RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 DENND4BO75064 1496 aaPredicted RBP21.58■■□□□ 1.04
PFDN5-220ENST00000628881 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
PFDN5-220ENST00000628881 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
PFDN5-220ENST00000628881 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
PFDN5-220ENST00000628881 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
PFDN5-220ENST00000628881 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
PFDN5-220ENST00000628881 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
PFDN5-220ENST00000628881 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
PFDN5-220ENST00000628881 SCAPERQ9BY12 1400 aa21.54■■□□□ 1.04
PFDN5-220ENST00000628881 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
PFDN5-220ENST00000628881 POGZQ7Z3K3 1410 aa21.51■■□□□ 1.03
PFDN5-220ENST00000628881 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
PFDN5-220ENST00000628881 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
PFDN5-220ENST00000628881 APLP2Q06481 763 aa21.5■■□□□ 1.03
PFDN5-220ENST00000628881 ABCC1P33527 1531 aa21.5■■□□□ 1.03
PFDN5-220ENST00000628881 ZMYM4Q5VZL5 1548 aa21.5■■□□□ 1.03
PFDN5-220ENST00000628881 KANK4Q5T7N3 995 aaPredicted RBP21.48■■□□□ 1.03
PFDN5-220ENST00000628881 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
PFDN5-220ENST00000628881 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
PFDN5-220ENST00000628881 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.03
PFDN5-220ENST00000628881 ARHGEF40Q8TER5 1519 aa21.44■■□□□ 1.02
PFDN5-220ENST00000628881 ARHGEF12Q9NZN5 1544 aa21.44■■□□□ 1.02
PFDN5-220ENST00000628881 ZNF777Q9ULD5 760 aaPredicted RBP21.43■■□□□ 1.02
PFDN5-220ENST00000628881 MAGI2Q86UL8 1455 aa21.43■■□□□ 1.02
PFDN5-220ENST00000628881 KDM5CP41229 1560 aa21.43■■□□□ 1.02
PFDN5-220ENST00000628881 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
PFDN5-220ENST00000628881 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
PFDN5-220ENST00000628881 SYCP2Q9BX26 1530 aa21.4■■□□□ 1.02
PFDN5-220ENST00000628881 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
PFDN5-220ENST00000628881 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.02
PFDN5-220ENST00000628881 AFAP1Q8N556 730 aa21.38■■□□□ 1.01
PFDN5-220ENST00000628881 YEATS2Q9ULM3 1422 aa21.38■■□□□ 1.01
PFDN5-220ENST00000628881 HECW2Q9P2P5 1572 aa21.37■■□□□ 1.01
PFDN5-220ENST00000628881 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
PFDN5-220ENST00000628881 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
PFDN5-220ENST00000628881 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
PFDN5-220ENST00000628881 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
PFDN5-220ENST00000628881 CAMSAP2Q08AD1 1489 aa21.33■■□□□ 1.01
PFDN5-220ENST00000628881 MIA2Q96PC5 1412 aa21.31■■□□□ 1
PFDN5-220ENST00000628881 KDM4FA0A1W2PPD8 638 aa21.31■■□□□ 1
PFDN5-220ENST00000628881 MBD5Q9P267 1494 aa21.31■■□□□ 1
PFDN5-220ENST00000628881 KIDINS220Q9ULH0 1771 aa21.29■■□□□ 1
PFDN5-220ENST00000628881 ATP10AO60312 1499 aa21.29■■□□□ 1
PFDN5-220ENST00000628881 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
PFDN5-220ENST00000628881 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
PFDN5-220ENST00000628881 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
PFDN5-220ENST00000628881 ABCA6Q8N139 1617 aa21.28■■□□□ 1
PFDN5-220ENST00000628881 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
PFDN5-220ENST00000628881 INO80Q9ULG1 1556 aaPredicted RBP21.26■□□□□ 0.99
PFDN5-220ENST00000628881 SIGLEC1Q9BZZ2 1709 aa21.26■□□□□ 0.99
PFDN5-220ENST00000628881 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
PFDN5-220ENST00000628881 ATP7AQ04656 1500 aa21.25■□□□□ 0.99
PFDN5-220ENST00000628881 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
PFDN5-220ENST00000628881 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
PFDN5-220ENST00000628881 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
PFDN5-220ENST00000628881 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
PFDN5-220ENST00000628881 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
PFDN5-220ENST00000628881 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
PFDN5-220ENST00000628881 FGD6Q6ZV73 1430 aa21.22■□□□□ 0.99
PFDN5-220ENST00000628881 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
PFDN5-220ENST00000628881 ADAMTSL3P82987 1691 aa21.21■□□□□ 0.99
PFDN5-220ENST00000628881 RTEL1-TNFRSF6BF6WH68 1400 aa21.2■□□□□ 0.98
PFDN5-220ENST00000628881 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
PFDN5-220ENST00000628881 AGLP35573 1532 aa21.16■□□□□ 0.98
PFDN5-220ENST00000628881 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
PFDN5-220ENST00000628881 MADDQ8WXG6 1647 aa21.15■□□□□ 0.98
PFDN5-220ENST00000628881 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.98
PFDN5-220ENST00000628881 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
PFDN5-220ENST00000628881 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
PFDN5-220ENST00000628881 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
PFDN5-220ENST00000628881 A2MP01023 1474 aa21.13■□□□□ 0.97
PFDN5-220ENST00000628881 MLECQ14165 292 aa21.11■□□□□ 0.97
PFDN5-220ENST00000628881 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
PFDN5-220ENST00000628881 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
PFDN5-220ENST00000628881 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
PFDN5-220ENST00000628881 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
PFDN5-220ENST00000628881 FER1L4A9Z1Z3 1794 aa21.09■□□□□ 0.97
PFDN5-220ENST00000628881 ABCC5O15440 1437 aa21.09■□□□□ 0.97
PFDN5-220ENST00000628881 DAPK1P53355 1430 aa21.08■□□□□ 0.97
PFDN5-220ENST00000628881 RIMS1Q86UR5 1692 aaKnown RBP21.08■□□□□ 0.96
PFDN5-220ENST00000628881 PTPRMP28827 1452 aa21.07■□□□□ 0.96
PFDN5-220ENST00000628881 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
PFDN5-220ENST00000628881 FAM50AQ14320 339 aaKnown RBP21.04■□□□□ 0.96
PFDN5-220ENST00000628881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
PFDN5-220ENST00000628881 DUOX2Q9NRD8 1548 aa20.98■□□□□ 0.95
PFDN5-220ENST00000628881 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
PFDN5-220ENST00000628881 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
PFDN5-220ENST00000628881 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
PFDN5-220ENST00000628881 ESF1Q9H501 851 aaKnown RBP20.96■□□□□ 0.95
PFDN5-220ENST00000628881 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
PFDN5-220ENST00000628881 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
PFDN5-220ENST00000628881 ADGRL2O95490 1459 aa20.95■□□□□ 0.94
PFDN5-220ENST00000628881 KIF3BO15066 747 aa20.95■□□□□ 0.94
PFDN5-220ENST00000628881 GGT6Q6P531 493 aa20.95■□□□□ 0.94
PFDN5-220ENST00000628881 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
PFDN5-220ENST00000628881 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
PFDN5-220ENST00000628881 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
PFDN5-220ENST00000628881 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
PFDN5-220ENST00000628881 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
PFDN5-220ENST00000628881 ERBINQ96RT1 1412 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms