RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
CD55-211ENST00000635614 ABCA9Q8IUA7 1624 aa16.85■□□□□ 0.29
CD55-211ENST00000635614 ATP1B4Q9UN42 357 aaPredicted RBP16.83■□□□□ 0.28
CD55-211ENST00000635614 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
CD55-211ENST00000635614 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
CD55-211ENST00000635614 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
CD55-211ENST00000635614 NEO1Q92859 1461 aa16.8■□□□□ 0.28
CD55-211ENST00000635614 COL17A1Q9UMD9 1497 aaPredicted RBP16.78■□□□□ 0.28
CD55-211ENST00000635614 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
CD55-211ENST00000635614 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
CD55-211ENST00000635614 CLIP1P30622 1438 aa16.74■□□□□ 0.27
CD55-211ENST00000635614 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
CD55-211ENST00000635614 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
CD55-211ENST00000635614 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
CD55-211ENST00000635614 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
CD55-211ENST00000635614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
CD55-211ENST00000635614 FANCAO15360 1455 aa16.69■□□□□ 0.26
CD55-211ENST00000635614 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
CD55-211ENST00000635614 TROQ12816 1431 aaPredicted RBP16.68■□□□□ 0.26
CD55-211ENST00000635614 AKNAQ7Z591 1439 aa16.68■□□□□ 0.26
CD55-211ENST00000635614 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
CD55-211ENST00000635614 PLCH2O75038 1416 aa16.67■□□□□ 0.26
CD55-211ENST00000635614 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
CD55-211ENST00000635614 KIF14Q15058 1648 aa16.66■□□□□ 0.26
CD55-211ENST00000635614 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
CD55-211ENST00000635614 RAPGEF3O95398 923 aa16.65■□□□□ 0.26
CD55-211ENST00000635614 CAPN15O75808 1086 aa16.64■□□□□ 0.25
CD55-211ENST00000635614 ADGRL1O94910 1474 aa16.64■□□□□ 0.25
CD55-211ENST00000635614 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CD55-211ENST00000635614 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
CD55-211ENST00000635614 MYO5CQ9NQX4 1742 aa16.62■□□□□ 0.25
CD55-211ENST00000635614 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
CD55-211ENST00000635614 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
CD55-211ENST00000635614 POLA2Q14181 598 aa16.6■□□□□ 0.25
CD55-211ENST00000635614 MAGI2Q86UL8 1455 aa16.6■□□□□ 0.25
CD55-211ENST00000635614 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
CD55-211ENST00000635614 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
CD55-211ENST00000635614 ARHGAP5Q13017 1502 aa16.56■□□□□ 0.24
CD55-211ENST00000635614 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
CD55-211ENST00000635614 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
CD55-211ENST00000635614 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
CD55-211ENST00000635614 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
CD55-211ENST00000635614 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
CD55-211ENST00000635614 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
CD55-211ENST00000635614 FRMPD1Q5SYB0 1578 aa16.53■□□□□ 0.24
CD55-211ENST00000635614 ZNF518AQ6AHZ1 1483 aa16.52■□□□□ 0.23
CD55-211ENST00000635614 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
CD55-211ENST00000635614 ARHGEF40Q8TER5 1519 aa16.51■□□□□ 0.23
CD55-211ENST00000635614 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
CD55-211ENST00000635614 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
CD55-211ENST00000635614 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
CD55-211ENST00000635614 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
CD55-211ENST00000635614 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
CD55-211ENST00000635614 CCNB3Q8WWL7 1395 aa16.46■□□□□ 0.23
CD55-211ENST00000635614 ATP10AO60312 1499 aa16.46■□□□□ 0.23
CD55-211ENST00000635614 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
CD55-211ENST00000635614 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
CD55-211ENST00000635614 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
CD55-211ENST00000635614 ADAMTSL3P82987 1691 aa16.44■□□□□ 0.22
CD55-211ENST00000635614 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
CD55-211ENST00000635614 CDC42BPAQ5VT25 1732 aa16.43■□□□□ 0.22
CD55-211ENST00000635614 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
CD55-211ENST00000635614 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
CD55-211ENST00000635614 EHBP1L1Q8N3D4 1523 aa16.43■□□□□ 0.22
CD55-211ENST00000635614 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
CD55-211ENST00000635614 KDM5CP41229 1560 aa16.42■□□□□ 0.22
CD55-211ENST00000635614 MLH3Q9UHC1 1453 aa16.42■□□□□ 0.22
CD55-211ENST00000635614 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
CD55-211ENST00000635614 YEATS2Q9ULM3 1422 aa16.41■□□□□ 0.22
CD55-211ENST00000635614 ABCC1P33527 1531 aa16.4■□□□□ 0.22
CD55-211ENST00000635614 HECW2Q9P2P5 1572 aa16.4■□□□□ 0.22
CD55-211ENST00000635614 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
CD55-211ENST00000635614 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
CD55-211ENST00000635614 PTPRMP28827 1452 aa16.4■□□□□ 0.22
CD55-211ENST00000635614 PROM2Q8N271 834 aa16.39■□□□□ 0.21
CD55-211ENST00000635614 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
CD55-211ENST00000635614 ABCB7O75027 752 aa16.38■□□□□ 0.21
CD55-211ENST00000635614 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
CD55-211ENST00000635614 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
CD55-211ENST00000635614 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
CD55-211ENST00000635614 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CD55-211ENST00000635614 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
CD55-211ENST00000635614 MADDQ8WXG6 1647 aa16.35■□□□□ 0.21
CD55-211ENST00000635614 MLECQ14165 292 aa16.35■□□□□ 0.21
CD55-211ENST00000635614 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
CD55-211ENST00000635614 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
CD55-211ENST00000635614 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
CD55-211ENST00000635614 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
CD55-211ENST00000635614 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■■□ 22.2
CD55-211ENST00000635614 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
CD55-211ENST00000635614 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
CD55-211ENST00000635614 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
CD55-211ENST00000635614 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
CD55-211ENST00000635614 RIMS1Q86UR5 1692 aaKnown RBP16.31■□□□□ 0.2
CD55-211ENST00000635614 AGLP35573 1532 aa16.31■□□□□ 0.2
CD55-211ENST00000635614 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
CD55-211ENST00000635614 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
CD55-211ENST00000635614 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
CD55-211ENST00000635614 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
CD55-211ENST00000635614 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms