RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.99	□□□□□ -0.17
SMARCA2-238	ENST00000635273	KCNV2	Q8TDN2	545 aa		13.97	□□□□□ -0.17
SMARCA2-238	ENST00000635273	TMEM106C	Q9BVX2	250 aa		13.96	□□□□□ -0.17
SMARCA2-238	ENST00000635273	EFCAB3	Q8N7B9	438 aa		13.95	□□□□□ -0.18
SMARCA2-238	ENST00000635273	PPP1R37	O75864	691 aa		13.94	□□□□□ -0.18
SMARCA2-238	ENST00000635273	FBXO22	Q8NEZ5	403 aa		13.94	□□□□□ -0.18
SMARCA2-238	ENST00000635273	EMP3	P54852	163 aa		13.93	□□□□□ -0.18
SMARCA2-238	ENST00000635273	NLRP6	P59044	892 aa		13.93	□□□□□ -0.18
SMARCA2-238	ENST00000635273	CABP2	Q9NPB3	220 aa		13.93	□□□□□ -0.18
SMARCA2-238	ENST00000635273	SOX12	O15370	315 aa		13.92	□□□□□ -0.18
SMARCA2-238	ENST00000635273	IRX5	P78411	483 aa	Predicted RBP	13.92	□□□□□ -0.18
SMARCA2-238	ENST00000635273	OCEL1	Q9H607	264 aa		13.9	□□□□□ -0.18
SMARCA2-238	ENST00000635273	PHF8	Q9UPP1	1060 aa		13.9	□□□□□ -0.18
SMARCA2-238	ENST00000635273	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SMARCA2-238	ENST00000635273	KRTAP3-3	Q9BYR6	98 aa		13.82	□□□□□ -0.2
SMARCA2-238	ENST00000635273	KRTAP3-2	Q9BYR7	98 aa		13.82	□□□□□ -0.2
SMARCA2-238	ENST00000635273	HS3ST6	Q96QI5	342 aa		13.81	□□□□□ -0.2
SMARCA2-238	ENST00000635273	LMOD2	Q6P5Q4	547 aa		13.8	□□□□□ -0.2
SMARCA2-238	ENST00000635273	ARHGEF1	Q92888	912 aa	Known RBP	13.8	□□□□□ -0.2
SMARCA2-238	ENST00000635273	E2F4	Q16254	413 aa		13.78	□□□□□ -0.2
SMARCA2-238	ENST00000635273	C3orf67	Q6ZVT6	689 aa		13.78	□□□□□ -0.2
SMARCA2-238	ENST00000635273	FAM205C	A6NFA0	338 aa		13.77	□□□□□ -0.21
SMARCA2-238	ENST00000635273	MS4A4A	Q96JQ5	239 aa		13.75	□□□□□ -0.21
SMARCA2-238	ENST00000635273	NCKAP5L	Q9HCH0	1330 aa		13.73	□□□□□ -0.21
SMARCA2-238	ENST00000635273	TULP1	O00294	542 aa	Predicted RBP	13.71	□□□□□ -0.21
SMARCA2-238	ENST00000635273	LARP6	Q9BRS8	491 aa	Known RBP	13.7	□□□□□ -0.22
SMARCA2-238	ENST00000635273	PDE4A	P27815	886 aa		13.69	□□□□□ -0.22
SMARCA2-238	ENST00000635273	GOLGA2	Q08379	1002 aa		13.69	□□□□□ -0.22
SMARCA2-238	ENST00000635273	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.67	□□□□□ -0.22
SMARCA2-238	ENST00000635273	SEMA3E	O15041	775 aa		13.66	□□□□□ -0.22
SMARCA2-238	ENST00000635273	MFSD10	Q14728	455 aa		13.66	□□□□□ -0.22
SMARCA2-238	ENST00000635273	POTEB3	A0JP26	581 aa		13.65	□□□□□ -0.22
SMARCA2-238	ENST00000635273	TESPA1	A2RU30	521 aa	Predicted RBP	13.65	□□□□□ -0.22
SMARCA2-238	ENST00000635273	POTEB	Q6S5H4	581 aa		13.65	□□□□□ -0.22
SMARCA2-238	ENST00000635273	RNF166	Q96A37	237 aa	Predicted RBP	13.65	□□□□□ -0.22
SMARCA2-238	ENST00000635273	CRISPLD2	Q9H0B8	497 aa		13.65	□□□□□ -0.22
SMARCA2-238	ENST00000635273	MKRN3	Q13064	507 aa	Known RBP	13.62	□□□□□ -0.23
SMARCA2-238	ENST00000635273	DDX27	Q96GQ7	796 aa	Known RBP	13.61	□□□□□ -0.23
SMARCA2-238	ENST00000635273	TMEM132A	Q24JP5	1023 aa		13.6	□□□□□ -0.23
SMARCA2-238	ENST00000635273	ZC3H15	Q8WU90	426 aa	Known RBP	13.6	□□□□□ -0.23
SMARCA2-238	ENST00000635273	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.58	□□□□□ -0.24
SMARCA2-238	ENST00000635273	GTF3C3	Q9Y5Q9	886 aa		13.58	□□□□□ -0.24
SMARCA2-238	ENST00000635273	CAMK2B	Q13554	666 aa		13.56	□□□□□ -0.24
SMARCA2-238	ENST00000635273	ILDR1	Q86SU0	546 aa	Predicted RBP	13.54	□□□□□ -0.24
SMARCA2-238	ENST00000635273	PDCD7	Q8N8D1	485 aa	Known RBP	13.54	□□□□□ -0.24
SMARCA2-238	ENST00000635273	SMYD5	Q6GMV2	418 aa		13.52	□□□□□ -0.25
SMARCA2-238	ENST00000635273	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SMARCA2-238	ENST00000635273	MYT1L	Q9UL68	1186 aa		13.5	□□□□□ -0.25
SMARCA2-238	ENST00000635273	BRPF1	P55201	1214 aa	Predicted RBP	13.49	□□□□□ -0.25
SMARCA2-238	ENST00000635273	TIMELESS	Q9UNS1	1208 aa		13.49	□□□□□ -0.25
SMARCA2-238	ENST00000635273	GPHN	Q9NQX3	736 aa	Predicted RBP	13.47	□□□□□ -0.25
SMARCA2-238	ENST00000635273	ERBB3	P21860	1342 aa		13.46	□□□□□ -0.25
SMARCA2-238	ENST00000635273	ZNF710	Q8N1W2	664 aa		13.46	□□□□□ -0.25
SMARCA2-238	ENST00000635273	SLC24A3	Q9HC58	644 aa		13.46	□□□□□ -0.25
SMARCA2-238	ENST00000635273	PPP1R15B	Q5SWA1	713 aa		13.45	□□□□□ -0.26
SMARCA2-238	ENST00000635273	ZMYND10	O75800	440 aa		13.44	□□□□□ -0.26
SMARCA2-238	ENST00000635273		G3V3G9	751 aa		13.42	□□□□□ -0.26
SMARCA2-238	ENST00000635273	HOXB1	P14653	301 aa	Predicted RBP	13.42	□□□□□ -0.26
SMARCA2-238	ENST00000635273	PTGER2	P43116	358 aa		13.42	□□□□□ -0.26
SMARCA2-238	ENST00000635273	DPY19L2	Q6NUT2	758 aa		13.41	□□□□□ -0.26
SMARCA2-238	ENST00000635273	DOK7	Q18PE1	504 aa		13.39	□□□□□ -0.27
SMARCA2-238	ENST00000635273	MLLT3	P42568	568 aa	Predicted RBP	13.38	□□□□□ -0.27
SMARCA2-238	ENST00000635273	NEUROD2	Q15784	382 aa		13.38	□□□□□ -0.27
SMARCA2-238	ENST00000635273	RIMBP2	O15034	1052 aa		13.36	□□□□□ -0.27
SMARCA2-238	ENST00000635273	DSG2	Q14126	1118 aa		13.36	□□□□□ -0.27
SMARCA2-238	ENST00000635273	BARGIN	Q6ZT62	677 aa		13.36	□□□□□ -0.27
SMARCA2-238	ENST00000635273	MICALL2	Q8IY33	904 aa		13.36	□□□□□ -0.27
SMARCA2-238	ENST00000635273	EMILIN3	Q9NT22	766 aa		13.36	□□□□□ -0.27
SMARCA2-238	ENST00000635273	HOXB3	P14651	431 aa	Predicted RBP	13.35	□□□□□ -0.27
SMARCA2-238	ENST00000635273	RBM26	Q5T8P6	1007 aa	Known RBP	13.35	□□□□□ -0.27
SMARCA2-238	ENST00000635273	ERICH6	Q7L0X2	663 aa		13.35	□□□□□ -0.27
SMARCA2-238	ENST00000635273	DPYSL4	O14531	572 aa		13.34	□□□□□ -0.27
SMARCA2-238	ENST00000635273	TMC2	Q8TDI7	906 aa		13.32	□□□□□ -0.28
SMARCA2-238	ENST00000635273	FOXK1	P85037	733 aa		13.31	□□□□□ -0.28
SMARCA2-238	ENST00000635273	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.3	□□□□□ -0.28
SMARCA2-238	ENST00000635273	VARS2	Q5ST30	1063 aa	Known RBP	13.3	□□□□□ -0.28
SMARCA2-238	ENST00000635273	GPIHBP1	Q8IV16	184 aa		13.3	□□□□□ -0.28
SMARCA2-238	ENST00000635273	PDIA6	Q15084	440 aa		13.29	□□□□□ -0.28
SMARCA2-238	ENST00000635273	BOLA1	Q9Y3E2	137 aa		13.26	□□□□□ -0.29
SMARCA2-238	ENST00000635273	PLPP6	Q8IY26	295 aa		13.25	□□□□□ -0.29
SMARCA2-238	ENST00000635273	ZNF687	Q8N1G0	1237 aa		13.24	□□□□□ -0.29
SMARCA2-238	ENST00000635273	AK7	Q96M32	723 aa		13.24	□□□□□ -0.29
SMARCA2-238	ENST00000635273	C2orf72	A6NCS6	295 aa		13.22	□□□□□ -0.29
SMARCA2-238	ENST00000635273	KIF3C	O14782	793 aa		13.22	□□□□□ -0.29
SMARCA2-238	ENST00000635273	KRI1	Q8N9T8	703 aa	Known RBP	13.22	□□□□□ -0.29
SMARCA2-238	ENST00000635273	C14orf37	Q86TY3	774 aa		13.19	□□□□□ -0.3
SMARCA2-238	ENST00000635273	ZSWIM6	Q9HCJ5	1215 aa		13.18	□□□□□ -0.3
SMARCA2-238	ENST00000635273	MAP3K9	P80192	1104 aa		13.15	□□□□□ -0.3
SMARCA2-238	ENST00000635273	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.14	□□□□□ -0.31
SMARCA2-238	ENST00000635273	GPR37	O15354	613 aa		13.13	□□□□□ -0.31
SMARCA2-238	ENST00000635273	TRIM66	O15016	1216 aa		13.12	□□□□□ -0.31
SMARCA2-238	ENST00000635273	GRXCR2	A6NFK2	248 aa		13.11	□□□□□ -0.31
SMARCA2-238	ENST00000635273	PLA2G2E	Q9NZK7	142 aa		13.11	□□□□□ -0.31
SMARCA2-238	ENST00000635273	TMEM92	Q6UXU6	159 aa		13.1	□□□□□ -0.31
SMARCA2-238	ENST00000635273	ANKRD13D	Q6ZTN6	518 aa		13.1	□□□□□ -0.31
SMARCA2-238	ENST00000635273	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
SMARCA2-238	ENST00000635273	KDM4C	Q9H3R0	1056 aa		13.08	□□□□□ -0.32
SMARCA2-238	ENST00000635273	PDE4D	Q08499	809 aa		13.07	□□□□□ -0.32
SMARCA2-238	ENST00000635273	OXER1	Q8TDS5	423 aa		13.07	□□□□□ -0.32
SMARCA2-238	ENST00000635273	NUTM2F	A1L443	756 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms