RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 ERICH6Q7L0X2 663 aa25.72■■□□□ 1.71
MECP2-218ENST00000629277 KIF7Q2M1P5 1343 aa25.71■■□□□ 1.71
MECP2-218ENST00000629277 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
MECP2-218ENST00000629277 EPRSP07814 1512 aaKnown RBP25.7■■□□□ 1.71
MECP2-218ENST00000629277 ZBED9Q6R2W3 1325 aa25.7■■□□□ 1.7
MECP2-218ENST00000629277 SENP3-EIF4A1A0A087X0R7 540 aa25.69■■□□□ 1.7
MECP2-218ENST00000629277 ERICH6BQ5W0A0 696 aa25.69■■□□□ 1.7
MECP2-218ENST00000629277 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
MECP2-218ENST00000629277 ZNF644Q9H582 1327 aaPredicted RBP25.69■■□□□ 1.7
MECP2-218ENST00000629277 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
MECP2-218ENST00000629277 AKNAQ7Z591 1439 aa25.67■■□□□ 1.7
MECP2-218ENST00000629277 SLC4A1APQ9BWU0 796 aaKnown RBP25.64■■□□□ 1.69
MECP2-218ENST00000629277 RPRD2Q5VT52 1461 aaKnown RBP25.62■■□□□ 1.69
MECP2-218ENST00000629277 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
MECP2-218ENST00000629277 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
MECP2-218ENST00000629277 TEX14Q8IWB6 1497 aa25.62■■□□□ 1.69
MECP2-218ENST00000629277 SPATA31E1Q6ZUB1 1445 aa25.61■■□□□ 1.69
MECP2-218ENST00000629277 DAPK1P53355 1430 aa25.58■■□□□ 1.69
MECP2-218ENST00000629277 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
MECP2-218ENST00000629277 ABCC5O15440 1437 aa25.56■■□□□ 1.68
MECP2-218ENST00000629277 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
MECP2-218ENST00000629277 IQGAP2Q13576 1575 aa25.53■■□□□ 1.68
MECP2-218ENST00000629277 WDR62O43379 1518 aa25.52■■□□□ 1.68
MECP2-218ENST00000629277 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
MECP2-218ENST00000629277 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
MECP2-218ENST00000629277 ROCK1Q13464 1354 aa25.5■■□□□ 1.67
MECP2-218ENST00000629277 DHX29Q7Z478 1369 aaKnown RBP25.49■■□□□ 1.67
MECP2-218ENST00000629277 PAK3O75914 559 aaPredicted RBP25.44■■□□□ 1.66
MECP2-218ENST00000629277 SMG6Q86US8 1419 aaKnown RBP25.43■■□□□ 1.66
MECP2-218ENST00000629277 USP47Q96K76 1375 aa25.42■■□□□ 1.66
MECP2-218ENST00000629277 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
MECP2-218ENST00000629277 DNMT1P26358 1616 aaKnown RBP25.42■■□□□ 1.66
MECP2-218ENST00000629277 PZPP20742 1482 aa25.42■■□□□ 1.66
MECP2-218ENST00000629277 ZNF777Q9ULD5 760 aaPredicted RBP25.4■■□□□ 1.66
MECP2-218ENST00000629277 NBR1Q14596 966 aa25.39■■□□□ 1.66
MECP2-218ENST00000629277 CCDC136Q96JN2 1154 aa25.39■■□□□ 1.66
MECP2-218ENST00000629277 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
MECP2-218ENST00000629277 NOP58Q9Y2X3 529 aaKnown RBP25.38■■□□□ 1.65
MECP2-218ENST00000629277 BCORL1Q5H9F3 1711 aa25.38■■□□□ 1.65
MECP2-218ENST00000629277 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
MECP2-218ENST00000629277 NUP153P49790 1475 aaKnown RBP25.37■■□□□ 1.65
MECP2-218ENST00000629277 PKD2Q13563 968 aa25.37■■□□□ 1.65
MECP2-218ENST00000629277 DEKP35659 375 aaKnown RBP25.35■■□□□ 1.65
MECP2-218ENST00000629277 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
MECP2-218ENST00000629277 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
MECP2-218ENST00000629277 PNISRQ8TF01 805 aaKnown RBP25.34■■□□□ 1.65
MECP2-218ENST00000629277 RNF123Q5XPI4 1314 aa25.33■■□□□ 1.65
MECP2-218ENST00000629277 POLR1AO95602 1720 aaPredicted RBP25.33■■□□□ 1.65
MECP2-218ENST00000629277 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.65
MECP2-218ENST00000629277 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
MECP2-218ENST00000629277 DISP1Q96F81 1524 aa25.31■■□□□ 1.64
MECP2-218ENST00000629277 TMC1Q8TDI8 760 aa25.31■■□□□ 1.64
MECP2-218ENST00000629277 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
MECP2-218ENST00000629277 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
MECP2-218ENST00000629277 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
MECP2-218ENST00000629277 KDM2AQ9Y2K7 1162 aa25.26■■□□□ 1.63
MECP2-218ENST00000629277 CARD11Q9BXL7 1154 aa25.25■■□□□ 1.63
MECP2-218ENST00000629277 KIAA0556O60303 1618 aa25.25■■□□□ 1.63
MECP2-218ENST00000629277 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
MECP2-218ENST00000629277 KDM5CP41229 1560 aa25.23■■□□□ 1.63
MECP2-218ENST00000629277 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
MECP2-218ENST00000629277 RAPGEF6Q8TEU7 1601 aa25.21■■□□□ 1.63
MECP2-218ENST00000629277 GPATCH8Q9UKJ3 1502 aaKnown RBP25.2■■□□□ 1.63
MECP2-218ENST00000629277 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
MECP2-218ENST00000629277 ANP32AP39687 249 aaKnown RBP25.19■■□□□ 1.62
MECP2-218ENST00000629277 IPO9Q96P70 1041 aaKnown RBP25.19■■□□□ 1.62
MECP2-218ENST00000629277 TROQ12816 1431 aaPredicted RBP25.19■■□□□ 1.62
MECP2-218ENST00000629277 PLB1Q6P1J6 1458 aa25.18■■□□□ 1.62
MECP2-218ENST00000629277 KIF14Q15058 1648 aa25.18■■□□□ 1.62
MECP2-218ENST00000629277 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
MECP2-218ENST00000629277 NUP155O75694 1391 aa25.17■■□□□ 1.62
MECP2-218ENST00000629277 ANKRD50Q9ULJ7 1429 aa25.16■■□□□ 1.62
MECP2-218ENST00000629277 ARID4BQ4LE39 1312 aaPredicted RBP25.16■■□□□ 1.62
MECP2-218ENST00000629277 EXOC6Q8TAG9 804 aa25.15■■□□□ 1.62
MECP2-218ENST00000629277 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
MECP2-218ENST00000629277 DCAF11Q8TEB1 546 aa25.14■■□□□ 1.61
MECP2-218ENST00000629277 KIF15Q9NS87 1388 aa25.14■■□□□ 1.61
MECP2-218ENST00000629277 LRPPRCP42704 1394 aaKnown RBP25.12■■□□□ 1.61
MECP2-218ENST00000629277 RALGAPBQ86X10 1494 aa25.12■■□□□ 1.61
MECP2-218ENST00000629277 ROCK2O75116 1388 aaKnown RBP25.11■■□□□ 1.61
MECP2-218ENST00000629277 ZBTB47Q9UFB7 747 aaPredicted RBP25.11■■□□□ 1.61
MECP2-218ENST00000629277 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
MECP2-218ENST00000629277 RRP1P56182 461 aaKnown RBP25.11■■□□□ 1.61
MECP2-218ENST00000629277 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
MECP2-218ENST00000629277 MYBBP1AQ9BQG0 1328 aaKnown RBP25.1■■□□□ 1.61
MECP2-218ENST00000629277 UHRF1BP1Q6BDS2 1440 aa25.1■■□□□ 1.61
MECP2-218ENST00000629277 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
MECP2-218ENST00000629277 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
MECP2-218ENST00000629277 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
MECP2-218ENST00000629277 BRD4O60885 1362 aaPredicted RBP25.06■■□□□ 1.6
MECP2-218ENST00000629277 RCAN3Q9UKA8 241 aa25.05■■□□□ 1.6
MECP2-218ENST00000629277 FBLN2P98095 1184 aa25.04■■□□□ 1.6
MECP2-218ENST00000629277 RALBP1Q15311 655 aa25.04■■□□□ 1.6
MECP2-218ENST00000629277 CDCA7LQ96GN5 454 aa25.04■■□□□ 1.6
MECP2-218ENST00000629277 ITSN2Q9NZM3 1697 aa25.02■■□□□ 1.6
MECP2-218ENST00000629277 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
MECP2-218ENST00000629277 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
MECP2-218ENST00000629277 HNRNPMP52272 730 aaKnown RBP eCLIP25■■□□□ 1.591e-6■□□□□ 9.4
MECP2-218ENST00000629277 IFT140Q96RY7 1462 aa25■■□□□ 1.59
MECP2-218ENST00000629277 SKAP1Q86WV1 359 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms