RNA–Protein interactions for RNA: ENST00000636241.1

CLCN2-211, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,010 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-211ENST00000636241 CDC42BPAQ5VT25 1732 aa24.7■■□□□ 1.54
CLCN2-211ENST00000636241 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
CLCN2-211ENST00000636241 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
CLCN2-211ENST00000636241 ZNF644Q9H582 1327 aaPredicted RBP24.68■■□□□ 1.54
CLCN2-211ENST00000636241 CROCC2H7BZ55 1655 aa24.68■■□□□ 1.54
CLCN2-211ENST00000636241 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
CLCN2-211ENST00000636241 CFDP1Q9UEE9 299 aaPredicted RBP24.66■■□□□ 1.54
CLCN2-211ENST00000636241 ADGBQ8N7X0 1667 aa24.65■■□□□ 1.54
CLCN2-211ENST00000636241 ABCC2Q92887 1545 aa24.63■■□□□ 1.53
CLCN2-211ENST00000636241 NEUROD1Q13562 356 aa24.62■■□□□ 1.53
CLCN2-211ENST00000636241 DENND4BO75064 1496 aaPredicted RBP24.62■■□□□ 1.53
CLCN2-211ENST00000636241 ADGRL2O95490 1459 aa24.61■■□□□ 1.53
CLCN2-211ENST00000636241 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
CLCN2-211ENST00000636241 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
CLCN2-211ENST00000636241 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
CLCN2-211ENST00000636241 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
CLCN2-211ENST00000636241 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
CLCN2-211ENST00000636241 TONSLQ96HA7 1378 aa24.52■■□□□ 1.52
CLCN2-211ENST00000636241 UHRF1BP1LA0JNW5 1464 aa24.51■■□□□ 1.51
CLCN2-211ENST00000636241 ARHGEF5Q12774 1597 aa24.5■■□□□ 1.51
CLCN2-211ENST00000636241 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
CLCN2-211ENST00000636241 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
CLCN2-211ENST00000636241 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
CLCN2-211ENST00000636241 CDC42BPBQ9Y5S2 1711 aa24.5■■□□□ 1.51
CLCN2-211ENST00000636241 KDM5BQ9UGL1 1544 aa24.48■■□□□ 1.51
CLCN2-211ENST00000636241 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
CLCN2-211ENST00000636241 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
CLCN2-211ENST00000636241 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
CLCN2-211ENST00000636241 ZCCHC11Q5TAX3 1644 aaKnown RBP24.46■■□□□ 1.51
CLCN2-211ENST00000636241 ANKRD30AQ9BXX3 1397 aa24.46■■□□□ 1.51
CLCN2-211ENST00000636241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
CLCN2-211ENST00000636241 MIER1Q8N108 512 aa24.44■■□□□ 1.5
CLCN2-211ENST00000636241 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
CLCN2-211ENST00000636241 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
CLCN2-211ENST00000636241 PZPP20742 1482 aa24.4■■□□□ 1.5
CLCN2-211ENST00000636241 MYO5CQ9NQX4 1742 aa24.4■■□□□ 1.5
CLCN2-211ENST00000636241 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
CLCN2-211ENST00000636241 CCDC141Q6ZP82 1450 aa24.39■■□□□ 1.49
CLCN2-211ENST00000636241 ANKRD50Q9ULJ7 1429 aa24.37■■□□□ 1.49
CLCN2-211ENST00000636241 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
CLCN2-211ENST00000636241 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
CLCN2-211ENST00000636241 ARHGAP5Q13017 1502 aa24.36■■□□□ 1.49
CLCN2-211ENST00000636241 SYCP2Q9BX26 1530 aa24.34■■□□□ 1.49
CLCN2-211ENST00000636241 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
CLCN2-211ENST00000636241 MAST1Q9Y2H9 1570 aa24.33■■□□□ 1.49
CLCN2-211ENST00000636241 KDM5DQ9BY66 1539 aa24.32■■□□□ 1.48
CLCN2-211ENST00000636241 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
CLCN2-211ENST00000636241 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
CLCN2-211ENST00000636241 SLC4A1APQ9BWU0 796 aaKnown RBP24.3■■□□□ 1.48
CLCN2-211ENST00000636241 PLEKHH2Q8IVE3 1493 aa24.3■■□□□ 1.48
CLCN2-211ENST00000636241 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLCN2-211ENST00000636241 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
CLCN2-211ENST00000636241 KIF15Q9NS87 1388 aa24.29■■□□□ 1.48
CLCN2-211ENST00000636241 KIAA1107Q9UPP5 1409 aa24.29■■□□□ 1.48
CLCN2-211ENST00000636241 FOXD1Q16676 465 aa24.28■■□□□ 1.48
CLCN2-211ENST00000636241 TEX14Q8IWB6 1497 aa24.27■■□□□ 1.48
CLCN2-211ENST00000636241 PLCH2O75038 1416 aa24.26■■□□□ 1.47
CLCN2-211ENST00000636241 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
CLCN2-211ENST00000636241 ARAP3Q8WWN8 1544 aa24.22■■□□□ 1.47
CLCN2-211ENST00000636241 ABCC1P33527 1531 aa24.21■■□□□ 1.47
CLCN2-211ENST00000636241 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
CLCN2-211ENST00000636241 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
CLCN2-211ENST00000636241 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
CLCN2-211ENST00000636241 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
CLCN2-211ENST00000636241 NUP155O75694 1391 aa24.17■■□□□ 1.46
CLCN2-211ENST00000636241 UNC13BO14795 1591 aa24.15■■□□□ 1.46
CLCN2-211ENST00000636241 PKD2Q13563 968 aa24.14■■□□□ 1.45
CLCN2-211ENST00000636241 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
CLCN2-211ENST00000636241 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
CLCN2-211ENST00000636241 EFCAB2Q5VUJ9 269 aa24.11■■□□□ 1.45
CLCN2-211ENST00000636241 HIRIP3Q9BW71 556 aaPredicted RBP24.11■■□□□ 1.45
CLCN2-211ENST00000636241 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
CLCN2-211ENST00000636241 DUOX2Q9NRD8 1548 aa24.1■■□□□ 1.45
CLCN2-211ENST00000636241 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
CLCN2-211ENST00000636241 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
CLCN2-211ENST00000636241 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
CLCN2-211ENST00000636241 ERBINQ96RT1 1412 aa24.06■■□□□ 1.44
CLCN2-211ENST00000636241 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
CLCN2-211ENST00000636241 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
CLCN2-211ENST00000636241 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
CLCN2-211ENST00000636241 ASXL2Q76L83 1435 aa24.04■■□□□ 1.44
CLCN2-211ENST00000636241 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
CLCN2-211ENST00000636241 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
CLCN2-211ENST00000636241 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
CLCN2-211ENST00000636241 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.43
CLCN2-211ENST00000636241 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
CLCN2-211ENST00000636241 FANCAO15360 1455 aa24■■□□□ 1.43
CLCN2-211ENST00000636241 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
CLCN2-211ENST00000636241 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
CLCN2-211ENST00000636241 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.42
CLCN2-211ENST00000636241 SPAG9O60271 1321 aaKnown RBP23.91■■□□□ 1.42
CLCN2-211ENST00000636241 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
CLCN2-211ENST00000636241 POLR1AO95602 1720 aaPredicted RBP23.91■■□□□ 1.42
CLCN2-211ENST00000636241 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
CLCN2-211ENST00000636241 ADGRL1O94910 1474 aa23.91■■□□□ 1.42
CLCN2-211ENST00000636241 RALGAPBQ86X10 1494 aa23.89■■□□□ 1.42
CLCN2-211ENST00000636241 PLA2R1Q13018 1463 aa23.89■■□□□ 1.41
CLCN2-211ENST00000636241 DEPDC5O75140 1603 aa23.89■■□□□ 1.41
CLCN2-211ENST00000636241 ATP10AO60312 1499 aa23.88■■□□□ 1.41
CLCN2-211ENST00000636241 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms