RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 BCL11AQ9H165 835 aa27.32■■□□□ 1.96
CACNA1A-241ENST00000637475 TCOF1Q13428 1488 aaKnown RBP27.29■■□□□ 1.96
CACNA1A-241ENST00000637475 UGGT2Q9NYU1 1516 aa27.28■■□□□ 1.96
CACNA1A-241ENST00000637475 MTUS2Q5JR59 1369 aa27.27■■□□□ 1.96
CACNA1A-241ENST00000637475 HIRIP3Q9BW71 556 aaPredicted RBP27.24■■□□□ 1.95
CACNA1A-241ENST00000637475 P3H3Q8IVL6 736 aa27.22■■□□□ 1.95
CACNA1A-241ENST00000637475 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
CACNA1A-241ENST00000637475 ADCY10Q96PN6 1610 aa27.2■■□□□ 1.94
CACNA1A-241ENST00000637475 CNTLNQ9NXG0 1405 aa27.19■■□□□ 1.94
CACNA1A-241ENST00000637475 DENND4BO75064 1496 aaPredicted RBP27.18■■□□□ 1.94
CACNA1A-241ENST00000637475 MSH5O43196 834 aa27.17■■□□□ 1.94
CACNA1A-241ENST00000637475 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
CACNA1A-241ENST00000637475 POLR1AO95602 1720 aaPredicted RBP27.15■■□□□ 1.94
CACNA1A-241ENST00000637475 WASHC2AQ641Q2 1341 aa27.15■■□□□ 1.94
CACNA1A-241ENST00000637475 NPM1P06748 294 aaKnown RBP eCLIP27.15■■□□□ 1.94
CACNA1A-241ENST00000637475 KIF13AQ9H1H9 1805 aa27.14■■□□□ 1.94
CACNA1A-241ENST00000637475 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
CACNA1A-241ENST00000637475 ATP1B4Q9UN42 357 aaPredicted RBP27.13■■□□□ 1.93
CACNA1A-241ENST00000637475 PTPRGP23470 1445 aa27.13■■□□□ 1.93
CACNA1A-241ENST00000637475 CARMIL2Q6F5E8 1435 aa27.13■■□□□ 1.93
CACNA1A-241ENST00000637475 NCOA1Q15788 1441 aa27.11■■□□□ 1.93
CACNA1A-241ENST00000637475 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
CACNA1A-241ENST00000637475 PPP4R2Q9NY27 417 aa27.09■■□□□ 1.93
CACNA1A-241ENST00000637475 HSPA5P11021 654 aaKnown RBP27.07■■□□□ 1.92
CACNA1A-241ENST00000637475 DISP1Q96F81 1524 aa27.07■■□□□ 1.92
CACNA1A-241ENST00000637475 MIA2Q96PC5 1412 aa27.07■■□□□ 1.92
CACNA1A-241ENST00000637475 MAGI3Q5TCQ9 1506 aa27.06■■□□□ 1.92
CACNA1A-241ENST00000637475 ABCC10Q5T3U5 1492 aa27.04■■□□□ 1.92
CACNA1A-241ENST00000637475 EIF4G2P78344 907 aaKnown RBP eCLIP27.04■■□□□ 1.92
CACNA1A-241ENST00000637475 FAM69CQ0P6D2 419 aa27.04■■□□□ 1.92
CACNA1A-241ENST00000637475 ZBED9Q6R2W3 1325 aa27.01■■□□□ 1.91
CACNA1A-241ENST00000637475 CCDC7Q96M83 1385 aa27■■□□□ 1.91
CACNA1A-241ENST00000637475 DIP2BQ9P265 1576 aa27■■□□□ 1.91
CACNA1A-241ENST00000637475 KDM6BO15054 1643 aa26.98■■□□□ 1.91
CACNA1A-241ENST00000637475 KIAA0556O60303 1618 aa26.96■■□□□ 1.91
CACNA1A-241ENST00000637475 RPRD2Q5VT52 1461 aaKnown RBP26.96■■□□□ 1.91
CACNA1A-241ENST00000637475 PRKRIP1Q9H875 184 aaPredicted RBP26.95■■□□□ 1.91
CACNA1A-241ENST00000637475 ROCK1Q13464 1354 aa26.94■■□□□ 1.9
CACNA1A-241ENST00000637475 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
CACNA1A-241ENST00000637475 TEX14Q8IWB6 1497 aa26.94■■□□□ 1.9
CACNA1A-241ENST00000637475 SPATA31E1Q6ZUB1 1445 aa26.94■■□□□ 1.9
CACNA1A-241ENST00000637475 UHRF1BP1LA0JNW5 1464 aa26.9■■□□□ 1.9
CACNA1A-241ENST00000637475 EPRSP07814 1512 aaKnown RBP26.88■■□□□ 1.89
CACNA1A-241ENST00000637475 ANKRD30BQ9BXX2 1392 aa26.88■■□□□ 1.89
CACNA1A-241ENST00000637475 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
CACNA1A-241ENST00000637475 ERICH6Q7L0X2 663 aa26.85■■□□□ 1.89
CACNA1A-241ENST00000637475 ASXL2Q76L83 1435 aa26.85■■□□□ 1.89
CACNA1A-241ENST00000637475 DNMT1P26358 1616 aaKnown RBP26.85■■□□□ 1.89
CACNA1A-241ENST00000637475 L3MBTL2Q969R5 705 aa26.84■■□□□ 1.89
CACNA1A-241ENST00000637475 SMG6Q86US8 1419 aaKnown RBP26.84■■□□□ 1.89
CACNA1A-241ENST00000637475 TSPOAP1O95153 1857 aa26.84■■□□□ 1.89
CACNA1A-241ENST00000637475 IRX6P78412 446 aaPredicted RBP26.82■■□□□ 1.88
CACNA1A-241ENST00000637475 CCDC184Q52MB2 194 aa26.82■■□□□ 1.88
CACNA1A-241ENST00000637475 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
CACNA1A-241ENST00000637475 RNF123Q5XPI4 1314 aa26.8■■□□□ 1.88
CACNA1A-241ENST00000637475 PLB1Q6P1J6 1458 aa26.8■■□□□ 1.88
CACNA1A-241ENST00000637475 C11orf95C9JLR9 678 aaPredicted RBP26.79■■□□□ 1.88
CACNA1A-241ENST00000637475 ZCCHC11Q5TAX3 1644 aaKnown RBP26.77■■□□□ 1.88
CACNA1A-241ENST00000637475 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
CACNA1A-241ENST00000637475 DAPK1P53355 1430 aa26.77■■□□□ 1.88
CACNA1A-241ENST00000637475 MRS2Q9HD23 443 aa26.77■■□□□ 1.88
CACNA1A-241ENST00000637475 KIF7Q2M1P5 1343 aa26.74■■□□□ 1.87
CACNA1A-241ENST00000637475 ARID4BQ4LE39 1312 aaPredicted RBP26.72■■□□□ 1.87
CACNA1A-241ENST00000637475 GLI2P10070 1586 aa26.71■■□□□ 1.87
CACNA1A-241ENST00000637475 DHX29Q7Z478 1369 aaKnown RBP26.7■■□□□ 1.87
CACNA1A-241ENST00000637475 NBPF8Q3BBV2 869 aa26.7■■□□□ 1.86
CACNA1A-241ENST00000637475 ABCA8O94911 1581 aa26.69■■□□□ 1.86
CACNA1A-241ENST00000637475 CDK13Q14004 1512 aaKnown RBP26.69■■□□□ 1.86
CACNA1A-241ENST00000637475 ABCC5O15440 1437 aa26.69■■□□□ 1.86
CACNA1A-241ENST00000637475 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
CACNA1A-241ENST00000637475 CHIC2Q9UKJ5 165 aa26.67■■□□□ 1.86
CACNA1A-241ENST00000637475 KIF14Q15058 1648 aa26.67■■□□□ 1.86
CACNA1A-241ENST00000637475 PPRC1Q5VV67 1664 aaKnown RBP26.66■■□□□ 1.86
CACNA1A-241ENST00000637475 FAM9BQ8IZU0 186 aa26.66■■□□□ 1.86
CACNA1A-241ENST00000637475 B4GALNT3Q6L9W6 998 aa26.65■■□□□ 1.86
CACNA1A-241ENST00000637475 ADGBQ8N7X0 1667 aa26.64■■□□□ 1.86
CACNA1A-241ENST00000637475 PZPP20742 1482 aa26.64■■□□□ 1.85
CACNA1A-241ENST00000637475 NUDCQ9Y266 331 aa26.62■■□□□ 1.85
CACNA1A-241ENST00000637475 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
CACNA1A-241ENST00000637475 NOP58Q9Y2X3 529 aaKnown RBP26.61■■□□□ 1.85
CACNA1A-241ENST00000637475 KDM5CP41229 1560 aa26.61■■□□□ 1.85
CACNA1A-241ENST00000637475 BCORL1Q5H9F3 1711 aa26.6■■□□□ 1.85
CACNA1A-241ENST00000637475 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
CACNA1A-241ENST00000637475 ADGRL2O95490 1459 aa26.59■■□□□ 1.85
CACNA1A-241ENST00000637475 ROCK2O75116 1388 aaKnown RBP26.58■■□□□ 1.85
CACNA1A-241ENST00000637475 ARID3CA6NKF2 412 aa26.58■■□□□ 1.85
CACNA1A-241ENST00000637475 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
CACNA1A-241ENST00000637475 CROCC2H7BZ55 1655 aa26.55■■□□□ 1.84
CACNA1A-241ENST00000637475 ITSN2Q9NZM3 1697 aa26.55■■□□□ 1.84
CACNA1A-241ENST00000637475 KIAA1107Q9UPP5 1409 aa26.53■■□□□ 1.84
CACNA1A-241ENST00000637475 KTN1Q86UP2 1357 aaKnown RBP26.52■■□□□ 1.84
CACNA1A-241ENST00000637475 DEKP35659 375 aaKnown RBP26.51■■□□□ 1.83
CACNA1A-241ENST00000637475 RALGAPBQ86X10 1494 aa26.51■■□□□ 1.83
CACNA1A-241ENST00000637475 ARHGEF12Q9NZN5 1544 aa26.51■■□□□ 1.83
CACNA1A-241ENST00000637475 FOXD1Q16676 465 aa26.5■■□□□ 1.83
CACNA1A-241ENST00000637475 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
CACNA1A-241ENST00000637475 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
CACNA1A-241ENST00000637475 USP47Q96K76 1375 aa26.49■■□□□ 1.83
CACNA1A-241ENST00000637475 ATP10BO94823 1461 aa26.48■■□□□ 1.83
CACNA1A-241ENST00000637475 SLC4A1APQ9BWU0 796 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms