RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 SCAPERQ9BY12 1400 aa27.33■■□□□ 1.97
TRIM29-221ENST00000627238 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
TRIM29-221ENST00000627238 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
TRIM29-221ENST00000627238 TROQ12816 1431 aaPredicted RBP27.29■■□□□ 1.96
TRIM29-221ENST00000627238 KIF14Q15058 1648 aa27.29■■□□□ 1.96
TRIM29-221ENST00000627238 EFCAB2Q5VUJ9 269 aa27.27■■□□□ 1.96
TRIM29-221ENST00000627238 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
TRIM29-221ENST00000627238 ATP10AO60312 1499 aa27.24■■□□□ 1.95
TRIM29-221ENST00000627238 KDM5CP41229 1560 aa27.23■■□□□ 1.95
TRIM29-221ENST00000627238 ZNF518AQ6AHZ1 1483 aa27.23■■□□□ 1.95
TRIM29-221ENST00000627238 CLIP1P30622 1438 aa27.23■■□□□ 1.95
TRIM29-221ENST00000627238 FER1L4A9Z1Z3 1794 aa27.22■■□□□ 1.95
TRIM29-221ENST00000627238 ARHGEF12Q9NZN5 1544 aa27.22■■□□□ 1.95
TRIM29-221ENST00000627238 C9orf84Q5VXU9 1444 aa27.22■■□□□ 1.95
TRIM29-221ENST00000627238 ATP1B4Q9UN42 357 aaPredicted RBP27.2■■□□□ 1.94
TRIM29-221ENST00000627238 FBXO41Q8TF61 875 aa27.19■■□□□ 1.94
TRIM29-221ENST00000627238 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
TRIM29-221ENST00000627238 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
TRIM29-221ENST00000627238 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
TRIM29-221ENST00000627238 CDC42BPBQ9Y5S2 1711 aa27.16■■□□□ 1.94
TRIM29-221ENST00000627238 CASKIN1Q8WXD9 1431 aa27.16■■□□□ 1.94
TRIM29-221ENST00000627238 REREQ9P2R6 1566 aa27.15■■□□□ 1.94
TRIM29-221ENST00000627238 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
TRIM29-221ENST00000627238 MLH3Q9UHC1 1453 aa27.1■■□□□ 1.93
TRIM29-221ENST00000627238 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
TRIM29-221ENST00000627238 MLECQ14165 292 aa27.08■■□□□ 1.93
TRIM29-221ENST00000627238 ABCC1P33527 1531 aa27.07■■□□□ 1.92
TRIM29-221ENST00000627238 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
TRIM29-221ENST00000627238 PREX1Q8TCU6 1659 aa27.06■■□□□ 1.92
TRIM29-221ENST00000627238 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
TRIM29-221ENST00000627238 HSPA2P54652 639 aa27.05■■□□□ 1.92
TRIM29-221ENST00000627238 ABCA6Q8N139 1617 aa27.04■■□□□ 1.92
TRIM29-221ENST00000627238 ITSN2Q9NZM3 1697 aa27.04■■□□□ 1.92
TRIM29-221ENST00000627238 AGLP35573 1532 aa27.03■■□□□ 1.92
TRIM29-221ENST00000627238 CDC42BPAQ5VT25 1732 aa27.02■■□□□ 1.92
TRIM29-221ENST00000627238 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
TRIM29-221ENST00000627238 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
TRIM29-221ENST00000627238 SETD1BQ9UPS6 1966 aaKnown RBP26.97■■□□□ 1.91
TRIM29-221ENST00000627238 KIDINS220Q9ULH0 1771 aa26.96■■□□□ 1.91
TRIM29-221ENST00000627238 CEBPAP49715 358 aaPredicted RBP26.91■■□□□ 1.9
TRIM29-221ENST00000627238 C3P01024 1663 aa26.9■■□□□ 1.9
TRIM29-221ENST00000627238 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
TRIM29-221ENST00000627238 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
TRIM29-221ENST00000627238 SAMD9LQ8IVG5 1584 aa26.89■■□□□ 1.9
TRIM29-221ENST00000627238 MYT1LQ9UL68 1186 aa26.89■■□□□ 1.9
TRIM29-221ENST00000627238 STRCQ7RTU9 1775 aa26.88■■□□□ 1.89
TRIM29-221ENST00000627238 CNTLNQ9NXG0 1405 aa26.85■■□□□ 1.89
TRIM29-221ENST00000627238 KIAA1107Q9UPP5 1409 aa26.85■■□□□ 1.89
TRIM29-221ENST00000627238 CERKQ8TCT0 537 aa26.84■■□□□ 1.89
TRIM29-221ENST00000627238 SYCP2Q9BX26 1530 aa26.84■■□□□ 1.89
TRIM29-221ENST00000627238 PLEKHH2Q8IVE3 1493 aa26.82■■□□□ 1.88
TRIM29-221ENST00000627238 DMRT2Q9Y5R5 561 aa26.82■■□□□ 1.88
TRIM29-221ENST00000627238 MROH2AA6NES4 1674 aa26.81■■□□□ 1.88
TRIM29-221ENST00000627238 PLXNC1O60486 1568 aa26.78■■□□□ 1.88
TRIM29-221ENST00000627238 INO80Q9ULG1 1556 aaPredicted RBP26.78■■□□□ 1.88
TRIM29-221ENST00000627238 ATP7AQ04656 1500 aa26.77■■□□□ 1.88
TRIM29-221ENST00000627238 SPAG9O60271 1321 aaKnown RBP26.76■■□□□ 1.87
TRIM29-221ENST00000627238 ESF1Q9H501 851 aaKnown RBP26.76■■□□□ 1.87
TRIM29-221ENST00000627238 PTPRTO14522 1441 aa26.75■■□□□ 1.87
TRIM29-221ENST00000627238 NPATQ14207 1427 aa26.74■■□□□ 1.87
TRIM29-221ENST00000627238 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
TRIM29-221ENST00000627238 CCNB3Q8WWL7 1395 aa26.73■■□□□ 1.87
TRIM29-221ENST00000627238 CFDP1Q9UEE9 299 aaPredicted RBP26.72■■□□□ 1.87
TRIM29-221ENST00000627238 MTUS2Q5JR59 1369 aa26.71■■□□□ 1.87
TRIM29-221ENST00000627238 HNRNPMP52272 730 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRIM29-221ENST00000627238 SUPT6HQ7KZ85 1726 aaKnown RBP26.7■■□□□ 1.86
TRIM29-221ENST00000627238 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.86
TRIM29-221ENST00000627238 A2MP01023 1474 aa26.69■■□□□ 1.86
TRIM29-221ENST00000627238 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
TRIM29-221ENST00000627238 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
TRIM29-221ENST00000627238 ZMYM3Q14202 1370 aa26.67■■□□□ 1.86
TRIM29-221ENST00000627238 ADGBQ8N7X0 1667 aa26.66■■□□□ 1.86
TRIM29-221ENST00000627238 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
TRIM29-221ENST00000627238 MBD5Q9P267 1494 aa26.65■■□□□ 1.86
TRIM29-221ENST00000627238 CLTCQ00610 1675 aaKnown RBP26.62■■□□□ 1.85
TRIM29-221ENST00000627238 RTEL1-TNFRSF6BF6WH68 1400 aa26.62■■□□□ 1.85
TRIM29-221ENST00000627238 ZNF142P52746 1687 aaPredicted RBP26.61■■□□□ 1.85
TRIM29-221ENST00000627238 PPP6R1Q9UPN7 881 aa26.61■■□□□ 1.85
TRIM29-221ENST00000627238 LTBP4Q8N2S1 1624 aa26.6■■□□□ 1.85
TRIM29-221ENST00000627238 IQSEC2Q5JU85 1478 aa26.59■■□□□ 1.85
TRIM29-221ENST00000627238 CAMSAP1Q5T5Y3 1602 aa26.58■■□□□ 1.85
TRIM29-221ENST00000627238 PTPRKQ15262 1439 aa26.57■■□□□ 1.84
TRIM29-221ENST00000627238 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
TRIM29-221ENST00000627238 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
TRIM29-221ENST00000627238 ZNF644Q9H582 1327 aaPredicted RBP26.55■■□□□ 1.84
TRIM29-221ENST00000627238 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
TRIM29-221ENST00000627238 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
TRIM29-221ENST00000627238 DHX29Q7Z478 1369 aaKnown RBP26.51■■□□□ 1.83
TRIM29-221ENST00000627238 GGT6Q6P531 493 aa26.5■■□□□ 1.83
TRIM29-221ENST00000627238 TCOF1Q13428 1488 aaKnown RBP26.49■■□□□ 1.83
TRIM29-221ENST00000627238 NCOA2Q15596 1464 aa26.49■■□□□ 1.83
TRIM29-221ENST00000627238 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
TRIM29-221ENST00000627238 RSPH4AQ5TD94 716 aa26.47■■□□□ 1.83
TRIM29-221ENST00000627238 CAMSAP2Q08AD1 1489 aa26.47■■□□□ 1.83
TRIM29-221ENST00000627238 PKD2Q13563 968 aa26.45■■□□□ 1.82
TRIM29-221ENST00000627238 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
TRIM29-221ENST00000627238 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
TRIM29-221ENST00000627238 NCKAP5LQ9HCH0 1330 aa26.4■■□□□ 1.82
TRIM29-221ENST00000627238 KDM5DQ9BY66 1539 aa26.4■■□□□ 1.82
TRIM29-221ENST00000627238 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms