RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 KIF13AQ9H1H9 1805 aa20.27■□□□□ 0.84
LINC00643-207ENST00000637212 GLI2P10070 1586 aa20.26■□□□□ 0.83
LINC00643-207ENST00000637212 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
LINC00643-207ENST00000637212 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
LINC00643-207ENST00000637212 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
LINC00643-207ENST00000637212 TTC37Q6PGP7 1564 aa20.24■□□□□ 0.83
LINC00643-207ENST00000637212 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
LINC00643-207ENST00000637212 KIAA1107Q9UPP5 1409 aa20.21■□□□□ 0.83
LINC00643-207ENST00000637212 PTPN23Q9H3S7 1636 aa20.21■□□□□ 0.83
LINC00643-207ENST00000637212 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
LINC00643-207ENST00000637212 ARHGAP5Q13017 1502 aa20.21■□□□□ 0.83
LINC00643-207ENST00000637212 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
LINC00643-207ENST00000637212 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
LINC00643-207ENST00000637212 CDC42BPAQ5VT25 1732 aa20.18■□□□□ 0.82
LINC00643-207ENST00000637212 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
LINC00643-207ENST00000637212 ITGAEP38570 1179 aa20.17■□□□□ 0.82
LINC00643-207ENST00000637212 FANCAO15360 1455 aa20.17■□□□□ 0.82
LINC00643-207ENST00000637212 DIP2BQ9P265 1576 aa20.16■□□□□ 0.82
LINC00643-207ENST00000637212 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
LINC00643-207ENST00000637212 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
LINC00643-207ENST00000637212 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
LINC00643-207ENST00000637212 ABCC5O15440 1437 aa20.14■□□□□ 0.81
LINC00643-207ENST00000637212 MBD5Q9P267 1494 aa20.13■□□□□ 0.81
LINC00643-207ENST00000637212 AKNAQ7Z591 1439 aa20.13■□□□□ 0.81
LINC00643-207ENST00000637212 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
LINC00643-207ENST00000637212 NEO1Q92859 1461 aa20.12■□□□□ 0.81
LINC00643-207ENST00000637212 DAPK1P53355 1430 aa20.11■□□□□ 0.81
LINC00643-207ENST00000637212 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
LINC00643-207ENST00000637212 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
LINC00643-207ENST00000637212 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
LINC00643-207ENST00000637212 TEX14Q8IWB6 1497 aa20.09■□□□□ 0.81
LINC00643-207ENST00000637212 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
LINC00643-207ENST00000637212 ROCK1Q13464 1354 aa20.08■□□□□ 0.8
LINC00643-207ENST00000637212 ARHGEF5Q12774 1597 aa20.07■□□□□ 0.8
LINC00643-207ENST00000637212 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
LINC00643-207ENST00000637212 ADGRL1O94910 1474 aa20.06■□□□□ 0.8
LINC00643-207ENST00000637212 HRCP23327 699 aa20.06■□□□□ 0.8
LINC00643-207ENST00000637212 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
LINC00643-207ENST00000637212 CCDC141Q6ZP82 1450 aa20.05■□□□□ 0.8
LINC00643-207ENST00000637212 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
LINC00643-207ENST00000637212 CFAP74Q9C0B2 1584 aa20.04■□□□□ 0.8
LINC00643-207ENST00000637212 ABCC1P33527 1531 aa20.04■□□□□ 0.8
LINC00643-207ENST00000637212 DNMT1P26358 1616 aaKnown RBP20.04■□□□□ 0.8
LINC00643-207ENST00000637212 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
LINC00643-207ENST00000637212 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
LINC00643-207ENST00000637212 SHANK2Q9UPX8 1470 aa20.03■□□□□ 0.8
LINC00643-207ENST00000637212 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.8
LINC00643-207ENST00000637212 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.79
LINC00643-207ENST00000637212 RTEL1-TNFRSF6BF6WH68 1400 aa20.01■□□□□ 0.79
LINC00643-207ENST00000637212 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
LINC00643-207ENST00000637212 ACIN1Q9UKV3 1341 aaKnown RBP20.01■□□□□ 0.79
LINC00643-207ENST00000637212 NCOA1Q15788 1441 aa20■□□□□ 0.79
LINC00643-207ENST00000637212 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
LINC00643-207ENST00000637212 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
LINC00643-207ENST00000637212 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
LINC00643-207ENST00000637212 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
LINC00643-207ENST00000637212 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
LINC00643-207ENST00000637212 ZNF518AQ6AHZ1 1483 aa19.97■□□□□ 0.79
LINC00643-207ENST00000637212 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
LINC00643-207ENST00000637212 POGZQ7Z3K3 1410 aa19.96■□□□□ 0.79
LINC00643-207ENST00000637212 RAPGEF3O95398 923 aa19.96■□□□□ 0.79
LINC00643-207ENST00000637212 NAIPQ13075 1403 aa19.95■□□□□ 0.78
LINC00643-207ENST00000637212 MAST1Q9Y2H9 1570 aa19.94■□□□□ 0.78
LINC00643-207ENST00000637212 KDM6BO15054 1643 aa19.93■□□□□ 0.78
LINC00643-207ENST00000637212 PPRC1Q5VV67 1664 aaKnown RBP19.92■□□□□ 0.78
LINC00643-207ENST00000637212 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
LINC00643-207ENST00000637212 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
LINC00643-207ENST00000637212 RAB3GAP2Q9H2M9 1393 aa19.9■□□□□ 0.78
LINC00643-207ENST00000637212 KIF15Q9NS87 1388 aa19.9■□□□□ 0.78
LINC00643-207ENST00000637212 CROCC2H7BZ55 1655 aa19.87■□□□□ 0.77
LINC00643-207ENST00000637212 KDM5CP41229 1560 aa19.87■□□□□ 0.77
LINC00643-207ENST00000637212 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
LINC00643-207ENST00000637212 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
LINC00643-207ENST00000637212 COL17A1Q9UMD9 1497 aaPredicted RBP19.85■□□□□ 0.77
LINC00643-207ENST00000637212 DHX29Q7Z478 1369 aaKnown RBP19.84■□□□□ 0.77
LINC00643-207ENST00000637212 ATP7AQ04656 1500 aa19.83■□□□□ 0.77
LINC00643-207ENST00000637212 ZFYVE16Q7Z3T8 1539 aa19.82■□□□□ 0.76
LINC00643-207ENST00000637212 PLXNC1O60486 1568 aa19.82■□□□□ 0.76
LINC00643-207ENST00000637212 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
LINC00643-207ENST00000637212 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
LINC00643-207ENST00000637212 ERBINQ96RT1 1412 aa19.8■□□□□ 0.76
LINC00643-207ENST00000637212 INO80Q9ULG1 1556 aaPredicted RBP19.79■□□□□ 0.76
LINC00643-207ENST00000637212 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
LINC00643-207ENST00000637212 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
LINC00643-207ENST00000637212 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
LINC00643-207ENST00000637212 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
LINC00643-207ENST00000637212 HECW2Q9P2P5 1572 aa19.77■□□□□ 0.76
LINC00643-207ENST00000637212 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
LINC00643-207ENST00000637212 A2MP01023 1474 aa19.76■□□□□ 0.75
LINC00643-207ENST00000637212 CCER1Q8TC90 406 aaPredicted RBP19.75■□□□□ 0.75
LINC00643-207ENST00000637212 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
LINC00643-207ENST00000637212 ATP10AO60312 1499 aa19.74■□□□□ 0.75
LINC00643-207ENST00000637212 KIF3BO15066 747 aa19.73■□□□□ 0.75
LINC00643-207ENST00000637212 YEATS2Q9ULM3 1422 aa19.73■□□□□ 0.75
LINC00643-207ENST00000637212 MPHOSPH9Q99550 1183 aa19.72■□□□□ 0.75
LINC00643-207ENST00000637212 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
LINC00643-207ENST00000637212 NUP155O75694 1391 aa19.7■□□□□ 0.74
LINC00643-207ENST00000637212 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
LINC00643-207ENST00000637212 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
LINC00643-207ENST00000637212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms