RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 HSCBQ8IWL3 235 aa7.03□□□□□ -1.28
SCN2A-212ENST00000636662 HOMEZQ8IX15 550 aa7.03□□□□□ -1.28
SCN2A-212ENST00000636662 PHLDB1Q86UU1 1377 aa7.03□□□□□ -1.28
SCN2A-212ENST00000636662 DYDC1Q8WWB3 177 aa7.03□□□□□ -1.28
SCN2A-212ENST00000636662 PDCL3Q9H2J4 239 aa7.03□□□□□ -1.28
SCN2A-212ENST00000636662 CCAR2Q8N163 923 aaKnown RBP7.02□□□□□ -1.28
SCN2A-212ENST00000636662 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
SCN2A-212ENST00000636662 CCDC191Q8NCU4 936 aa7.02□□□□□ -1.29
SCN2A-212ENST00000636662 A0A0G2JS52 829 aa7.02□□□□□ -1.29
SCN2A-212ENST00000636662 GPS2Q13227 327 aa7.02□□□□□ -1.29
SCN2A-212ENST00000636662 CEP164Q9UPV0 1460 aa7.01□□□□□ -1.29
SCN2A-212ENST00000636662 PDIA4P13667 645 aaKnown RBP7.01□□□□□ -1.29
SCN2A-212ENST00000636662 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
SCN2A-212ENST00000636662 RBM25P49756 843 aaKnown RBP7.01□□□□□ -1.29
SCN2A-212ENST00000636662 HSP90B1P14625 803 aaKnown RBP7.01□□□□□ -1.29
SCN2A-212ENST00000636662 HMMRO75330 724 aa7□□□□□ -1.29
SCN2A-212ENST00000636662 PDE3BQ13370 1112 aa7□□□□□ -1.29
SCN2A-212ENST00000636662 CLIP1P30622 1438 aa7□□□□□ -1.29
SCN2A-212ENST00000636662 CWC15Q9P013 229 aaKnown RBP7□□□□□ -1.29
SCN2A-212ENST00000636662 FAM13BQ9NYF5 915 aa7□□□□□ -1.29
SCN2A-212ENST00000636662 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
SCN2A-212ENST00000636662 DHX37Q8IY37 1157 aaKnown RBP6.99□□□□□ -1.29
SCN2A-212ENST00000636662 MRE11P49959 708 aa6.99□□□□□ -1.29
SCN2A-212ENST00000636662 C11orf95C9JLR9 678 aaPredicted RBP6.99□□□□□ -1.29
SCN2A-212ENST00000636662 H0YHG0 523 aa6.99□□□□□ -1.29
SCN2A-212ENST00000636662 CREBRFQ8IUR6 639 aa6.99□□□□□ -1.29
SCN2A-212ENST00000636662 ZMYND15Q9H091 742 aa6.99□□□□□ -1.29
SCN2A-212ENST00000636662 GNL2Q13823 731 aaKnown RBP6.99□□□□□ -1.29
SCN2A-212ENST00000636662 KCNJ4P48050 445 aa6.98□□□□□ -1.29
SCN2A-212ENST00000636662 TPM4P67936 248 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 AAMPQ13685 434 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 AEBP1Q8IUX7 1158 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 PDCL2Q8N4E4 241 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 ZBED9Q6R2W3 1325 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 AXDND1Q5T1B0 1012 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-212ENST00000636662 TPM3P06753 285 aa6.97□□□□□ -1.29
SCN2A-212ENST00000636662 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.29
SCN2A-212ENST00000636662 WWC1Q8IX03 1113 aa6.96□□□□□ -1.29
SCN2A-212ENST00000636662 RGS3P49796 1198 aa6.96□□□□□ -1.29
SCN2A-212ENST00000636662 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.3
SCN2A-212ENST00000636662 DIAPH3Q9NSV4 1193 aa6.96□□□□□ -1.3
SCN2A-212ENST00000636662 ROCK2O75116 1388 aaKnown RBP6.95□□□□□ -1.3
SCN2A-212ENST00000636662 CAVIN1Q6NZI2 390 aaKnown RBP6.95□□□□□ -1.3
SCN2A-212ENST00000636662 CALD1Q05682 793 aaKnown RBP6.95□□□□□ -1.3
SCN2A-212ENST00000636662 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
SCN2A-212ENST00000636662 NUDCQ9Y266 331 aa6.95□□□□□ -1.3
SCN2A-212ENST00000636662 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
SCN2A-212ENST00000636662 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
SCN2A-212ENST00000636662 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-212ENST00000636662 DHX8Q14562 1220 aaKnown RBP6.94□□□□□ -1.3
SCN2A-212ENST00000636662 KRI1Q8N9T8 703 aaKnown RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 EIF3AQ14152 1382 aaKnown RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 KIF3AQ9Y496 699 aa6.93□□□□□ -1.3
SCN2A-212ENST00000636662 BCL11BQ9C0K0 894 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 BAZ1AQ9NRL2 1556 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 CENPQQ7L2Z9 268 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 USP8P40818 1118 aa6.93□□□□□ -1.3
SCN2A-212ENST00000636662 FAM161AQ3B820 660 aa6.93□□□□□ -1.3
SCN2A-212ENST00000636662 HIRIP3Q9BW71 556 aaPredicted RBP6.93□□□□□ -1.3
SCN2A-212ENST00000636662 CDCA8Q53HL2 280 aa6.93□□□□□ -1.3
SCN2A-212ENST00000636662 CCDC173Q0VFZ6 552 aa6.92□□□□□ -1.3
SCN2A-212ENST00000636662 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
SCN2A-212ENST00000636662 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
SCN2A-212ENST00000636662 GPATCH11Q8N954 259 aa6.92□□□□□ -1.3
SCN2A-212ENST00000636662 TNNT1P13805 278 aa6.92□□□□□ -1.3
SCN2A-212ENST00000636662 FTSJ3Q8IY81 847 aaKnown RBP6.92□□□□□ -1.3
SCN2A-212ENST00000636662 DNAJC2Q99543 621 aaKnown RBP6.92□□□□□ -1.3
SCN2A-212ENST00000636662 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 GIMAP7Q8NHV1 300 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 LETM1O95202 739 aaPredicted RBP6.91□□□□□ -1.3
SCN2A-212ENST00000636662 AK7Q96M32 723 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 RUFY1Q96T51 708 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 VPS8Q8N3P4 1428 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 SEPT11Q9NVA2 429 aaKnown RBP6.91□□□□□ -1.3
SCN2A-212ENST00000636662 NGEFQ8N5V2 710 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 ABCC9O60706 1549 aa6.91□□□□□ -1.3
SCN2A-212ENST00000636662 KTN1Q86UP2 1357 aaKnown RBP6.91□□□□□ -1.3
SCN2A-212ENST00000636662 CLASRPQ8N2M8 674 aaKnown RBP6.9□□□□□ -1.3
SCN2A-212ENST00000636662 KIF16BQ96L93 1317 aa6.9□□□□□ -1.3
SCN2A-212ENST00000636662 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCN2A-212ENST00000636662 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
SCN2A-212ENST00000636662 PES1O00541 588 aaKnown RBP6.9□□□□□ -1.3
SCN2A-212ENST00000636662 PDE4AP27815 886 aa6.9□□□□□ -1.3
SCN2A-212ENST00000636662 IL27Q8NEV9 243 aa6.9□□□□□ -1.31
SCN2A-212ENST00000636662 CCNB3Q8WWL7 1395 aa6.9□□□□□ -1.31
SCN2A-212ENST00000636662 GTPBP4Q9BZE4 634 aaKnown RBP6.9□□□□□ -1.31
SCN2A-212ENST00000636662 DEF6Q9H4E7 631 aa6.9□□□□□ -1.31
SCN2A-212ENST00000636662 BAZ1BQ9UIG0 1483 aaKnown RBP6.9□□□□□ -1.31
SCN2A-212ENST00000636662 MCM5P33992 734 aa6.9□□□□□ -1.31
SCN2A-212ENST00000636662 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.31
SCN2A-212ENST00000636662 DCTN1Q14203 1278 aa6.89□□□□□ -1.31
SCN2A-212ENST00000636662 CLGNO14967 610 aa6.89□□□□□ -1.31
SCN2A-212ENST00000636662 ARGLU1Q9NWB6 273 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-212ENST00000636662 MCCP23508 829 aa6.89□□□□□ -1.31
SCN2A-212ENST00000636662 RALBP1Q15311 655 aa6.89□□□□□ -1.31
SCN2A-212ENST00000636662 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
SCN2A-212ENST00000636662 CCAR1Q8IX12 1150 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms