RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
TCF4-262ENST00000628078 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
TCF4-262ENST00000628078 KIF14Q15058 1648 aa22.19■■□□□ 1.14
TCF4-262ENST00000628078 HSPA2P54652 639 aa22.18■■□□□ 1.14
TCF4-262ENST00000628078 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
TCF4-262ENST00000628078 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
TCF4-262ENST00000628078 MYO5CQ9NQX4 1742 aa22.17■■□□□ 1.14
TCF4-262ENST00000628078 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
TCF4-262ENST00000628078 POGZQ7Z3K3 1410 aa22.14■■□□□ 1.14
TCF4-262ENST00000628078 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
TCF4-262ENST00000628078 LMTK3Q96Q04 1460 aa22.14■■□□□ 1.13
TCF4-262ENST00000628078 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
TCF4-262ENST00000628078 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
TCF4-262ENST00000628078 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
TCF4-262ENST00000628078 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
TCF4-262ENST00000628078 CEBPAP49715 358 aaPredicted RBP22.09■■□□□ 1.13
TCF4-262ENST00000628078 CLIP1P30622 1438 aa22.08■■□□□ 1.13
TCF4-262ENST00000628078 ATP10AO60312 1499 aa22.08■■□□□ 1.12
TCF4-262ENST00000628078 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
TCF4-262ENST00000628078 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
TCF4-262ENST00000628078 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
TCF4-262ENST00000628078 C9orf84Q5VXU9 1444 aa22.03■■□□□ 1.12
TCF4-262ENST00000628078 CASKIN1Q8WXD9 1431 aa22■■□□□ 1.11
TCF4-262ENST00000628078 ZNF777Q9ULD5 760 aaPredicted RBP22■■□□□ 1.11
TCF4-262ENST00000628078 ZNF518AQ6AHZ1 1483 aa22■■□□□ 1.11
TCF4-262ENST00000628078 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
TCF4-262ENST00000628078 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
TCF4-262ENST00000628078 KDM5CP41229 1560 aa21.95■■□□□ 1.1
TCF4-262ENST00000628078 CCDC18Q5T9S5 1454 aa21.94■■□□□ 1.1
TCF4-262ENST00000628078 DIP2CQ9Y2E4 1556 aa21.94■■□□□ 1.1
TCF4-262ENST00000628078 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
TCF4-262ENST00000628078 ABCA6Q8N139 1617 aa21.92■■□□□ 1.1
TCF4-262ENST00000628078 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
TCF4-262ENST00000628078 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.17e-6■■■□□ 17
TCF4-262ENST00000628078 ITSN2Q9NZM3 1697 aa21.9■■□□□ 1.1
TCF4-262ENST00000628078 ABCC1P33527 1531 aa21.9■■□□□ 1.1
TCF4-262ENST00000628078 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
TCF4-262ENST00000628078 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
TCF4-262ENST00000628078 MLH3Q9UHC1 1453 aa21.88■■□□□ 1.09
TCF4-262ENST00000628078 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
TCF4-262ENST00000628078 KIDINS220Q9ULH0 1771 aa21.85■■□□□ 1.09
TCF4-262ENST00000628078 CERKQ8TCT0 537 aa21.85■■□□□ 1.09
TCF4-262ENST00000628078 GPATCH8Q9UKJ3 1502 aaKnown RBP21.83■■□□□ 1.09
TCF4-262ENST00000628078 SAMD9LQ8IVG5 1584 aa21.82■■□□□ 1.08
TCF4-262ENST00000628078 C3P01024 1663 aa21.82■■□□□ 1.08
TCF4-262ENST00000628078 CFDP1Q9UEE9 299 aaPredicted RBP21.81■■□□□ 1.08
TCF4-262ENST00000628078 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
TCF4-262ENST00000628078 UHRF1BP1Q6BDS2 1440 aa21.8■■□□□ 1.08
TCF4-262ENST00000628078 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
TCF4-262ENST00000628078 REREQ9P2R6 1566 aa21.8■■□□□ 1.08
TCF4-262ENST00000628078 STRCQ7RTU9 1775 aa21.79■■□□□ 1.08
TCF4-262ENST00000628078 SETD1BQ9UPS6 1966 aaKnown RBP21.78■■□□□ 1.08
TCF4-262ENST00000628078 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
TCF4-262ENST00000628078 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.08
TCF4-262ENST00000628078 AGLP35573 1532 aa21.77■■□□□ 1.08
TCF4-262ENST00000628078 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
TCF4-262ENST00000628078 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
TCF4-262ENST00000628078 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
TCF4-262ENST00000628078 GGT6Q6P531 493 aa21.72■■□□□ 1.07
TCF4-262ENST00000628078 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
TCF4-262ENST00000628078 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
TCF4-262ENST00000628078 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
TCF4-262ENST00000628078 A2MP01023 1474 aa21.66■■□□□ 1.06
TCF4-262ENST00000628078 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
TCF4-262ENST00000628078 KIAA1107Q9UPP5 1409 aa21.66■■□□□ 1.06
TCF4-262ENST00000628078 PLEKHH2Q8IVE3 1493 aa21.65■■□□□ 1.06
TCF4-262ENST00000628078 CEP162Q5TB80 1403 aa21.64■■□□□ 1.06
TCF4-262ENST00000628078 TIAM1Q13009 1591 aa21.64■■□□□ 1.05
TCF4-262ENST00000628078 INO80Q9ULG1 1556 aaPredicted RBP21.64■■□□□ 1.05
TCF4-262ENST00000628078 NCKAP5LQ9HCH0 1330 aa21.63■■□□□ 1.05
TCF4-262ENST00000628078 LOC105371045A0A1W2PR82 267 aa21.62■■□□□ 1.05
TCF4-262ENST00000628078 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
TCF4-262ENST00000628078 PTPRTO14522 1441 aa21.6■■□□□ 1.05
TCF4-262ENST00000628078 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
TCF4-262ENST00000628078 CAMSAP1Q5T5Y3 1602 aa21.59■■□□□ 1.05
TCF4-262ENST00000628078 PLXNC1O60486 1568 aa21.58■■□□□ 1.05
TCF4-262ENST00000628078 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
TCF4-262ENST00000628078 MBD5Q9P267 1494 aa21.58■■□□□ 1.04
TCF4-262ENST00000628078 NPATQ14207 1427 aa21.56■■□□□ 1.04
TCF4-262ENST00000628078 ADGBQ8N7X0 1667 aa21.56■■□□□ 1.04
TCF4-262ENST00000628078 KIF3BO15066 747 aa21.55■■□□□ 1.04
TCF4-262ENST00000628078 PTPRKQ15262 1439 aa21.54■■□□□ 1.04
TCF4-262ENST00000628078 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
TCF4-262ENST00000628078 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
TCF4-262ENST00000628078 FBXO31Q5XUX0 539 aaPredicted RBP21.51■■□□□ 1.03
TCF4-262ENST00000628078 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
TCF4-262ENST00000628078 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
TCF4-262ENST00000628078 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
TCF4-262ENST00000628078 CAMSAP2Q08AD1 1489 aa21.5■■□□□ 1.03
TCF4-262ENST00000628078 RTEL1-TNFRSF6BF6WH68 1400 aa21.48■■□□□ 1.03
TCF4-262ENST00000628078 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
TCF4-262ENST00000628078 CCDC141Q6ZP82 1450 aa21.46■■□□□ 1.03
TCF4-262ENST00000628078 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
TCF4-262ENST00000628078 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
TCF4-262ENST00000628078 DISP3Q9P2K9 1392 aa21.45■■□□□ 1.02
TCF4-262ENST00000628078 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
TCF4-262ENST00000628078 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
TCF4-262ENST00000628078 WASHC2CQ9Y4E1 1318 aa21.44■■□□□ 1.02
TCF4-262ENST00000628078 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
TCF4-262ENST00000628078 PKD2Q13563 968 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms