RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
CLN5-208ENST00000636183 CHMP4BQ9H444 224 aaKnown RBP20.61■□□□□ 0.89
CLN5-208ENST00000636183 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
CLN5-208ENST00000636183 EID1Q9Y6B2 187 aa20.59■□□□□ 0.89
CLN5-208ENST00000636183 WWC1Q8IX03 1113 aa20.58■□□□□ 0.89
CLN5-208ENST00000636183 TMF1P82094 1093 aa20.58■□□□□ 0.89
CLN5-208ENST00000636183 LTV1Q96GA3 475 aaPredicted RBP20.58■□□□□ 0.89
CLN5-208ENST00000636183 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.88
CLN5-208ENST00000636183 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.88
CLN5-208ENST00000636183 EVA1CP58658 441 aa20.58■□□□□ 0.88
CLN5-208ENST00000636183 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
CLN5-208ENST00000636183 CWC22Q9HCG8 908 aaKnown RBP20.54■□□□□ 0.88
CLN5-208ENST00000636183 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
CLN5-208ENST00000636183 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
CLN5-208ENST00000636183 RAD21O60216 631 aa20.53■□□□□ 0.88
CLN5-208ENST00000636183 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
CLN5-208ENST00000636183 MS4A1P11836 297 aa20.52■□□□□ 0.88
CLN5-208ENST00000636183 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.87
CLN5-208ENST00000636183 MCCP23508 829 aa20.52■□□□□ 0.87
CLN5-208ENST00000636183 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
CLN5-208ENST00000636183 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
CLN5-208ENST00000636183 NRDCO43847 1150 aa20.51■□□□□ 0.87
CLN5-208ENST00000636183 FBXW7Q969H0 707 aa20.5■□□□□ 0.87
CLN5-208ENST00000636183 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
CLN5-208ENST00000636183 DRC7Q8IY82 874 aa20.48■□□□□ 0.87
CLN5-208ENST00000636183 TOMM22Q9NS69 142 aa20.48■□□□□ 0.87
CLN5-208ENST00000636183 MIER1Q8N108 512 aa20.48■□□□□ 0.87
CLN5-208ENST00000636183 KIAA1211Q6ZU35 1233 aa20.48■□□□□ 0.87
CLN5-208ENST00000636183 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
CLN5-208ENST00000636183 MARCH6O60337 910 aa20.46■□□□□ 0.87
CLN5-208ENST00000636183 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
CLN5-208ENST00000636183 RASSF8Q8NHQ8 419 aa20.46■□□□□ 0.87
CLN5-208ENST00000636183 CTDP1Q9Y5B0 961 aaPredicted RBP20.45■□□□□ 0.86
CLN5-208ENST00000636183 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
CLN5-208ENST00000636183 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
CLN5-208ENST00000636183 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
CLN5-208ENST00000636183 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
CLN5-208ENST00000636183 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
CLN5-208ENST00000636183 AMPHP49418 695 aa20.42■□□□□ 0.86
CLN5-208ENST00000636183 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
CLN5-208ENST00000636183 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
CLN5-208ENST00000636183 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
CLN5-208ENST00000636183 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
CLN5-208ENST00000636183 U2AF1L5P0DN76 240 aaPredicted RBP20.39■□□□□ 0.86
CLN5-208ENST00000636183 U2AF1Q01081 240 aaKnown RBP eCLIP20.39■□□□□ 0.86
CLN5-208ENST00000636183 SPAG9O60271 1321 aaKnown RBP20.39■□□□□ 0.85
CLN5-208ENST00000636183 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
CLN5-208ENST00000636183 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
CLN5-208ENST00000636183 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
CLN5-208ENST00000636183 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
CLN5-208ENST00000636183 KIF3BO15066 747 aa20.35■□□□□ 0.85
CLN5-208ENST00000636183 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
CLN5-208ENST00000636183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLN5-208ENST00000636183 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
CLN5-208ENST00000636183 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
CLN5-208ENST00000636183 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
CLN5-208ENST00000636183 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
CLN5-208ENST00000636183 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
CLN5-208ENST00000636183 ITPRIPQ8IWB1 547 aa20.31■□□□□ 0.84
CLN5-208ENST00000636183 FOXD1Q16676 465 aa20.3■□□□□ 0.84
CLN5-208ENST00000636183 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
CLN5-208ENST00000636183 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
CLN5-208ENST00000636183 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
CLN5-208ENST00000636183 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
CLN5-208ENST00000636183 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
CLN5-208ENST00000636183 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
CLN5-208ENST00000636183 CEP89Q96ST8 783 aa20.28■□□□□ 0.84
CLN5-208ENST00000636183 A0A0U1RQG5 324 aaPredicted RBP20.28■□□□□ 0.84
CLN5-208ENST00000636183 PKD2Q13563 968 aa20.28■□□□□ 0.84
CLN5-208ENST00000636183 NAP1L5Q96NT1 182 aaPredicted RBP20.28■□□□□ 0.84
CLN5-208ENST00000636183 CARMIL2Q6F5E8 1435 aa20.26■□□□□ 0.83
CLN5-208ENST00000636183 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
CLN5-208ENST00000636183 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
CLN5-208ENST00000636183 NOL10Q9BSC4 688 aaKnown RBP20.23■□□□□ 0.83
CLN5-208ENST00000636183 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
CLN5-208ENST00000636183 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
CLN5-208ENST00000636183 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
CLN5-208ENST00000636183 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
CLN5-208ENST00000636183 ROCK2O75116 1388 aaKnown RBP20.19■□□□□ 0.82
CLN5-208ENST00000636183 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
CLN5-208ENST00000636183 PES1O00541 588 aaKnown RBP20.18■□□□□ 0.82
CLN5-208ENST00000636183 CUX2O14529 1486 aa20.18■□□□□ 0.82
CLN5-208ENST00000636183 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
CLN5-208ENST00000636183 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
CLN5-208ENST00000636183 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
CLN5-208ENST00000636183 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
CLN5-208ENST00000636183 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
CLN5-208ENST00000636183 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
CLN5-208ENST00000636183 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
CLN5-208ENST00000636183 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
CLN5-208ENST00000636183 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
CLN5-208ENST00000636183 EEA1Q15075 1411 aa20.13■□□□□ 0.81
CLN5-208ENST00000636183 SMC4Q9NTJ3 1288 aa20.12■□□□□ 0.81
CLN5-208ENST00000636183 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
CLN5-208ENST00000636183 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
CLN5-208ENST00000636183 CCDC34Q96HJ3 373 aa20.12■□□□□ 0.81
CLN5-208ENST00000636183 PSME1Q06323 249 aa20.12■□□□□ 0.81
CLN5-208ENST00000636183 TPM4P67936 248 aa20.12■□□□□ 0.81
CLN5-208ENST00000636183 RTN4Q9NQC3 1192 aaKnown RBP20.12■□□□□ 0.81
CLN5-208ENST00000636183 NUP155O75694 1391 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms