RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 BAZ1BQ9UIG0 1483 aaKnown RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 RRBP1Q9P2E9 1410 aaKnown RBP2.5□□□□□ -2.01
TCF4-264ENST00000628391 GOLGA6L3A6NEY3 463 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 LETM1O95202 739 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 IRX6P78412 446 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 IRX3P78415 501 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 HNRNPUQ00839 825 aaKnown RBP eCLIP2.49□□□□□ -2.01
TCF4-264ENST00000628391 SLC20A2Q08357 652 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 AMER1Q5JTC6 1135 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 PPP4R3BQ5MIZ7 849 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 CNPY4Q8N129 248 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 SECISBP2LQ93073 1101 aaKnown RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 TRIM44Q96DX7 344 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 ARID3AQ99856 593 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 TMEM51Q9NW97 253 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 ISY1Q9ULR0 285 aaKnown RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 CTTNBP2Q8WZ74 1663 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 BAZ1AQ9NRL2 1556 aaPredicted RBP2.49□□□□□ -2.01
TCF4-264ENST00000628391 PHLDB1Q86UU1 1377 aa2.49□□□□□ -2.01
TCF4-264ENST00000628391 RNF123Q5XPI4 1314 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 ESPNB1AK53 854 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 PTMAP06454 111 aaKnown RBP2.48□□□□□ -2.01
TCF4-264ENST00000628391 AXDND1Q5T1B0 1012 aaPredicted RBP2.48□□□□□ -2.01
TCF4-264ENST00000628391 RGS22Q8NE09 1264 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 ZNF622Q969S3 477 aaKnown RBP eCLIP2.48□□□□□ -2.013e-6■■■■□ 24.2
TCF4-264ENST00000628391 ZNF830Q96NB3 372 aaPredicted RBP2.48□□□□□ -2.01
TCF4-264ENST00000628391 GTPBP4Q9BZE4 634 aaKnown RBP2.48□□□□□ -2.01
TCF4-264ENST00000628391 ZHX1Q9UKY1 873 aaPredicted RBP2.48□□□□□ -2.01
TCF4-264ENST00000628391 CCDC144AA2RUR9 1427 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 FHAD1B1AJZ9 1412 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 SCAPERQ9BY12 1400 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 CNTLNQ9NXG0 1405 aa2.48□□□□□ -2.01
TCF4-264ENST00000628391 SCRIBQ14160 1630 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 FSD2A1L4K1 749 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 CLGNO14967 610 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 HMGB1P09429 215 aaKnown RBP2.47□□□□□ -2.01
TCF4-264ENST00000628391 PTMSP20962 102 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 PDE4AP27815 886 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 MMP14P50281 582 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 HNRNPUL2Q1KMD3 747 aaKnown RBP2.47□□□□□ -2.01
TCF4-264ENST00000628391 GRIPAP1Q4V328 841 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 KIAA1211Q6ZU35 1233 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 WWC1Q8IX03 1113 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 BACH2Q9BYV9 841 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 YY1AP1Q9H869 796 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 CLIP1P30622 1438 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 AKNAQ7Z591 1439 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 SYNJ1O43426 1573 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 ABCC8Q09428 1581 aa2.47□□□□□ -2.01
TCF4-264ENST00000628391 DYNC1I1O14576 645 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 CLSTN1O94985 981 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 MRE11P49959 708 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 DDX10Q13206 875 aaKnown RBP2.46□□□□□ -2.02
TCF4-264ENST00000628391 TICAM2Q86XR7 235 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 DNAJC2Q99543 621 aaKnown RBP2.46□□□□□ -2.02
TCF4-264ENST00000628391 CCDC94Q9BW85 323 aaPredicted RBP2.46□□□□□ -2.02
TCF4-264ENST00000628391 TSPYL1Q9H0U9 437 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 TAOK2Q9UL54 1235 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 CFAP65Q6ZU64 1925 aaKnown RBP2.46□□□□□ -2.02
TCF4-264ENST00000628391 NINLQ9Y2I6 1382 aa2.46□□□□□ -2.02
TCF4-264ENST00000628391 UNC13AQ9UPW8 1703 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 ERBB4Q15303 1308 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 VGLL3A8MV65 326 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 FRAT2O75474 233 aaPredicted RBP2.45□□□□□ -2.02
TCF4-264ENST00000628391 OFD1O75665 1012 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 PHF14O94880 888 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 ZSCAN20P17040 1043 aaPredicted RBP2.45□□□□□ -2.02
TCF4-264ENST00000628391 MCCP23508 829 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 RIPK4P57078 832 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 FAM193AP78312 1265 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 FOXD1Q16676 465 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 DNTTIP2Q5QJE6 756 aaKnown RBP2.45□□□□□ -2.02
TCF4-264ENST00000628391 PLCD3Q8N3E9 789 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 CEP120Q8N960 986 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 POGKQ9P215 609 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 NUDCQ9Y266 331 aa2.45□□□□□ -2.02
TCF4-264ENST00000628391 CCDC9Q9Y3X0 531 aaKnown RBP2.45□□□□□ -2.02
TCF4-264ENST00000628391 KTN1Q86UP2 1357 aaKnown RBP2.45□□□□□ -2.02
TCF4-264ENST00000628391 UQCRHLA0A096LP55 91 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 CCDC66A2RUB6 948 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 UQCRHP07919 91 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 XRCC6P12956 609 aaKnown RBP eCLIP2.44□□□□□ -2.02
TCF4-264ENST00000628391 PSEN1P49768 467 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 CCDC173Q0VFZ6 552 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 RALBP1Q15311 655 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 CC2D1BQ5T0F9 858 aaKnown RBP2.44□□□□□ -2.02
TCF4-264ENST00000628391 ZSCAN30Q86W11 494 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 MYH16Q9H6N6 1097 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 PRDM10Q9NQV6 1147 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 GEMIN8Q9NWZ8 242 aaKnown RBP2.44□□□□□ -2.02
TCF4-264ENST00000628391 HDAC5Q9UQL6 1122 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.44□□□□□ -2.02
TCF4-264ENST00000628391 IBTKQ9P2D0 1353 aaPredicted RBP2.44□□□□□ -2.02
TCF4-264ENST00000628391 CFAP43Q8NDM7 1665 aa2.44□□□□□ -2.02
TCF4-264ENST00000628391 MYOM3Q5VTT5 1437 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 ZMYM4Q5VZL5 1548 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 KDM5BQ9UGL1 1544 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 HECW1Q76N89 1606 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 APPP05067 770 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms