-250ENST00000637809 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-250ENST00000637809 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
CACNA1A-250ENST00000637809 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 SYCP2Q9BX26 1530 aa19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 STRCQ7RTU9 1775 aa19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 CNTLNQ9NXG0 1405 aa19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 C3P01024 1663 aa19.74■□□□□ 0.75
CACNA1A-250ENST00000637809 KIAA1107Q9UPP5 1409 aa19.73■□□□□ 0.75
CACNA1A-250ENST00000637809 SPAG9O60271 1321 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-250ENST00000637809 PTPRTO14522 1441 aa19.7■□□□□ 0.74
CACNA1A-250ENST00000637809 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-250ENST00000637809 SETD1BQ9UPS6 1966 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-250ENST00000637809 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
CACNA1A-250ENST00000637809 PLEKHH2Q8IVE3 1493 aa19.68■□□□□ 0.74
CACNA1A-250ENST00000637809 ZMYM3Q14202 1370 aa19.67■□□□□ 0.74
CACNA1A-250ENST00000637809 NPATQ14207 1427 aa19.67■□□□□ 0.74
CACNA1A-250ENST00000637809 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
CACNA1A-250ENST00000637809 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
CACNA1A-250ENST00000637809 NCOA1Q15788 1441 aa19.66■□□□□ 0.74
CACNA1A-250ENST00000637809 PLXNC1O60486 1568 aa19.66■□□□□ 0.74
CACNA1A-250ENST00000637809 A2MP01023 1474 aa19.65■□□□□ 0.74
CACNA1A-250ENST00000637809 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-250ENST00000637809 ZNF644Q9H582 1327 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-250ENST00000637809 MROH2AA6NES4 1674 aa19.62■□□□□ 0.73
CACNA1A-250ENST00000637809 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
CACNA1A-250ENST00000637809 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
CACNA1A-250ENST00000637809 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
CACNA1A-250ENST00000637809 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-250ENST00000637809 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
CACNA1A-250ENST00000637809 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
CACNA1A-250ENST00000637809 GGT6Q6P531 493 aa19.58■□□□□ 0.72
CACNA1A-250ENST00000637809 CAMSAP1Q5T5Y3 1602 aa19.58■□□□□ 0.72
CACNA1A-250ENST00000637809 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
CACNA1A-250ENST00000637809 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
CACNA1A-250ENST00000637809 NCKAP5LQ9HCH0 1330 aa19.55■□□□□ 0.72
CACNA1A-250ENST00000637809 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
CACNA1A-250ENST00000637809 CLTCQ00610 1675 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-250ENST00000637809 DHX29Q7Z478 1369 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-250ENST00000637809 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
CACNA1A-250ENST00000637809 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
CACNA1A-250ENST00000637809 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-250ENST00000637809 MYO3AQ8NEV4 1616 aa19.5■□□□□ 0.71
CACNA1A-250ENST00000637809 ADGBQ8N7X0 1667 aa19.49■□□□□ 0.71
CACNA1A-250ENST00000637809 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-250ENST00000637809 PKD2Q13563 968 aa19.49■□□□□ 0.71
CACNA1A-250ENST00000637809 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-250ENST00000637809 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-250ENST00000637809 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
CACNA1A-250ENST00000637809 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
CACNA1A-250ENST00000637809 CAMSAP2Q08AD1 1489 aa19.46■□□□□ 0.71
CACNA1A-250ENST00000637809 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
CACNA1A-250ENST00000637809 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
CACNA1A-250ENST00000637809 KIF3BO15066 747 aa19.44■□□□□ 0.7
CACNA1A-250ENST00000637809 RSPH4AQ5TD94 716 aa19.44■□□□□ 0.7
CACNA1A-250ENST00000637809 FBXO31Q5XUX0 539 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms