RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
HSPG2-214ENST00000635682 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
HSPG2-214ENST00000635682 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
HSPG2-214ENST00000635682 MLECQ14165 292 aa23.73■■□□□ 1.39
HSPG2-214ENST00000635682 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
HSPG2-214ENST00000635682 RIMS1Q86UR5 1692 aaKnown RBP23.73■■□□□ 1.39
HSPG2-214ENST00000635682 CLIP1P30622 1438 aa23.72■■□□□ 1.39
HSPG2-214ENST00000635682 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
HSPG2-214ENST00000635682 SIGLEC1Q9BZZ2 1709 aa23.72■■□□□ 1.39
HSPG2-214ENST00000635682 MAGI2Q86UL8 1455 aa23.7■■□□□ 1.38
HSPG2-214ENST00000635682 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
HSPG2-214ENST00000635682 AFAP1Q8N556 730 aa23.66■■□□□ 1.38
HSPG2-214ENST00000635682 PCF11O94913 1555 aaKnown RBP23.64■■□□□ 1.37
HSPG2-214ENST00000635682 ATP10AO60312 1499 aa23.63■■□□□ 1.37
HSPG2-214ENST00000635682 CASKIN1Q8WXD9 1431 aa23.63■■□□□ 1.37
HSPG2-214ENST00000635682 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
HSPG2-214ENST00000635682 LMTK3Q96Q04 1460 aa23.62■■□□□ 1.37
HSPG2-214ENST00000635682 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
HSPG2-214ENST00000635682 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
HSPG2-214ENST00000635682 HSPA2P54652 639 aa23.59■■□□□ 1.37
HSPG2-214ENST00000635682 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
HSPG2-214ENST00000635682 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
HSPG2-214ENST00000635682 ZNF518AQ6AHZ1 1483 aa23.58■■□□□ 1.37
HSPG2-214ENST00000635682 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
HSPG2-214ENST00000635682 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
HSPG2-214ENST00000635682 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
HSPG2-214ENST00000635682 KDM5CP41229 1560 aa23.52■■□□□ 1.36
HSPG2-214ENST00000635682 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
HSPG2-214ENST00000635682 PREX2Q70Z35 1606 aa23.51■■□□□ 1.35
HSPG2-214ENST00000635682 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
HSPG2-214ENST00000635682 FYCO1Q9BQS8 1478 aa23.51■■□□□ 1.35
HSPG2-214ENST00000635682 ZNF777Q9ULD5 760 aaPredicted RBP23.5■■□□□ 1.35
HSPG2-214ENST00000635682 CDC42BPAQ5VT25 1732 aa23.48■■□□□ 1.35
HSPG2-214ENST00000635682 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
HSPG2-214ENST00000635682 ABCC1P33527 1531 aa23.47■■□□□ 1.35
HSPG2-214ENST00000635682 FBXO41Q8TF61 875 aa23.46■■□□□ 1.35
HSPG2-214ENST00000635682 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
HSPG2-214ENST00000635682 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
HSPG2-214ENST00000635682 ABCA6Q8N139 1617 aa23.45■■□□□ 1.34
HSPG2-214ENST00000635682 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
HSPG2-214ENST00000635682 GPATCH8Q9UKJ3 1502 aaKnown RBP23.4■■□□□ 1.34
HSPG2-214ENST00000635682 KIDINS220Q9ULH0 1771 aa23.39■■□□□ 1.33
HSPG2-214ENST00000635682 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
HSPG2-214ENST00000635682 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
HSPG2-214ENST00000635682 CFDP1Q9UEE9 299 aaPredicted RBP23.37■■□□□ 1.33
HSPG2-214ENST00000635682 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
HSPG2-214ENST00000635682 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
HSPG2-214ENST00000635682 SYCP2Q9BX26 1530 aa23.35■■□□□ 1.33
HSPG2-214ENST00000635682 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
HSPG2-214ENST00000635682 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
HSPG2-214ENST00000635682 SPAG9O60271 1321 aaKnown RBP23.34■■□□□ 1.33
HSPG2-214ENST00000635682 AGLP35573 1532 aa23.34■■□□□ 1.33
HSPG2-214ENST00000635682 SETD1BQ9UPS6 1966 aaKnown RBP23.34■■□□□ 1.33
HSPG2-214ENST00000635682 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
HSPG2-214ENST00000635682 C3P01024 1663 aa23.3■■□□□ 1.32
HSPG2-214ENST00000635682 UHRF1BP1Q6BDS2 1440 aa23.29■■□□□ 1.32
HSPG2-214ENST00000635682 APLP2Q06481 763 aa23.28■■□□□ 1.32
HSPG2-214ENST00000635682 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
HSPG2-214ENST00000635682 KIAA1107Q9UPP5 1409 aa23.26■■□□□ 1.31
HSPG2-214ENST00000635682 SUPT6HQ7KZ85 1726 aaKnown RBP23.26■■□□□ 1.31
HSPG2-214ENST00000635682 CERKQ8TCT0 537 aa23.26■■□□□ 1.31
HSPG2-214ENST00000635682 PLEKHH2Q8IVE3 1493 aa23.25■■□□□ 1.31
HSPG2-214ENST00000635682 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
HSPG2-214ENST00000635682 ATP7AQ04656 1500 aa23.23■■□□□ 1.31
HSPG2-214ENST00000635682 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
HSPG2-214ENST00000635682 TIAM1Q13009 1591 aa23.22■■□□□ 1.31
HSPG2-214ENST00000635682 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
HSPG2-214ENST00000635682 EHBP1L1Q8N3D4 1523 aa23.2■■□□□ 1.3
HSPG2-214ENST00000635682 INO80Q9ULG1 1556 aaPredicted RBP23.19■■□□□ 1.3
HSPG2-214ENST00000635682 A2MP01023 1474 aa23.19■■□□□ 1.3
HSPG2-214ENST00000635682 GGT6Q6P531 493 aa23.19■■□□□ 1.3
HSPG2-214ENST00000635682 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
HSPG2-214ENST00000635682 MBD5Q9P267 1494 aa23.15■■□□□ 1.3
HSPG2-214ENST00000635682 PLXNC1O60486 1568 aa23.14■■□□□ 1.3
HSPG2-214ENST00000635682 CLTCQ00610 1675 aaKnown RBP23.14■■□□□ 1.29
HSPG2-214ENST00000635682 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
HSPG2-214ENST00000635682 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
HSPG2-214ENST00000635682 ADGBQ8N7X0 1667 aa23.1■■□□□ 1.29
HSPG2-214ENST00000635682 NPATQ14207 1427 aa23.1■■□□□ 1.29
HSPG2-214ENST00000635682 PTPRTO14522 1441 aa23.08■■□□□ 1.29
HSPG2-214ENST00000635682 RTEL1-TNFRSF6BF6WH68 1400 aa23.07■■□□□ 1.28
HSPG2-214ENST00000635682 NCOA1Q15788 1441 aa23.07■■□□□ 1.28
HSPG2-214ENST00000635682 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
HSPG2-214ENST00000635682 CAMSAP2Q08AD1 1489 aa23.05■■□□□ 1.28
HSPG2-214ENST00000635682 CAMSAP1Q5T5Y3 1602 aa23.05■■□□□ 1.28
HSPG2-214ENST00000635682 DHX29Q7Z478 1369 aaKnown RBP23.05■■□□□ 1.28
HSPG2-214ENST00000635682 PTPRKQ15262 1439 aa23.05■■□□□ 1.28
HSPG2-214ENST00000635682 NCKAP5LQ9HCH0 1330 aa23.05■■□□□ 1.28
HSPG2-214ENST00000635682 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
HSPG2-214ENST00000635682 KIF3BO15066 747 aa23.03■■□□□ 1.28
HSPG2-214ENST00000635682 CCDC141Q6ZP82 1450 aa23.03■■□□□ 1.28
HSPG2-214ENST00000635682 LRRC9Q6ZRR7 1453 aa23.03■■□□□ 1.28
HSPG2-214ENST00000635682 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
HSPG2-214ENST00000635682 MYO3AQ8NEV4 1616 aa22.99■■□□□ 1.27
HSPG2-214ENST00000635682 KANK4Q5T7N3 995 aaPredicted RBP22.98■■□□□ 1.27
HSPG2-214ENST00000635682 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
HSPG2-214ENST00000635682 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
HSPG2-214ENST00000635682 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
HSPG2-214ENST00000635682 LTBP4Q8N2S1 1624 aa22.96■■□□□ 1.27
HSPG2-214ENST00000635682 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms