RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 ITSN2Q9NZM3 1697 aa26.16■■□□□ 1.78
CLN5-206ENST00000635915 DNMT1P26358 1616 aaKnown RBP26.16■■□□□ 1.78
CLN5-206ENST00000635915 GCC2Q8IWJ2 1684 aa26.15■■□□□ 1.78
CLN5-206ENST00000635915 ABCC10Q5T3U5 1492 aa26.14■■□□□ 1.77
CLN5-206ENST00000635915 AKNAQ7Z591 1439 aa26.12■■□□□ 1.77
CLN5-206ENST00000635915 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
CLN5-206ENST00000635915 ABCC2Q92887 1545 aa26.08■■□□□ 1.77
CLN5-206ENST00000635915 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
CLN5-206ENST00000635915 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
CLN5-206ENST00000635915 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
CLN5-206ENST00000635915 KCNH8Q96L42 1107 aa25.97■■□□□ 1.75
CLN5-206ENST00000635915 NCOA1Q15788 1441 aa25.96■■□□□ 1.75
CLN5-206ENST00000635915 CROCC2H7BZ55 1655 aa25.96■■□□□ 1.75
CLN5-206ENST00000635915 TTC37Q6PGP7 1564 aa25.94■■□□□ 1.74
CLN5-206ENST00000635915 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
CLN5-206ENST00000635915 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
CLN5-206ENST00000635915 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
CLN5-206ENST00000635915 ZCCHC11Q5TAX3 1644 aaKnown RBP25.93■■□□□ 1.74
CLN5-206ENST00000635915 FOXD1Q16676 465 aa25.93■■□□□ 1.74
CLN5-206ENST00000635915 ADGBQ8N7X0 1667 aa25.92■■□□□ 1.74
CLN5-206ENST00000635915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.92■■□□□ 1.74
CLN5-206ENST00000635915 TIMELESSQ9UNS1 1208 aa25.91■■□□□ 1.74
CLN5-206ENST00000635915 PREX2Q70Z35 1606 aa25.91■■□□□ 1.74
CLN5-206ENST00000635915 UHRF1BP1LA0JNW5 1464 aa25.91■■□□□ 1.74
CLN5-206ENST00000635915 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
CLN5-206ENST00000635915 ADGRL2O95490 1459 aa25.89■■□□□ 1.74
CLN5-206ENST00000635915 PPP1R15AO75807 674 aaPredicted RBP25.89■■□□□ 1.73
CLN5-206ENST00000635915 KDM5BQ9UGL1 1544 aa25.89■■□□□ 1.73
CLN5-206ENST00000635915 SAMD9LQ8IVG5 1584 aa25.89■■□□□ 1.73
CLN5-206ENST00000635915 ANKRD30AQ9BXX3 1397 aa25.88■■□□□ 1.73
CLN5-206ENST00000635915 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
CLN5-206ENST00000635915 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
CLN5-206ENST00000635915 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
CLN5-206ENST00000635915 ARHGAP5Q13017 1502 aa25.85■■□□□ 1.73
CLN5-206ENST00000635915 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
CLN5-206ENST00000635915 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
CLN5-206ENST00000635915 SLC4A1APQ9BWU0 796 aaKnown RBP25.82■■□□□ 1.72
CLN5-206ENST00000635915 SHANK2Q9UPX8 1470 aa25.82■■□□□ 1.72
CLN5-206ENST00000635915 MIER1Q8N108 512 aa25.81■■□□□ 1.72
CLN5-206ENST00000635915 ANKRD50Q9ULJ7 1429 aa25.8■■□□□ 1.72
CLN5-206ENST00000635915 ARHGEF5Q12774 1597 aa25.8■■□□□ 1.72
CLN5-206ENST00000635915 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
CLN5-206ENST00000635915 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
CLN5-206ENST00000635915 CCDC141Q6ZP82 1450 aa25.77■■□□□ 1.72
CLN5-206ENST00000635915 PZPP20742 1482 aa25.77■■□□□ 1.72
CLN5-206ENST00000635915 KIF15Q9NS87 1388 aa25.75■■□□□ 1.71
CLN5-206ENST00000635915 ANKRD30BQ9BXX2 1392 aa25.74■■□□□ 1.71
CLN5-206ENST00000635915 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
CLN5-206ENST00000635915 HIRIP3Q9BW71 556 aaPredicted RBP25.73■■□□□ 1.71
CLN5-206ENST00000635915 PLCH2O75038 1416 aa25.71■■□□□ 1.71
CLN5-206ENST00000635915 ARHGEF12Q9NZN5 1544 aa25.69■■□□□ 1.7
CLN5-206ENST00000635915 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
CLN5-206ENST00000635915 WDR7Q9Y4E6 1490 aa25.67■■□□□ 1.7
CLN5-206ENST00000635915 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
CLN5-206ENST00000635915 NUP155O75694 1391 aa25.66■■□□□ 1.7
CLN5-206ENST00000635915 PKD2Q13563 968 aa25.66■■□□□ 1.7
CLN5-206ENST00000635915 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
CLN5-206ENST00000635915 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
CLN5-206ENST00000635915 PLEKHH2Q8IVE3 1493 aa25.63■■□□□ 1.69
CLN5-206ENST00000635915 RPRD2Q5VT52 1461 aaKnown RBP25.63■■□□□ 1.69
CLN5-206ENST00000635915 ASXL2Q76L83 1435 aa25.6■■□□□ 1.69
CLN5-206ENST00000635915 MAST1Q9Y2H9 1570 aa25.58■■□□□ 1.69
CLN5-206ENST00000635915 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.68
CLN5-206ENST00000635915 ABCC1P33527 1531 aa25.58■■□□□ 1.68
CLN5-206ENST00000635915 TEX14Q8IWB6 1497 aa25.55■■□□□ 1.68
CLN5-206ENST00000635915 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
CLN5-206ENST00000635915 KDM5DQ9BY66 1539 aa25.53■■□□□ 1.68
CLN5-206ENST00000635915 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
CLN5-206ENST00000635915 AFAP1Q8N556 730 aa25.53■■□□□ 1.68
CLN5-206ENST00000635915 NPM1P06748 294 aaKnown RBP eCLIP25.52■■□□□ 1.68
CLN5-206ENST00000635915 PLXNC1O60486 1568 aa25.51■■□□□ 1.67
CLN5-206ENST00000635915 ABCA9Q8IUA7 1624 aa25.51■■□□□ 1.67
CLN5-206ENST00000635915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
CLN5-206ENST00000635915 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
CLN5-206ENST00000635915 FANCAO15360 1455 aa25.49■■□□□ 1.67
CLN5-206ENST00000635915 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
CLN5-206ENST00000635915 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
CLN5-206ENST00000635915 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
CLN5-206ENST00000635915 DUOX2Q9NRD8 1548 aa25.44■■□□□ 1.66
CLN5-206ENST00000635915 HSPA5P11021 654 aaKnown RBP25.42■■□□□ 1.66
CLN5-206ENST00000635915 UNC13BO14795 1591 aa25.41■■□□□ 1.66
CLN5-206ENST00000635915 ADGRL1O94910 1474 aa25.39■■□□□ 1.66
CLN5-206ENST00000635915 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.66
CLN5-206ENST00000635915 ZFYVE16Q7Z3T8 1539 aa25.39■■□□□ 1.65
CLN5-206ENST00000635915 ERBINQ96RT1 1412 aa25.38■■□□□ 1.65
CLN5-206ENST00000635915 ZNF326Q5BKZ1 582 aaKnown RBP25.37■■□□□ 1.65
CLN5-206ENST00000635915 CENPBP07199 599 aaPredicted RBP25.36■■□□□ 1.65
CLN5-206ENST00000635915 EIF4G2P78344 907 aaKnown RBP eCLIP25.36■■□□□ 1.65
CLN5-206ENST00000635915 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
CLN5-206ENST00000635915 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
CLN5-206ENST00000635915 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
CLN5-206ENST00000635915 IQGAP3Q86VI3 1631 aa25.32■■□□□ 1.64
CLN5-206ENST00000635915 CD109Q6YHK3 1445 aa25.31■■□□□ 1.64
CLN5-206ENST00000635915 ATP7AQ04656 1500 aa25.31■■□□□ 1.64
CLN5-206ENST00000635915 MAGI2Q86UL8 1455 aa25.3■■□□□ 1.64
CLN5-206ENST00000635915 PLA2R1Q13018 1463 aa25.29■■□□□ 1.64
CLN5-206ENST00000635915 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
CLN5-206ENST00000635915 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
CLN5-206ENST00000635915 WASHC2AQ641Q2 1341 aa25.28■■□□□ 1.64
CLN5-206ENST00000635915 CCDC144AA2RUR9 1427 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms