RNA–Protein interactions for RNA: ENST00000628360.1

TCF4-263, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-263ENST00000628360 ARAP3Q8WWN8 1544 aa13.38□□□□□ -0.27
TCF4-263ENST00000628360 KIF21BO75037 1637 aa13.37□□□□□ -0.27
TCF4-263ENST00000628360 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
TCF4-263ENST00000628360 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
TCF4-263ENST00000628360 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
TCF4-263ENST00000628360 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.27
TCF4-263ENST00000628360 NEO1Q92859 1461 aa13.32□□□□□ -0.28
TCF4-263ENST00000628360 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
TCF4-263ENST00000628360 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
TCF4-263ENST00000628360 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
TCF4-263ENST00000628360 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
TCF4-263ENST00000628360 FANCAO15360 1455 aa13.28□□□□□ -0.28
TCF4-263ENST00000628360 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
TCF4-263ENST00000628360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.29
TCF4-263ENST00000628360 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
TCF4-263ENST00000628360 TTC37Q6PGP7 1564 aa13.26□□□□□ -0.29
TCF4-263ENST00000628360 PTPRMP28827 1452 aa13.24□□□□□ -0.29
TCF4-263ENST00000628360 ARHGAP35Q9NRY4 1499 aa13.24□□□□□ -0.29
TCF4-263ENST00000628360 FMN1Q68DA7 1419 aa13.23□□□□□ -0.29
TCF4-263ENST00000628360 MLECQ14165 292 aa13.23□□□□□ -0.29
TCF4-263ENST00000628360 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
TCF4-263ENST00000628360 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
TCF4-263ENST00000628360 SCAPERQ9BY12 1400 aa13.21□□□□□ -0.3
TCF4-263ENST00000628360 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
TCF4-263ENST00000628360 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 ARHGEF40Q8TER5 1519 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 PLCH2O75038 1416 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
TCF4-263ENST00000628360 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
TCF4-263ENST00000628360 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
TCF4-263ENST00000628360 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
TCF4-263ENST00000628360 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
TCF4-263ENST00000628360 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
TCF4-263ENST00000628360 KIF14Q15058 1648 aa13.16□□□□□ -0.3
TCF4-263ENST00000628360 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
TCF4-263ENST00000628360 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
TCF4-263ENST00000628360 CLIP1P30622 1438 aa13.14□□□□□ -0.31
TCF4-263ENST00000628360 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
TCF4-263ENST00000628360 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
TCF4-263ENST00000628360 HSPA2P54652 639 aa13.14□□□□□ -0.31
TCF4-263ENST00000628360 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
TCF4-263ENST00000628360 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
TCF4-263ENST00000628360 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
TCF4-263ENST00000628360 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
TCF4-263ENST00000628360 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
TCF4-263ENST00000628360 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
TCF4-263ENST00000628360 POLA2Q14181 598 aa13.11□□□□□ -0.31
TCF4-263ENST00000628360 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
TCF4-263ENST00000628360 ATP10AO60312 1499 aa13.1□□□□□ -0.31
TCF4-263ENST00000628360 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
TCF4-263ENST00000628360 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
TCF4-263ENST00000628360 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
TCF4-263ENST00000628360 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
TCF4-263ENST00000628360 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
TCF4-263ENST00000628360 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
TCF4-263ENST00000628360 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
TCF4-263ENST00000628360 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
TCF4-263ENST00000628360 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
TCF4-263ENST00000628360 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
TCF4-263ENST00000628360 CDC42BPBQ9Y5S2 1711 aa13.04□□□□□ -0.32
TCF4-263ENST00000628360 ARHGEF12Q9NZN5 1544 aa13.03□□□□□ -0.32
TCF4-263ENST00000628360 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
TCF4-263ENST00000628360 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
TCF4-263ENST00000628360 KDM5CP41229 1560 aa13.02□□□□□ -0.33
TCF4-263ENST00000628360 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCF4-263ENST00000628360 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
TCF4-263ENST00000628360 DIP2CQ9Y2E4 1556 aa13□□□□□ -0.33
TCF4-263ENST00000628360 ABCC1P33527 1531 aa12.99□□□□□ -0.33
TCF4-263ENST00000628360 ABCA6Q8N139 1617 aa12.99□□□□□ -0.33
TCF4-263ENST00000628360 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
TCF4-263ENST00000628360 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
TCF4-263ENST00000628360 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
TCF4-263ENST00000628360 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
TCF4-263ENST00000628360 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
TCF4-263ENST00000628360 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
TCF4-263ENST00000628360 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
TCF4-263ENST00000628360 MTUS2Q5JR59 1369 aa12.96□□□□□ -0.33
TCF4-263ENST00000628360 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
TCF4-263ENST00000628360 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
TCF4-263ENST00000628360 UHRF1BP1Q6BDS2 1440 aa12.95□□□□□ -0.34
TCF4-263ENST00000628360 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
TCF4-263ENST00000628360 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
TCF4-263ENST00000628360 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
TCF4-263ENST00000628360 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
TCF4-263ENST00000628360 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
TCF4-263ENST00000628360 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
TCF4-263ENST00000628360 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
TCF4-263ENST00000628360 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
TCF4-263ENST00000628360 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
TCF4-263ENST00000628360 AGLP35573 1532 aa12.92□□□□□ -0.34
TCF4-263ENST00000628360 C3P01024 1663 aa12.9□□□□□ -0.34
TCF4-263ENST00000628360 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
TCF4-263ENST00000628360 GGT6Q6P531 493 aa12.9□□□□□ -0.34
TCF4-263ENST00000628360 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
TCF4-263ENST00000628360 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
TCF4-263ENST00000628360 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
TCF4-263ENST00000628360 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms