RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-242ENST00000637485 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
CACNA1A-242ENST00000637485 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
CACNA1A-242ENST00000637485 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-242ENST00000637485 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CACNA1A-242ENST00000637485 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-242ENST00000637485 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
CACNA1A-242ENST00000637485 NOC3LQ8WTT2 800 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-242ENST00000637485 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-242ENST00000637485 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
CACNA1A-242ENST00000637485 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
CACNA1A-242ENST00000637485 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
CACNA1A-242ENST00000637485 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 CADPSQ9ULU8 1353 aa12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 MS4A1P11836 297 aa12.28□□□□□ -0.44
CACNA1A-242ENST00000637485 GSE1Q14687 1217 aa12.27□□□□□ -0.45
CACNA1A-242ENST00000637485 ZBTB7CA1YPR0 619 aa12.26□□□□□ -0.45
CACNA1A-242ENST00000637485 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-242ENST00000637485 MAP7D2Q96T17 732 aa12.26□□□□□ -0.45
CACNA1A-242ENST00000637485 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
CACNA1A-242ENST00000637485 HTATSF1O43719 755 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-242ENST00000637485 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
CACNA1A-242ENST00000637485 KANK1Q14678 1352 aa12.25□□□□□ -0.45
CACNA1A-242ENST00000637485 MTERF4Q7Z6M4 381 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-242ENST00000637485 NOM1Q5C9Z4 860 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-242ENST00000637485 GPS2Q13227 327 aa12.23□□□□□ -0.45
CACNA1A-242ENST00000637485 MCCP23508 829 aa12.23□□□□□ -0.45
CACNA1A-242ENST00000637485 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
CACNA1A-242ENST00000637485 RAB3GAP2Q9H2M9 1393 aa12.21□□□□□ -0.45
CACNA1A-242ENST00000637485 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
CACNA1A-242ENST00000637485 TPM4P67936 248 aa12.2□□□□□ -0.46
CACNA1A-242ENST00000637485 TMF1P82094 1093 aa12.2□□□□□ -0.46
CACNA1A-242ENST00000637485 TDRD9Q8NDG6 1382 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-242ENST00000637485 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
CACNA1A-242ENST00000637485 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-242ENST00000637485 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-242ENST00000637485 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-242ENST00000637485 FGD1P98174 961 aa12.19□□□□□ -0.46
CACNA1A-242ENST00000637485 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
CACNA1A-242ENST00000637485 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
CACNA1A-242ENST00000637485 PHF14O94880 888 aa12.18□□□□□ -0.46
CACNA1A-242ENST00000637485 DCAF11Q8TEB1 546 aa12.18□□□□□ -0.46
CACNA1A-242ENST00000637485 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
CACNA1A-242ENST00000637485 CCDC66A2RUB6 948 aa12.17□□□□□ -0.46
CACNA1A-242ENST00000637485 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
CACNA1A-242ENST00000637485 ANKRD30AQ9BXX3 1397 aa12.17□□□□□ -0.46
CACNA1A-242ENST00000637485 HSPA5P11021 654 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-242ENST00000637485 CCDC18Q5T9S5 1454 aa12.15□□□□□ -0.46
CACNA1A-242ENST00000637485 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-242ENST00000637485 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.47
CACNA1A-242ENST00000637485 KCNJ4P48050 445 aa12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 SKOR2Q2VWA4 1001 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 PKD2Q13563 968 aa12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 FHOD3Q2V2M9 1422 aa12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 POGKQ9P215 609 aa12.14□□□□□ -0.47
CACNA1A-242ENST00000637485 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-242ENST00000637485 TPM2P07951 284 aa12.13□□□□□ -0.47
CACNA1A-242ENST00000637485 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
CACNA1A-242ENST00000637485 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
CACNA1A-242ENST00000637485 CWC15Q9P013 229 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-242ENST00000637485 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-242ENST00000637485 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
CACNA1A-242ENST00000637485 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-242ENST00000637485 EFCAB2Q5VUJ9 269 aa12.1□□□□□ -0.47
CACNA1A-242ENST00000637485 TPM3P06753 285 aa12.09□□□□□ -0.47
CACNA1A-242ENST00000637485 C14orf37Q86TY3 774 aa12.09□□□□□ -0.47
CACNA1A-242ENST00000637485 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
CACNA1A-242ENST00000637485 NUP155O75694 1391 aa12.09□□□□□ -0.47
CACNA1A-242ENST00000637485 KTN1Q86UP2 1357 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-242ENST00000637485 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-242ENST00000637485 RALBP1Q15311 655 aa12.07□□□□□ -0.48
CACNA1A-242ENST00000637485 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-242ENST00000637485 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-242ENST00000637485 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-242ENST00000637485 CCDC34Q96HJ3 373 aa12.06□□□□□ -0.48
CACNA1A-242ENST00000637485 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-242ENST00000637485 CCDC70Q6NSX1 233 aa12.05□□□□□ -0.48
CACNA1A-242ENST00000637485 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-242ENST00000637485 TAF3Q5VWG9 929 aa12.05□□□□□ -0.48
CACNA1A-242ENST00000637485 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-242ENST00000637485 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 FOXD1Q16676 465 aa12.04□□□□□ -0.48
CACNA1A-242ENST00000637485 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
CACNA1A-242ENST00000637485 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-242ENST00000637485 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
CACNA1A-242ENST00000637485 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
CACNA1A-242ENST00000637485 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-242ENST00000637485 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
CACNA1A-242ENST00000637485 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-242ENST00000637485 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.49
CACNA1A-242ENST00000637485 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
CACNA1A-242ENST00000637485 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms