RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 PLCH2O75038 1416 aa33.67■■■□□ 2.98
UBE3A-218ENST00000629252 SIGLEC1Q9BZZ2 1709 aa33.66■■■□□ 2.98
UBE3A-218ENST00000629252 MYO5CQ9NQX4 1742 aa33.65■■■□□ 2.98
UBE3A-218ENST00000629252 LMTK3Q96Q04 1460 aa33.63■■■□□ 2.97
UBE3A-218ENST00000629252 CHIC1Q5VXU3 224 aa33.63■■■□□ 2.97
UBE3A-218ENST00000629252 CDK11AQ9UQ88 783 aaPredicted RBP33.62■■■□□ 2.97
UBE3A-218ENST00000629252 MAGI2Q86UL8 1455 aa33.62■■■□□ 2.97
UBE3A-218ENST00000629252 KIF14Q15058 1648 aa33.61■■■□□ 2.97
UBE3A-218ENST00000629252 EFCAB2Q5VUJ9 269 aa33.58■■■□□ 2.97
UBE3A-218ENST00000629252 FER1L4A9Z1Z3 1794 aa33.55■■■□□ 2.96
UBE3A-218ENST00000629252 HSPA2P54652 639 aa33.54■■■□□ 2.96
UBE3A-218ENST00000629252 ARHGAP5Q13017 1502 aa33.53■■■□□ 2.96
UBE3A-218ENST00000629252 FBXO41Q8TF61 875 aa33.53■■■□□ 2.96
UBE3A-218ENST00000629252 TROQ12816 1431 aaPredicted RBP33.53■■■□□ 2.96
UBE3A-218ENST00000629252 CLIP1P30622 1438 aa33.52■■■□□ 2.96
UBE3A-218ENST00000629252 LRRIQ1Q96JM4 1722 aa33.51■■■□□ 2.96
UBE3A-218ENST00000629252 MYT1LQ9UL68 1186 aa33.5■■■□□ 2.95
UBE3A-218ENST00000629252 C9orf84Q5VXU9 1444 aa33.48■■■□□ 2.95
UBE3A-218ENST00000629252 ATP10AO60312 1499 aa33.48■■■□□ 2.95
UBE3A-218ENST00000629252 ZNF518AQ6AHZ1 1483 aa33.44■■■□□ 2.94
UBE3A-218ENST00000629252 AFAP1Q8N556 730 aa33.42■■■□□ 2.94
UBE3A-218ENST00000629252 ARHGEF12Q9NZN5 1544 aa33.39■■■□□ 2.94
UBE3A-218ENST00000629252 CDC42BPBQ9Y5S2 1711 aa33.36■■■□□ 2.93
UBE3A-218ENST00000629252 KDM5CP41229 1560 aa33.35■■■□□ 2.93
UBE3A-218ENST00000629252 CEBPAP49715 358 aaPredicted RBP33.33■■■□□ 2.93
UBE3A-218ENST00000629252 CCDC18Q5T9S5 1454 aa33.32■■■□□ 2.92
UBE3A-218ENST00000629252 CASKIN1Q8WXD9 1431 aa33.32■■■□□ 2.92
UBE3A-218ENST00000629252 PREX2Q70Z35 1606 aa33.31■■■□□ 2.92
UBE3A-218ENST00000629252 DIP2CQ9Y2E4 1556 aa33.3■■■□□ 2.92
UBE3A-218ENST00000629252 PREX1Q8TCU6 1659 aa33.28■■■□□ 2.92
UBE3A-218ENST00000629252 ABCA6Q8N139 1617 aa33.27■■■□□ 2.92
UBE3A-218ENST00000629252 ABCC1P33527 1531 aa33.25■■■□□ 2.91
UBE3A-218ENST00000629252 TRAPPC8Q9Y2L5 1435 aa33.24■■■□□ 2.91
UBE3A-218ENST00000629252 ITSN2Q9NZM3 1697 aa33.23■■■□□ 2.91
UBE3A-218ENST00000629252 MLH3Q9UHC1 1453 aa33.2■■■□□ 2.91
UBE3A-218ENST00000629252 CDC42BPAQ5VT25 1732 aa33.2■■■□□ 2.91
UBE3A-218ENST00000629252 FYCO1Q9BQS8 1478 aa33.19■■■□□ 2.9
UBE3A-218ENST00000629252 ZNF777Q9ULD5 760 aaPredicted RBP33.19■■■□□ 2.9
UBE3A-218ENST00000629252 REREQ9P2R6 1566 aa33.17■■■□□ 2.9
UBE3A-218ENST00000629252 ESF1Q9H501 851 aaKnown RBP33.17■■■□□ 2.9
UBE3A-218ENST00000629252 UHRF1BP1Q6BDS2 1440 aa33.15■■■□□ 2.9
UBE3A-218ENST00000629252 CERKQ8TCT0 537 aa33.13■■■□□ 2.89
UBE3A-218ENST00000629252 KIDINS220Q9ULH0 1771 aa33.11■■■□□ 2.89
UBE3A-218ENST00000629252 C3P01024 1663 aa33.1■■■□□ 2.89
UBE3A-218ENST00000629252 AGLP35573 1532 aa33.08■■■□□ 2.89
UBE3A-218ENST00000629252 SYCP2Q9BX26 1530 aa33.07■■■□□ 2.89
UBE3A-218ENST00000629252 SAMD9LQ8IVG5 1584 aa33.07■■■□□ 2.88
UBE3A-218ENST00000629252 STRCQ7RTU9 1775 aa33.04■■■□□ 2.88
UBE3A-218ENST00000629252 SETD1BQ9UPS6 1966 aaKnown RBP33.03■■■□□ 2.88
UBE3A-218ENST00000629252 GPATCH8Q9UKJ3 1502 aaKnown RBP33.02■■■□□ 2.88
UBE3A-218ENST00000629252 HNRNPMP52272 730 aaKnown RBP eCLIP33.01■■■□□ 2.87
UBE3A-218ENST00000629252 DMRT2Q9Y5R5 561 aa33■■■□□ 2.87
UBE3A-218ENST00000629252 SPAG9O60271 1321 aaKnown RBP33■■■□□ 2.87
UBE3A-218ENST00000629252 SUPT6HQ7KZ85 1726 aaKnown RBP32.97■■■□□ 2.87
UBE3A-218ENST00000629252 CFDP1Q9UEE9 299 aaPredicted RBP32.97■■■□□ 2.87
UBE3A-218ENST00000629252 CCNB3Q8WWL7 1395 aa32.96■■■□□ 2.87
UBE3A-218ENST00000629252 MTUS2Q5JR59 1369 aa32.96■■■□□ 2.87
UBE3A-218ENST00000629252 CNTLNQ9NXG0 1405 aa32.95■■■□□ 2.87
UBE3A-218ENST00000629252 ATP7AQ04656 1500 aa32.92■■■□□ 2.86
UBE3A-218ENST00000629252 PLEKHH2Q8IVE3 1493 aa32.89■■■□□ 2.86
UBE3A-218ENST00000629252 INO80Q9ULG1 1556 aaPredicted RBP32.87■■■□□ 2.85
UBE3A-218ENST00000629252 KIAA1107Q9UPP5 1409 aa32.85■■■□□ 2.85
UBE3A-218ENST00000629252 MROH2AA6NES4 1674 aa32.85■■■□□ 2.85
UBE3A-218ENST00000629252 CLTCQ00610 1675 aaKnown RBP32.84■■■□□ 2.85
UBE3A-218ENST00000629252 A2MP01023 1474 aa32.83■■■□□ 2.85
UBE3A-218ENST00000629252 PTPRTO14522 1441 aa32.83■■■□□ 2.85
UBE3A-218ENST00000629252 ZMYM3Q14202 1370 aa32.83■■■□□ 2.85
UBE3A-218ENST00000629252 TIAM1Q13009 1591 aa32.8■■■□□ 2.84
UBE3A-218ENST00000629252 GGT6Q6P531 493 aa32.8■■■□□ 2.84
UBE3A-218ENST00000629252 ZNF644Q9H582 1327 aaPredicted RBP32.79■■■□□ 2.84
UBE3A-218ENST00000629252 PLXNC1O60486 1568 aa32.79■■■□□ 2.84
UBE3A-218ENST00000629252 NCOA1Q15788 1441 aa32.79■■■□□ 2.84
UBE3A-218ENST00000629252 NPATQ14207 1427 aa32.78■■■□□ 2.84
UBE3A-218ENST00000629252 EHBP1L1Q8N3D4 1523 aa32.78■■■□□ 2.84
UBE3A-218ENST00000629252 CAMSAP1Q5T5Y3 1602 aa32.77■■■□□ 2.84
UBE3A-218ENST00000629252 ADGBQ8N7X0 1667 aa32.74■■■□□ 2.83
UBE3A-218ENST00000629252 CEP162Q5TB80 1403 aa32.72■■■□□ 2.83
UBE3A-218ENST00000629252 MYO3AQ8NEV4 1616 aa32.71■■■□□ 2.83
UBE3A-218ENST00000629252 NCKAP5LQ9HCH0 1330 aa32.68■■■□□ 2.82
UBE3A-218ENST00000629252 LTBP4Q8N2S1 1624 aa32.66■■■□□ 2.82
UBE3A-218ENST00000629252 MBD5Q9P267 1494 aa32.66■■■□□ 2.82
UBE3A-218ENST00000629252 PTPRKQ15262 1439 aa32.65■■■□□ 2.82
UBE3A-218ENST00000629252 ZNF142P52746 1687 aaPredicted RBP32.64■■■□□ 2.82
UBE3A-218ENST00000629252 CEP170BQ9Y4F5 1589 aaPredicted RBP32.63■■■□□ 2.81
UBE3A-218ENST00000629252 DISP3Q9P2K9 1392 aa32.6■■■□□ 2.81
UBE3A-218ENST00000629252 NCOA2Q15596 1464 aa32.59■■■□□ 2.81
UBE3A-218ENST00000629252 CAMSAP2Q08AD1 1489 aa32.57■■■□□ 2.8
UBE3A-218ENST00000629252 RTEL1-TNFRSF6BF6WH68 1400 aa32.57■■■□□ 2.8
UBE3A-218ENST00000629252 ZNF335Q9H4Z2 1342 aaPredicted RBP32.56■■■□□ 2.8
UBE3A-218ENST00000629252 CCDC141Q6ZP82 1450 aa32.56■■■□□ 2.8
UBE3A-218ENST00000629252 KIF3BO15066 747 aa32.55■■■□□ 2.8
UBE3A-218ENST00000629252 PPP6R1Q9UPN7 881 aa32.55■■■□□ 2.8
UBE3A-218ENST00000629252 DHX29Q7Z478 1369 aaKnown RBP32.55■■■□□ 2.8
UBE3A-218ENST00000629252 PLA2R1Q13018 1463 aa32.54■■■□□ 2.8
UBE3A-218ENST00000629252 PKD2Q13563 968 aa32.52■■■□□ 2.8
UBE3A-218ENST00000629252 IQSEC2Q5JU85 1478 aa32.52■■■□□ 2.8
UBE3A-218ENST00000629252 TCOF1Q13428 1488 aaKnown RBP32.48■■■□□ 2.79
UBE3A-218ENST00000629252 A2ML1A8K2U0 1454 aa32.48■■■□□ 2.79
UBE3A-218ENST00000629252 KDM5DQ9BY66 1539 aa32.46■■■□□ 2.79
UBE3A-218ENST00000629252 FBXO31Q5XUX0 539 aaPredicted RBP32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms