RNA–Protein interactions for RNA: ENST00000636629.1

CACNA1D-215, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2

Gene CACNA1D, Length 1,749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-215ENST00000636629 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
CACNA1D-215ENST00000636629 PLCH2O75038 1416 aa21.45■■□□□ 1.02
CACNA1D-215ENST00000636629 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
CACNA1D-215ENST00000636629 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.02
CACNA1D-215ENST00000636629 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
CACNA1D-215ENST00000636629 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
CACNA1D-215ENST00000636629 ABCA9Q8IUA7 1624 aa21.42■■□□□ 1.02
CACNA1D-215ENST00000636629 CDC42BPBQ9Y5S2 1711 aa21.42■■□□□ 1.02
CACNA1D-215ENST00000636629 HNRNPMP52272 730 aaKnown RBP eCLIP21.42■■□□□ 1.02
CACNA1D-215ENST00000636629 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
CACNA1D-215ENST00000636629 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
CACNA1D-215ENST00000636629 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
CACNA1D-215ENST00000636629 MYO5CQ9NQX4 1742 aa21.4■■□□□ 1.02
CACNA1D-215ENST00000636629 CD109Q6YHK3 1445 aa21.39■■□□□ 1.02
CACNA1D-215ENST00000636629 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
CACNA1D-215ENST00000636629 ABCC5O15440 1437 aa21.37■■□□□ 1.01
CACNA1D-215ENST00000636629 DAPK1P53355 1430 aa21.35■■□□□ 1.01
CACNA1D-215ENST00000636629 FANCAO15360 1455 aa21.33■■□□□ 1.01
CACNA1D-215ENST00000636629 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
CACNA1D-215ENST00000636629 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
CACNA1D-215ENST00000636629 MBD5Q9P267 1494 aa21.31■■□□□ 1
CACNA1D-215ENST00000636629 ARHGEF12Q9NZN5 1544 aa21.31■■□□□ 1
CACNA1D-215ENST00000636629 SYCP2Q9BX26 1530 aa21.31■■□□□ 1
CACNA1D-215ENST00000636629 GLI2P10070 1586 aa21.3■■□□□ 1
CACNA1D-215ENST00000636629 DNMT1P26358 1616 aaKnown RBP21.3■■□□□ 1
CACNA1D-215ENST00000636629 ARAP3Q8WWN8 1544 aa21.3■■□□□ 1
CACNA1D-215ENST00000636629 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
CACNA1D-215ENST00000636629 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
CACNA1D-215ENST00000636629 KIAA1107Q9UPP5 1409 aa21.26■□□□□ 0.99
CACNA1D-215ENST00000636629 TRAPPC8Q9Y2L5 1435 aa21.26■□□□□ 0.99
CACNA1D-215ENST00000636629 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
CACNA1D-215ENST00000636629 ABCC1P33527 1531 aa21.25■□□□□ 0.99
CACNA1D-215ENST00000636629 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
CACNA1D-215ENST00000636629 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
CACNA1D-215ENST00000636629 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
CACNA1D-215ENST00000636629 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
CACNA1D-215ENST00000636629 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
CACNA1D-215ENST00000636629 ADGRL1O94910 1474 aa21.24■□□□□ 0.99
CACNA1D-215ENST00000636629 CCDC141Q6ZP82 1450 aa21.24■□□□□ 0.99
CACNA1D-215ENST00000636629 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
CACNA1D-215ENST00000636629 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
CACNA1D-215ENST00000636629 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
CACNA1D-215ENST00000636629 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
CACNA1D-215ENST00000636629 TRHP20396 242 aaPredicted RBP21.21■□□□□ 0.99
CACNA1D-215ENST00000636629 NAIPQ13075 1403 aa21.21■□□□□ 0.99
CACNA1D-215ENST00000636629 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
CACNA1D-215ENST00000636629 ROCK1Q13464 1354 aa21.19■□□□□ 0.98
CACNA1D-215ENST00000636629 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
CACNA1D-215ENST00000636629 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
CACNA1D-215ENST00000636629 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
CACNA1D-215ENST00000636629 TSPOAP1O95153 1857 aa21.17■□□□□ 0.98
CACNA1D-215ENST00000636629 NEO1Q92859 1461 aa21.17■□□□□ 0.98
CACNA1D-215ENST00000636629 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
CACNA1D-215ENST00000636629 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
CACNA1D-215ENST00000636629 RAPGEF3O95398 923 aa21.16■□□□□ 0.98
CACNA1D-215ENST00000636629 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
CACNA1D-215ENST00000636629 MYT1LQ9UL68 1186 aa21.15■□□□□ 0.98
CACNA1D-215ENST00000636629 CFAP74Q9C0B2 1584 aa21.15■□□□□ 0.98
CACNA1D-215ENST00000636629 ADGRL2O95490 1459 aa21.14■□□□□ 0.97
CACNA1D-215ENST00000636629 CCER1Q8TC90 406 aaPredicted RBP21.14■□□□□ 0.97
CACNA1D-215ENST00000636629 PPRC1Q5VV67 1664 aaKnown RBP21.13■□□□□ 0.97
CACNA1D-215ENST00000636629 KDM6BO15054 1643 aa21.12■□□□□ 0.97
CACNA1D-215ENST00000636629 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
CACNA1D-215ENST00000636629 POGZQ7Z3K3 1410 aa21.1■□□□□ 0.97
CACNA1D-215ENST00000636629 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
CACNA1D-215ENST00000636629 DENND4BO75064 1496 aaPredicted RBP21.1■□□□□ 0.97
CACNA1D-215ENST00000636629 TEX14Q8IWB6 1497 aa21.1■□□□□ 0.97
CACNA1D-215ENST00000636629 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
CACNA1D-215ENST00000636629 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
CACNA1D-215ENST00000636629 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
CACNA1D-215ENST00000636629 HRCP23327 699 aa21.06■□□□□ 0.96
CACNA1D-215ENST00000636629 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
CACNA1D-215ENST00000636629 RTEL1-TNFRSF6BF6WH68 1400 aa21.04■□□□□ 0.96
CACNA1D-215ENST00000636629 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
CACNA1D-215ENST00000636629 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
CACNA1D-215ENST00000636629 DHX57Q6P158 1386 aaKnown RBP21.04■□□□□ 0.96
CACNA1D-215ENST00000636629 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
CACNA1D-215ENST00000636629 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
CACNA1D-215ENST00000636629 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
CACNA1D-215ENST00000636629 KDM5CP41229 1560 aa21■□□□□ 0.95
CACNA1D-215ENST00000636629 PLXNC1O60486 1568 aa21■□□□□ 0.95
CACNA1D-215ENST00000636629 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
CACNA1D-215ENST00000636629 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
CACNA1D-215ENST00000636629 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
CACNA1D-215ENST00000636629 RICTORQ6R327 1708 aa20.97■□□□□ 0.95
CACNA1D-215ENST00000636629 KIDINS220Q9ULH0 1771 aa20.97■□□□□ 0.95
CACNA1D-215ENST00000636629 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
CACNA1D-215ENST00000636629 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.94
CACNA1D-215ENST00000636629 HECW2Q9P2P5 1572 aa20.95■□□□□ 0.94
CACNA1D-215ENST00000636629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.95■□□□□ 0.94
CACNA1D-215ENST00000636629 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
CACNA1D-215ENST00000636629 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
CACNA1D-215ENST00000636629 ERBINQ96RT1 1412 aa20.91■□□□□ 0.94
CACNA1D-215ENST00000636629 NUP155O75694 1391 aa20.91■□□□□ 0.94
CACNA1D-215ENST00000636629 KIF3BO15066 747 aa20.9■□□□□ 0.94
CACNA1D-215ENST00000636629 FOXD1Q16676 465 aa20.9■□□□□ 0.94
CACNA1D-215ENST00000636629 ABCA6Q8N139 1617 aa20.9■□□□□ 0.94
CACNA1D-215ENST00000636629 A2MP01023 1474 aa20.89■□□□□ 0.94
CACNA1D-215ENST00000636629 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
CACNA1D-215ENST00000636629 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms