RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 SETD1BQ9UPS6 1966 aaKnown RBP5.92□□□□□ -1.46
SCARNA4.1-201ENST00000628597 CPS1P31327 1500 aa5.92□□□□□ -1.46
SCARNA4.1-201ENST00000628597 ABCA10Q8WWZ4 1543 aa5.92□□□□□ -1.46
SCARNA4.1-201ENST00000628597 TTC37Q6PGP7 1564 aa5.92□□□□□ -1.46
SCARNA4.1-201ENST00000628597 TRAPPC8Q9Y2L5 1435 aa5.91□□□□□ -1.46
SCARNA4.1-201ENST00000628597 CCDC88BA6NC98 1476 aa5.91□□□□□ -1.46
SCARNA4.1-201ENST00000628597 KDM5BQ9UGL1 1544 aa5.91□□□□□ -1.46
SCARNA4.1-201ENST00000628597 CCDC125Q86Z20 511 aa5.91□□□□□ -1.46
SCARNA4.1-201ENST00000628597 ZNF784Q8NCA9 323 aaPredicted RBP5.91□□□□□ -1.46
SCARNA4.1-201ENST00000628597 TOP2AP11388 1531 aaKnown RBP5.9□□□□□ -1.46
SCARNA4.1-201ENST00000628597 CUL7Q14999 1698 aa5.9□□□□□ -1.47
SCARNA4.1-201ENST00000628597 ATAD2Q6PL18 1390 aa5.9□□□□□ -1.47
SCARNA4.1-201ENST00000628597 PRELPP51888 382 aa5.89□□□□□ -1.47
SCARNA4.1-201ENST00000628597 CUX1P39880 1505 aa5.89□□□□□ -1.47
SCARNA4.1-201ENST00000628597 CAMSAP1Q5T5Y3 1602 aa5.88□□□□□ -1.47
SCARNA4.1-201ENST00000628597 CDK12Q9NYV4 1490 aaPredicted RBP5.88□□□□□ -1.47
SCARNA4.1-201ENST00000628597 ABCA5Q8WWZ7 1642 aa5.88□□□□□ -1.47
SCARNA4.1-201ENST00000628597 SHANK2Q9UPX8 1470 aa5.87□□□□□ -1.47
SCARNA4.1-201ENST00000628597 LRRC7Q96NW7 1537 aa5.86□□□□□ -1.47
SCARNA4.1-201ENST00000628597 RBM6P78332 1123 aaKnown RBP5.86□□□□□ -1.47
SCARNA4.1-201ENST00000628597 RUSC2Q8N2Y8 1516 aa5.85□□□□□ -1.47
SCARNA4.1-201ENST00000628597 NEO1Q92859 1461 aa5.85□□□□□ -1.47
SCARNA4.1-201ENST00000628597 NGLY1Q96IV0 654 aa5.85□□□□□ -1.47
SCARNA4.1-201ENST00000628597 FER1L4A9Z1Z3 1794 aa5.85□□□□□ -1.47
SCARNA4.1-201ENST00000628597 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.47
SCARNA4.1-201ENST00000628597 DENND4BO75064 1496 aaPredicted RBP5.84□□□□□ -1.47
SCARNA4.1-201ENST00000628597 JCADQ9P266 1359 aa5.84□□□□□ -1.47
SCARNA4.1-201ENST00000628597 HRCP23327 699 aa5.84□□□□□ -1.47
SCARNA4.1-201ENST00000628597 PSDA5PKW4 1024 aaPredicted RBP5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 GIGYF1O75420 1035 aaPredicted RBP5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 TNS4Q8IZW8 715 aa5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 QTRT2Q9H974 415 aaKnown RBP5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 PLA2R1Q13018 1463 aa5.83□□□□□ -1.48
SCARNA4.1-201ENST00000628597 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
SCARNA4.1-201ENST00000628597 MYT1LQ9UL68 1186 aa5.82□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ERICH3Q5RHP9 1530 aa5.82□□□□□ -1.48
SCARNA4.1-201ENST00000628597 LRP5O75197 1615 aa5.81□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
SCARNA4.1-201ENST00000628597 SPATA31A6Q5VVP1 1343 aa5.81□□□□□ -1.48
SCARNA4.1-201ENST00000628597 FAM9AQ8IZU1 332 aaPredicted RBP5.81□□□□□ -1.48
SCARNA4.1-201ENST00000628597 WRNQ14191 1432 aaPredicted RBP eCLIP5.81□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ZFYVE16Q7Z3T8 1539 aa5.8□□□□□ -1.48
SCARNA4.1-201ENST00000628597 RAPGEF2Q9Y4G8 1499 aa5.8□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ALKQ9UM73 1620 aa5.8□□□□□ -1.48
SCARNA4.1-201ENST00000628597 FHOD3Q2V2M9 1422 aa5.8□□□□□ -1.48
SCARNA4.1-201ENST00000628597 TCOF1Q13428 1488 aaKnown RBP5.79□□□□□ -1.48
SCARNA4.1-201ENST00000628597 MAGI2Q86UL8 1455 aa5.79□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ANKLE2Q86XL3 938 aa5.79□□□□□ -1.48
SCARNA4.1-201ENST00000628597 RGS12O14924 1447 aa5.79□□□□□ -1.48
SCARNA4.1-201ENST00000628597 EFCAB5A4FU69 1503 aa5.79□□□□□ -1.48
SCARNA4.1-201ENST00000628597 AFF2P51816 1311 aa5.78□□□□□ -1.48
SCARNA4.1-201ENST00000628597 ATP10AO60312 1499 aa5.78□□□□□ -1.48
SCARNA4.1-201ENST00000628597 RAPGEF6Q8TEU7 1601 aa5.78□□□□□ -1.48
SCARNA4.1-201ENST00000628597 PPP1R1BQ9UD71 204 aaPredicted RBP5.78□□□□□ -1.48
SCARNA4.1-201ENST00000628597 C9orf84Q5VXU9 1444 aa5.77□□□□□ -1.49
SCARNA4.1-201ENST00000628597 DEFB132Q7Z7B7 95 aa5.77□□□□□ -1.49
SCARNA4.1-201ENST00000628597 ARID3CA6NKF2 412 aa5.76□□□□□ -1.49
SCARNA4.1-201ENST00000628597 COL13A1Q5TAT6 717 aaPredicted RBP5.76□□□□□ -1.49
SCARNA4.1-201ENST00000628597 FRMPD1Q5SYB0 1578 aa5.76□□□□□ -1.49
SCARNA4.1-201ENST00000628597 NPATQ14207 1427 aa5.75□□□□□ -1.49
SCARNA4.1-201ENST00000628597 CNTLNQ9NXG0 1405 aa5.74□□□□□ -1.49
SCARNA4.1-201ENST00000628597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.74□□□□□ -1.49
SCARNA4.1-201ENST00000628597 HNRNPUL2Q1KMD3 747 aaKnown RBP5.74□□□□□ -1.49
SCARNA4.1-201ENST00000628597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCARNA4.1-201ENST00000628597 C8orf37Q96NL8 207 aa5.73□□□□□ -1.49
SCARNA4.1-201ENST00000628597 ZMYM3Q14202 1370 aa5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 HSPA6P17066 643 aa5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 R3HDM1Q15032 1099 aaKnown RBP5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 NHSL1Q5SYE7 1610 aa5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 RNF17Q9BXT8 1623 aaKnown RBP5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 BLMP54132 1417 aaPredicted RBP5.72□□□□□ -1.49
SCARNA4.1-201ENST00000628597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCARNA4.1-201ENST00000628597 BAG6P46379 1132 aa5.7□□□□□ -1.5
SCARNA4.1-201ENST00000628597 THEMISQ8N1K5 641 aaPredicted RBP5.7□□□□□ -1.5
SCARNA4.1-201ENST00000628597 WWC3Q9ULE0 1092 aa5.7□□□□□ -1.5
SCARNA4.1-201ENST00000628597 LRP6O75581 1613 aa5.7□□□□□ -1.5
SCARNA4.1-201ENST00000628597 CDK13Q14004 1512 aaKnown RBP5.69□□□□□ -1.5
SCARNA4.1-201ENST00000628597 ZMYM4Q5VZL5 1548 aa5.69□□□□□ -1.5
SCARNA4.1-201ENST00000628597 FGD6Q6ZV73 1430 aa5.69□□□□□ -1.5
SCARNA4.1-201ENST00000628597 TRPC5Q9UL62 973 aaPredicted RBP5.69□□□□□ -1.5
SCARNA4.1-201ENST00000628597 NPHP4O75161 1426 aaPredicted RBP5.68□□□□□ -1.5
SCARNA4.1-201ENST00000628597 SLAIN2Q9P270 581 aa5.68□□□□□ -1.5
SCARNA4.1-201ENST00000628597 C3P01024 1663 aa5.68□□□□□ -1.5
SCARNA4.1-201ENST00000628597 SIGLEC1Q9BZZ2 1709 aa5.68□□□□□ -1.5
SCARNA4.1-201ENST00000628597 NINLQ9Y2I6 1382 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 ABCA8O94911 1581 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 VWDEQ8N2E2 1590 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 SCAPERQ9BY12 1400 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 DISP1Q96F81 1524 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
SCARNA4.1-201ENST00000628597 HECW1Q76N89 1606 aa5.66□□□□□ -1.5
SCARNA4.1-201ENST00000628597 USP21Q9UK80 565 aa5.66□□□□□ -1.5
SCARNA4.1-201ENST00000628597 CEP170BQ9Y4F5 1589 aaPredicted RBP5.66□□□□□ -1.5
SCARNA4.1-201ENST00000628597 ABCA9Q8IUA7 1624 aa5.66□□□□□ -1.5
SCARNA4.1-201ENST00000628597 FAM83GA6ND36 823 aa5.65□□□□□ -1.5
SCARNA4.1-201ENST00000628597 SPON1Q9HCB6 807 aa5.65□□□□□ -1.5
SCARNA4.1-201ENST00000628597 BCL9LQ86UU0 1499 aa5.64□□□□□ -1.51
SCARNA4.1-201ENST00000628597 PROSER2Q86WR7 435 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms