RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
CHRNA7-218ENST00000636647 SIN3AQ96ST3 1273 aa7.27□□□□□ -1.25
CHRNA7-218ENST00000636647 SUPT16HQ9Y5B9 1047 aaKnown RBP7.27□□□□□ -1.25
CHRNA7-218ENST00000636647 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
CHRNA7-218ENST00000636647 LRRC9Q6ZRR7 1453 aa7.26□□□□□ -1.25
CHRNA7-218ENST00000636647 P3H3Q8IVL6 736 aa7.26□□□□□ -1.25
CHRNA7-218ENST00000636647 SETD5Q9C0A6 1442 aa7.26□□□□□ -1.25
CHRNA7-218ENST00000636647 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
CHRNA7-218ENST00000636647 DAXXQ9UER7 740 aaPredicted RBP7.25□□□□□ -1.25
CHRNA7-218ENST00000636647 ASXL2Q76L83 1435 aa7.25□□□□□ -1.25
CHRNA7-218ENST00000636647 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
CHRNA7-218ENST00000636647 HSPA2P54652 639 aa7.23□□□□□ -1.25
CHRNA7-218ENST00000636647 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
CHRNA7-218ENST00000636647 ARID4BQ4LE39 1312 aaPredicted RBP7.23□□□□□ -1.25
CHRNA7-218ENST00000636647 PPRC1Q5VV67 1664 aaKnown RBP7.22□□□□□ -1.25
CHRNA7-218ENST00000636647 CFAP43Q8NDM7 1665 aa7.22□□□□□ -1.25
CHRNA7-218ENST00000636647 PTPRGP23470 1445 aa7.22□□□□□ -1.25
CHRNA7-218ENST00000636647 CERKQ8TCT0 537 aa7.22□□□□□ -1.25
CHRNA7-218ENST00000636647 CUL7Q14999 1698 aa7.22□□□□□ -1.25
CHRNA7-218ENST00000636647 PPP1R15AO75807 674 aaPredicted RBP7.21□□□□□ -1.26
CHRNA7-218ENST00000636647 FAM50AQ14320 339 aaKnown RBP7.21□□□□□ -1.26
CHRNA7-218ENST00000636647 TEX14Q8IWB6 1497 aa7.21□□□□□ -1.26
CHRNA7-218ENST00000636647 FHOD3Q2V2M9 1422 aa7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 PLB1Q6P1J6 1458 aa7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 DDX10Q13206 875 aaKnown RBP7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 MAPK8IP2Q13387 824 aaPredicted RBP7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 TSHZ2Q9NRE2 1034 aa7.2□□□□□ -1.26
CHRNA7-218ENST00000636647 ABCC2Q92887 1545 aa7.18□□□□□ -1.26
CHRNA7-218ENST00000636647 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
CHRNA7-218ENST00000636647 PTPRKQ15262 1439 aa7.18□□□□□ -1.26
CHRNA7-218ENST00000636647 SRCAPQ6ZRS2 3230 aa7.18□□□□□ -1.26
CHRNA7-218ENST00000636647 PTPRMP28827 1452 aa7.17□□□□□ -1.26
CHRNA7-218ENST00000636647 CASKIN1Q8WXD9 1431 aa7.17□□□□□ -1.26
CHRNA7-218ENST00000636647 GLI2P10070 1586 aa7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 LRRIQ1Q96JM4 1722 aa7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 HOXD11P31277 338 aaPredicted RBP7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 TIMELESSQ9UNS1 1208 aa7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 EPRSP07814 1512 aaKnown RBP7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 MAP3K4Q9Y6R4 1608 aa7.16□□□□□ -1.26
CHRNA7-218ENST00000636647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.26
CHRNA7-218ENST00000636647 FYCO1Q9BQS8 1478 aa7.15□□□□□ -1.27
CHRNA7-218ENST00000636647 ARID3CA6NKF2 412 aa7.14□□□□□ -1.27
CHRNA7-218ENST00000636647 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
CHRNA7-218ENST00000636647 CTTNBP2Q8WZ74 1663 aa7.14□□□□□ -1.27
CHRNA7-218ENST00000636647 ARXQ96QS3 562 aa7.14□□□□□ -1.27
CHRNA7-218ENST00000636647 EFCAB5A4FU69 1503 aa7.13□□□□□ -1.27
CHRNA7-218ENST00000636647 KIAA0586Q9BVV6 1533 aa7.13□□□□□ -1.27
CHRNA7-218ENST00000636647 FBXO3Q9UK99 471 aa7.13□□□□□ -1.27
CHRNA7-218ENST00000636647 KDM2AQ9Y2K7 1162 aa7.13□□□□□ -1.27
CHRNA7-218ENST00000636647 KDM5BQ9UGL1 1544 aa7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 FGD6Q6ZV73 1430 aa7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 MLECQ14165 292 aa7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 ZCCHC11Q5TAX3 1644 aaKnown RBP7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 MADDQ8WXG6 1647 aa7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 PTPN23Q9H3S7 1636 aa7.12□□□□□ -1.27
CHRNA7-218ENST00000636647 CD109Q6YHK3 1445 aa7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 UACAQ9BZF9 1416 aa7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 CCER2I3L3R5 266 aa7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 RIMS1Q86UR5 1692 aaKnown RBP7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 SAMD9Q5K651 1589 aa7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 CCDC18Q5T9S5 1454 aa7.11□□□□□ -1.27
CHRNA7-218ENST00000636647 MAGI3Q5TCQ9 1506 aa7.1□□□□□ -1.27
CHRNA7-218ENST00000636647 NAIPQ13075 1403 aa7.1□□□□□ -1.27
CHRNA7-218ENST00000636647 DENND4BO75064 1496 aaPredicted RBP7.09□□□□□ -1.27
CHRNA7-218ENST00000636647 NCOA2Q15596 1464 aa7.09□□□□□ -1.27
CHRNA7-218ENST00000636647 WDR7Q9Y4E6 1490 aa7.09□□□□□ -1.27
CHRNA7-218ENST00000636647 HFM1A2PYH4 1435 aa7.09□□□□□ -1.28
CHRNA7-218ENST00000636647 RAPGEF3O95398 923 aa7.08□□□□□ -1.28
CHRNA7-218ENST00000636647 TRIM52Q96A61 297 aa7.08□□□□□ -1.28
CHRNA7-218ENST00000636647 ADAMTSL3P82987 1691 aa7.08□□□□□ -1.28
CHRNA7-218ENST00000636647 FMN1Q68DA7 1419 aa7.08□□□□□ -1.28
CHRNA7-218ENST00000636647 TULP1O00294 542 aaPredicted RBP7.07□□□□□ -1.28
CHRNA7-218ENST00000636647 ANP32CO43423 234 aa7.07□□□□□ -1.28
CHRNA7-218ENST00000636647 MYOM3Q5VTT5 1437 aa7.07□□□□□ -1.28
CHRNA7-218ENST00000636647 MTUS2Q5JR59 1369 aa7.07□□□□□ -1.28
CHRNA7-218ENST00000636647 TONSLQ96HA7 1378 aa7.07□□□□□ -1.28
CHRNA7-218ENST00000636647 UGGT2Q9NYU1 1516 aa7.06□□□□□ -1.28
CHRNA7-218ENST00000636647 UHRF1BP1LA0JNW5 1464 aa7.06□□□□□ -1.28
CHRNA7-218ENST00000636647 PKD2Q13563 968 aa7.06□□□□□ -1.28
CHRNA7-218ENST00000636647 RRP7BPQ9NSQ0 103 aa7.06□□□□□ -1.28
CHRNA7-218ENST00000636647 ATF5Q9Y2D1 282 aaPredicted RBP7.06□□□□□ -1.28
CHRNA7-218ENST00000636647 BCORL1Q5H9F3 1711 aa7.05□□□□□ -1.28
CHRNA7-218ENST00000636647 IQGAP2Q13576 1575 aa7.05□□□□□ -1.28
CHRNA7-218ENST00000636647 VASPP50552 380 aaPredicted RBP7.05□□□□□ -1.28
CHRNA7-218ENST00000636647 CHIC2Q9UKJ5 165 aa7.05□□□□□ -1.28
CHRNA7-218ENST00000636647 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 SUPT6HQ7KZ85 1726 aaKnown RBP7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 HSPA5P11021 654 aaKnown RBP7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 CCDC184Q52MB2 194 aa7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 ANP32EQ9BTT0 268 aa7.04□□□□□ -1.28
CHRNA7-218ENST00000636647 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
CHRNA7-218ENST00000636647 EHBP1L1Q8N3D4 1523 aa7.03□□□□□ -1.28
CHRNA7-218ENST00000636647 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
CHRNA7-218ENST00000636647 MSH5O43196 834 aa7.02□□□□□ -1.29
CHRNA7-218ENST00000636647 PROM2Q8N271 834 aa7.02□□□□□ -1.29
CHRNA7-218ENST00000636647 BBXQ8WY36 941 aaPredicted RBP7.02□□□□□ -1.29
CHRNA7-218ENST00000636647 RBM19Q9Y4C8 960 aaKnown RBP7.02□□□□□ -1.29
CHRNA7-218ENST00000636647 DMRT2Q9Y5R5 561 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms