RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CDKL5-209ENST00000635828 PLCH2O75038 1416 aa13.26□□□□□ -0.29
CDKL5-209ENST00000635828 FANCAO15360 1455 aa13.26□□□□□ -0.29
CDKL5-209ENST00000635828 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
CDKL5-209ENST00000635828 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
CDKL5-209ENST00000635828 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
CDKL5-209ENST00000635828 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDKL5-209ENST00000635828 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
CDKL5-209ENST00000635828 AFAP1Q8N556 730 aa13.22□□□□□ -0.29
CDKL5-209ENST00000635828 AKNAQ7Z591 1439 aa13.21□□□□□ -0.29
CDKL5-209ENST00000635828 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
CDKL5-209ENST00000635828 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
CDKL5-209ENST00000635828 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
CDKL5-209ENST00000635828 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
CDKL5-209ENST00000635828 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
CDKL5-209ENST00000635828 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
CDKL5-209ENST00000635828 ITGAEP38570 1179 aa13.18□□□□□ -0.3
CDKL5-209ENST00000635828 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
CDKL5-209ENST00000635828 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
CDKL5-209ENST00000635828 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
CDKL5-209ENST00000635828 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
CDKL5-209ENST00000635828 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
CDKL5-209ENST00000635828 KDM6BO15054 1643 aa13.17□□□□□ -0.3
CDKL5-209ENST00000635828 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
CDKL5-209ENST00000635828 ABCC1P33527 1531 aa13.16□□□□□ -0.3
CDKL5-209ENST00000635828 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
CDKL5-209ENST00000635828 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
CDKL5-209ENST00000635828 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
CDKL5-209ENST00000635828 NEO1Q92859 1461 aa13.14□□□□□ -0.31
CDKL5-209ENST00000635828 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
CDKL5-209ENST00000635828 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
CDKL5-209ENST00000635828 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
CDKL5-209ENST00000635828 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
CDKL5-209ENST00000635828 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
CDKL5-209ENST00000635828 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
CDKL5-209ENST00000635828 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
CDKL5-209ENST00000635828 CFAP74Q9C0B2 1584 aa13.1□□□□□ -0.31
CDKL5-209ENST00000635828 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
CDKL5-209ENST00000635828 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
CDKL5-209ENST00000635828 ABCC5O15440 1437 aa13.08□□□□□ -0.31
CDKL5-209ENST00000635828 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
CDKL5-209ENST00000635828 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
CDKL5-209ENST00000635828 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
CDKL5-209ENST00000635828 DAPK1P53355 1430 aa13.06□□□□□ -0.32
CDKL5-209ENST00000635828 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
CDKL5-209ENST00000635828 KDM5CP41229 1560 aa13.05□□□□□ -0.32
CDKL5-209ENST00000635828 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
CDKL5-209ENST00000635828 ABCA6Q8N139 1617 aa13.05□□□□□ -0.32
CDKL5-209ENST00000635828 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
CDKL5-209ENST00000635828 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
CDKL5-209ENST00000635828 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
CDKL5-209ENST00000635828 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
CDKL5-209ENST00000635828 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
CDKL5-209ENST00000635828 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
CDKL5-209ENST00000635828 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.32
CDKL5-209ENST00000635828 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
CDKL5-209ENST00000635828 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.33
CDKL5-209ENST00000635828 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
CDKL5-209ENST00000635828 INO80Q9ULG1 1556 aaPredicted RBP13.01□□□□□ -0.33
CDKL5-209ENST00000635828 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
CDKL5-209ENST00000635828 DIP2CQ9Y2E4 1556 aa13.01□□□□□ -0.33
CDKL5-209ENST00000635828 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
CDKL5-209ENST00000635828 TSPY4P0CV99 314 aa13□□□□□ -0.33
CDKL5-209ENST00000635828 TSPY10P0CW01 314 aa13□□□□□ -0.33
CDKL5-209ENST00000635828 MLECQ14165 292 aa13□□□□□ -0.33
CDKL5-209ENST00000635828 ADGBQ8N7X0 1667 aa12.99□□□□□ -0.33
CDKL5-209ENST00000635828 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
CDKL5-209ENST00000635828 ARHGEF40Q8TER5 1519 aa12.97□□□□□ -0.33
CDKL5-209ENST00000635828 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
CDKL5-209ENST00000635828 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
CDKL5-209ENST00000635828 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
CDKL5-209ENST00000635828 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
CDKL5-209ENST00000635828 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
CDKL5-209ENST00000635828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDKL5-209ENST00000635828 ATP10AO60312 1499 aa12.93□□□□□ -0.34
CDKL5-209ENST00000635828 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
CDKL5-209ENST00000635828 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
CDKL5-209ENST00000635828 A2MP01023 1474 aa12.92□□□□□ -0.34
CDKL5-209ENST00000635828 GGT6Q6P531 493 aa12.92□□□□□ -0.34
CDKL5-209ENST00000635828 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
CDKL5-209ENST00000635828 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
CDKL5-209ENST00000635828 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
CDKL5-209ENST00000635828 KIF3BO15066 747 aa12.91□□□□□ -0.34
CDKL5-209ENST00000635828 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
CDKL5-209ENST00000635828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDKL5-209ENST00000635828 NAIPQ13075 1403 aa12.9□□□□□ -0.34
CDKL5-209ENST00000635828 ADGRL2O95490 1459 aa12.9□□□□□ -0.34
CDKL5-209ENST00000635828 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
CDKL5-209ENST00000635828 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.35
CDKL5-209ENST00000635828 KDM4FA0A1W2PPD8 638 aa12.89□□□□□ -0.35
CDKL5-209ENST00000635828 DHX29Q7Z478 1369 aaKnown RBP12.89□□□□□ -0.35
CDKL5-209ENST00000635828 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
CDKL5-209ENST00000635828 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
CDKL5-209ENST00000635828 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
CDKL5-209ENST00000635828 MROH1Q8NDA8 1641 aa12.85□□□□□ -0.35
CDKL5-209ENST00000635828 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
CDKL5-209ENST00000635828 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
CDKL5-209ENST00000635828 HFM1A2PYH4 1435 aa12.84□□□□□ -0.35
CDKL5-209ENST00000635828 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
CDKL5-209ENST00000635828 CFAP65Q6ZU64 1925 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms