RNA–Protein interactions for RNA: ENST00000637651.1

EPB41L3-236, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 6,962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-236ENST00000637651 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
EPB41L3-236ENST00000637651 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
EPB41L3-236ENST00000637651 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
EPB41L3-236ENST00000637651 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 CDCA8Q53HL2 280 aa16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 ARID3AQ99856 593 aa16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
EPB41L3-236ENST00000637651 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.31
EPB41L3-236ENST00000637651 FBXW7Q969H0 707 aa16.97■□□□□ 0.31
EPB41L3-236ENST00000637651 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
EPB41L3-236ENST00000637651 MSNP26038 577 aaKnown RBP16.97■□□□□ 0.31
EPB41L3-236ENST00000637651 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
EPB41L3-236ENST00000637651 GOLGA6L1Q8N7Z2 621 aa16.96■□□□□ 0.31
EPB41L3-236ENST00000637651 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
EPB41L3-236ENST00000637651 PES1O00541 588 aaKnown RBP16.95■□□□□ 0.3
EPB41L3-236ENST00000637651 TPM4P67936 248 aa16.95■□□□□ 0.3
EPB41L3-236ENST00000637651 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
EPB41L3-236ENST00000637651 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
EPB41L3-236ENST00000637651 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-236ENST00000637651 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
EPB41L3-236ENST00000637651 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
EPB41L3-236ENST00000637651 TNNT3P45378 269 aaPredicted RBP16.9■□□□□ 0.3
EPB41L3-236ENST00000637651 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
EPB41L3-236ENST00000637651 STK26Q9P289 416 aa16.88■□□□□ 0.29
EPB41L3-236ENST00000637651 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
EPB41L3-236ENST00000637651 MS4A1P11836 297 aa16.86■□□□□ 0.29
EPB41L3-236ENST00000637651 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
EPB41L3-236ENST00000637651 PAF1Q8N7H5 531 aa16.86■□□□□ 0.29
EPB41L3-236ENST00000637651 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
EPB41L3-236ENST00000637651 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
EPB41L3-236ENST00000637651 TPM3P06753 285 aa16.84■□□□□ 0.29
EPB41L3-236ENST00000637651 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
EPB41L3-236ENST00000637651 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
EPB41L3-236ENST00000637651 EVA1CP58658 441 aa16.8■□□□□ 0.28
EPB41L3-236ENST00000637651 NOL10Q9BSC4 688 aaKnown RBP16.8■□□□□ 0.28
EPB41L3-236ENST00000637651 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
EPB41L3-236ENST00000637651 TRIM6-TRIM34B2RNG4 842 aa16.77■□□□□ 0.27
EPB41L3-236ENST00000637651 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.27
EPB41L3-236ENST00000637651 PPM1FP49593 454 aaPredicted RBP16.76■□□□□ 0.27
EPB41L3-236ENST00000637651 AMOTL1Q8IY63 956 aa16.76■□□□□ 0.27
EPB41L3-236ENST00000637651 CALRP27797 417 aaKnown RBP16.76■□□□□ 0.27
EPB41L3-236ENST00000637651 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
EPB41L3-236ENST00000637651 TPM2P07951 284 aa16.75■□□□□ 0.27
EPB41L3-236ENST00000637651 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
EPB41L3-236ENST00000637651 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
EPB41L3-236ENST00000637651 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
EPB41L3-236ENST00000637651 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
EPB41L3-236ENST00000637651 MORC1Q86VD1 984 aa16.74■□□□□ 0.27
EPB41L3-236ENST00000637651 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
EPB41L3-236ENST00000637651 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
EPB41L3-236ENST00000637651 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
EPB41L3-236ENST00000637651 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
EPB41L3-236ENST00000637651 PCMTD1Q96MG8 357 aaPredicted RBP16.73■□□□□ 0.27
EPB41L3-236ENST00000637651 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
EPB41L3-236ENST00000637651 AKAP17AQ02040 695 aaKnown RBP16.72■□□□□ 0.27
EPB41L3-236ENST00000637651 PPP4R2Q9NY27 417 aa16.71■□□□□ 0.27
EPB41L3-236ENST00000637651 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
EPB41L3-236ENST00000637651 KANK1Q14678 1352 aa16.71■□□□□ 0.27
EPB41L3-236ENST00000637651 TMEM132AQ24JP5 1023 aa16.71■□□□□ 0.27
EPB41L3-236ENST00000637651 B4GALNT3Q6L9W6 998 aa16.71■□□□□ 0.27
EPB41L3-236ENST00000637651 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.26
EPB41L3-236ENST00000637651 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
EPB41L3-236ENST00000637651 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
EPB41L3-236ENST00000637651 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
EPB41L3-236ENST00000637651 ODF2Q5BJF6 829 aa16.69■□□□□ 0.26
EPB41L3-236ENST00000637651 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
EPB41L3-236ENST00000637651 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
EPB41L3-236ENST00000637651 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
EPB41L3-236ENST00000637651 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
EPB41L3-236ENST00000637651 WDR70Q9NW82 654 aa16.68■□□□□ 0.26
EPB41L3-236ENST00000637651 GGT6Q6P531 493 aa16.67■□□□□ 0.26
EPB41L3-236ENST00000637651 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
EPB41L3-236ENST00000637651 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
EPB41L3-236ENST00000637651 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
EPB41L3-236ENST00000637651 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
EPB41L3-236ENST00000637651 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
EPB41L3-236ENST00000637651 ZFYVE27Q5T4F4 411 aa16.65■□□□□ 0.26
EPB41L3-236ENST00000637651 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
EPB41L3-236ENST00000637651 CCDC97Q96F63 343 aaPredicted RBP16.64■□□□□ 0.25
EPB41L3-236ENST00000637651 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
EPB41L3-236ENST00000637651 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
EPB41L3-236ENST00000637651 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
EPB41L3-236ENST00000637651 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
EPB41L3-236ENST00000637651 AK7Q96M32 723 aa16.63■□□□□ 0.25
EPB41L3-236ENST00000637651 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
EPB41L3-236ENST00000637651 H3BQV1 296 aa16.61■□□□□ 0.25
EPB41L3-236ENST00000637651 SLC4A3P48751 1232 aa16.61■□□□□ 0.25
EPB41L3-236ENST00000637651 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
EPB41L3-236ENST00000637651 CCDC70Q6NSX1 233 aa16.61■□□□□ 0.25
EPB41L3-236ENST00000637651 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
EPB41L3-236ENST00000637651 TMF1P82094 1093 aa16.6■□□□□ 0.25
EPB41L3-236ENST00000637651 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
EPB41L3-236ENST00000637651 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
EPB41L3-236ENST00000637651 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
EPB41L3-236ENST00000637651 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
EPB41L3-236ENST00000637651 IBSPP21815 317 aaPredicted RBP16.59■□□□□ 0.25
EPB41L3-236ENST00000637651 AMPHP49418 695 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms