RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 LHX8Q68G74 356 aa9.09□□□□□ -0.95
LINC00550-202ENST00000629570 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
LINC00550-202ENST00000629570 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
LINC00550-202ENST00000629570 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
LINC00550-202ENST00000629570 FHOD3Q2V2M9 1422 aa9.07□□□□□ -0.96
LINC00550-202ENST00000629570 CLCN6P51797 869 aa9.07□□□□□ -0.96
LINC00550-202ENST00000629570 PLB1Q6P1J6 1458 aa9.07□□□□□ -0.96
LINC00550-202ENST00000629570 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
LINC00550-202ENST00000629570 EFCAB5A4FU69 1503 aa9.06□□□□□ -0.96
LINC00550-202ENST00000629570 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
LINC00550-202ENST00000629570 UHRF1BP1LA0JNW5 1464 aa9.05□□□□□ -0.96
LINC00550-202ENST00000629570 ABCA8O94911 1581 aa9.04□□□□□ -0.96
LINC00550-202ENST00000629570 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
LINC00550-202ENST00000629570 MAPKBP1O60336 1514 aa9.01□□□□□ -0.97
LINC00550-202ENST00000629570 KDM5BQ9UGL1 1544 aa9.01□□□□□ -0.97
LINC00550-202ENST00000629570 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
LINC00550-202ENST00000629570 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
LINC00550-202ENST00000629570 CLIP1P30622 1438 aa9□□□□□ -0.97
LINC00550-202ENST00000629570 ARID3CA6NKF2 412 aa9□□□□□ -0.97
LINC00550-202ENST00000629570 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00550-202ENST00000629570 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
LINC00550-202ENST00000629570 ZCCHC11Q5TAX3 1644 aaKnown RBP9□□□□□ -0.97
LINC00550-202ENST00000629570 RAPGEF6Q8TEU7 1601 aa9□□□□□ -0.97
LINC00550-202ENST00000629570 NUP153P49790 1475 aaKnown RBP8.99□□□□□ -0.97
LINC00550-202ENST00000629570 CEP162Q5TB80 1403 aa8.98□□□□□ -0.97
LINC00550-202ENST00000629570 ASXL2Q76L83 1435 aa8.98□□□□□ -0.97
LINC00550-202ENST00000629570 GALR2O43603 387 aaPredicted RBP8.98□□□□□ -0.97
LINC00550-202ENST00000629570 PROM2Q8N271 834 aa8.98□□□□□ -0.97
LINC00550-202ENST00000629570 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
LINC00550-202ENST00000629570 PAK3O75914 559 aaPredicted RBP8.97□□□□□ -0.97
LINC00550-202ENST00000629570 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
LINC00550-202ENST00000629570 ATP10BO94823 1461 aa8.96□□□□□ -0.97
LINC00550-202ENST00000629570 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.97
LINC00550-202ENST00000629570 DIP2BQ9P265 1576 aa8.96□□□□□ -0.97
LINC00550-202ENST00000629570 KIF13AQ9H1H9 1805 aa8.95□□□□□ -0.98
LINC00550-202ENST00000629570 WDR7Q9Y4E6 1490 aa8.95□□□□□ -0.98
LINC00550-202ENST00000629570 PCF11O94913 1555 aaKnown RBP8.95□□□□□ -0.98
LINC00550-202ENST00000629570 FAM69CQ0P6D2 419 aa8.94□□□□□ -0.98
LINC00550-202ENST00000629570 CDK13Q14004 1512 aaKnown RBP8.94□□□□□ -0.98
LINC00550-202ENST00000629570 HECW1Q76N89 1606 aa8.94□□□□□ -0.98
LINC00550-202ENST00000629570 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
LINC00550-202ENST00000629570 CASKIN1Q8WXD9 1431 aa8.91□□□□□ -0.98
LINC00550-202ENST00000629570 ATP1B4Q9UN42 357 aaPredicted RBP8.91□□□□□ -0.98
LINC00550-202ENST00000629570 GLI2P10070 1586 aa8.9□□□□□ -0.98
LINC00550-202ENST00000629570 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
LINC00550-202ENST00000629570 LRRIQ1Q96JM4 1722 aa8.9□□□□□ -0.98
LINC00550-202ENST00000629570 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
LINC00550-202ENST00000629570 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
LINC00550-202ENST00000629570 CCDC18Q5T9S5 1454 aa8.87□□□□□ -0.99
LINC00550-202ENST00000629570 PPRC1Q5VV67 1664 aaKnown RBP8.87□□□□□ -0.99
LINC00550-202ENST00000629570 TSPOAP1O95153 1857 aa8.86□□□□□ -0.99
LINC00550-202ENST00000629570 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
LINC00550-202ENST00000629570 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
LINC00550-202ENST00000629570 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
LINC00550-202ENST00000629570 ABCA9Q8IUA7 1624 aa8.85□□□□□ -0.99
LINC00550-202ENST00000629570 KIF14Q15058 1648 aa8.84□□□□□ -0.99
LINC00550-202ENST00000629570 TROQ12816 1431 aaPredicted RBP8.84□□□□□ -0.99
LINC00550-202ENST00000629570 TTC37Q6PGP7 1564 aa8.84□□□□□ -0.99
LINC00550-202ENST00000629570 CD109Q6YHK3 1445 aa8.84□□□□□ -0.99
LINC00550-202ENST00000629570 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
LINC00550-202ENST00000629570 CFAP43Q8NDM7 1665 aa8.84□□□□□ -0.99
LINC00550-202ENST00000629570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.84□□□□□ -0.99
LINC00550-202ENST00000629570 TSPYL2Q9H2G4 693 aaPredicted RBP8.83□□□□□ -1
LINC00550-202ENST00000629570 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
LINC00550-202ENST00000629570 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
LINC00550-202ENST00000629570 TEX14Q8IWB6 1497 aa8.82□□□□□ -1
LINC00550-202ENST00000629570 COL17A1Q9UMD9 1497 aaPredicted RBP8.8□□□□□ -1
LINC00550-202ENST00000629570 KDM6BO15054 1643 aa8.8□□□□□ -1
LINC00550-202ENST00000629570 TIAM1Q13009 1591 aa8.79□□□□□ -1
LINC00550-202ENST00000629570 MTUS2Q5JR59 1369 aa8.79□□□□□ -1
LINC00550-202ENST00000629570 POTEB2H3BUK9 544 aa8.79□□□□□ -1
LINC00550-202ENST00000629570 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
LINC00550-202ENST00000629570 MIER1Q8N108 512 aa8.78□□□□□ -1
LINC00550-202ENST00000629570 EHBP1L1Q8N3D4 1523 aa8.78□□□□□ -1
LINC00550-202ENST00000629570 FANCAO15360 1455 aa8.77□□□□□ -1
LINC00550-202ENST00000629570 ASTLQ6HA08 431 aaPredicted RBP8.77□□□□□ -1.01
LINC00550-202ENST00000629570 OTUD5Q96G74 571 aa8.77□□□□□ -1.01
LINC00550-202ENST00000629570 PLCH2O75038 1416 aa8.77□□□□□ -1.01
LINC00550-202ENST00000629570 NEO1Q92859 1461 aa8.77□□□□□ -1.01
LINC00550-202ENST00000629570 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
LINC00550-202ENST00000629570 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
LINC00550-202ENST00000629570 MYO5CQ9NQX4 1742 aa8.76□□□□□ -1.01
LINC00550-202ENST00000629570 LRRC9Q6ZRR7 1453 aa8.76□□□□□ -1.01
LINC00550-202ENST00000629570 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
LINC00550-202ENST00000629570 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
LINC00550-202ENST00000629570 PREX2Q70Z35 1606 aa8.75□□□□□ -1.01
LINC00550-202ENST00000629570 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
LINC00550-202ENST00000629570 ARAP3Q8WWN8 1544 aa8.75□□□□□ -1.01
LINC00550-202ENST00000629570 CFAP74Q9C0B2 1584 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 AKNAQ7Z591 1439 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 RASEFQ8IZ41 740 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 KIF12Q96FN5 646 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 GPATCH8Q9UKJ3 1502 aaKnown RBP8.74□□□□□ -1.01
LINC00550-202ENST00000629570 CDC42BPAQ5VT25 1732 aa8.74□□□□□ -1.01
LINC00550-202ENST00000629570 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
LINC00550-202ENST00000629570 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
LINC00550-202ENST00000629570 FRMPD1Q5SYB0 1578 aa8.73□□□□□ -1.01
LINC00550-202ENST00000629570 PHLDB1Q86UU1 1377 aa8.73□□□□□ -1.01
LINC00550-202ENST00000629570 ADGRL1O94910 1474 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms