RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 CARMIL2Q6F5E8 1435 aa5.94□□□□□ -1.46
SCARNA15.3-201ENST00000626315 MSH5O43196 834 aa5.93□□□□□ -1.46
SCARNA15.3-201ENST00000626315 EHMT2Q96KQ7 1210 aa5.93□□□□□ -1.46
SCARNA15.3-201ENST00000626315 SETD1BQ9UPS6 1966 aaKnown RBP5.92□□□□□ -1.46
SCARNA15.3-201ENST00000626315 CPS1P31327 1500 aa5.92□□□□□ -1.46
SCARNA15.3-201ENST00000626315 ABCA10Q8WWZ4 1543 aa5.92□□□□□ -1.46
SCARNA15.3-201ENST00000626315 TTC37Q6PGP7 1564 aa5.92□□□□□ -1.46
SCARNA15.3-201ENST00000626315 TRAPPC8Q9Y2L5 1435 aa5.91□□□□□ -1.46
SCARNA15.3-201ENST00000626315 CCDC88BA6NC98 1476 aa5.91□□□□□ -1.46
SCARNA15.3-201ENST00000626315 KDM5BQ9UGL1 1544 aa5.91□□□□□ -1.46
SCARNA15.3-201ENST00000626315 CCDC125Q86Z20 511 aa5.91□□□□□ -1.46
SCARNA15.3-201ENST00000626315 ZNF784Q8NCA9 323 aaPredicted RBP5.91□□□□□ -1.46
SCARNA15.3-201ENST00000626315 TOP2AP11388 1531 aaKnown RBP5.9□□□□□ -1.46
SCARNA15.3-201ENST00000626315 CUL7Q14999 1698 aa5.9□□□□□ -1.47
SCARNA15.3-201ENST00000626315 ATAD2Q6PL18 1390 aa5.9□□□□□ -1.47
SCARNA15.3-201ENST00000626315 PRELPP51888 382 aa5.89□□□□□ -1.47
SCARNA15.3-201ENST00000626315 CUX1P39880 1505 aa5.89□□□□□ -1.47
SCARNA15.3-201ENST00000626315 CAMSAP1Q5T5Y3 1602 aa5.88□□□□□ -1.47
SCARNA15.3-201ENST00000626315 CDK12Q9NYV4 1490 aaPredicted RBP5.88□□□□□ -1.47
SCARNA15.3-201ENST00000626315 ABCA5Q8WWZ7 1642 aa5.88□□□□□ -1.47
SCARNA15.3-201ENST00000626315 SHANK2Q9UPX8 1470 aa5.87□□□□□ -1.47
SCARNA15.3-201ENST00000626315 LRRC7Q96NW7 1537 aa5.86□□□□□ -1.47
SCARNA15.3-201ENST00000626315 RBM6P78332 1123 aaKnown RBP5.86□□□□□ -1.47
SCARNA15.3-201ENST00000626315 RUSC2Q8N2Y8 1516 aa5.85□□□□□ -1.47
SCARNA15.3-201ENST00000626315 NEO1Q92859 1461 aa5.85□□□□□ -1.47
SCARNA15.3-201ENST00000626315 NGLY1Q96IV0 654 aa5.85□□□□□ -1.47
SCARNA15.3-201ENST00000626315 FER1L4A9Z1Z3 1794 aa5.85□□□□□ -1.47
SCARNA15.3-201ENST00000626315 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.47
SCARNA15.3-201ENST00000626315 DENND4BO75064 1496 aaPredicted RBP5.84□□□□□ -1.47
SCARNA15.3-201ENST00000626315 JCADQ9P266 1359 aa5.84□□□□□ -1.47
SCARNA15.3-201ENST00000626315 HRCP23327 699 aa5.84□□□□□ -1.47
SCARNA15.3-201ENST00000626315 PSDA5PKW4 1024 aaPredicted RBP5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 GIGYF1O75420 1035 aaPredicted RBP5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 TNS4Q8IZW8 715 aa5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 QTRT2Q9H974 415 aaKnown RBP5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 PLA2R1Q13018 1463 aa5.83□□□□□ -1.48
SCARNA15.3-201ENST00000626315 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
SCARNA15.3-201ENST00000626315 MYT1LQ9UL68 1186 aa5.82□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ERICH3Q5RHP9 1530 aa5.82□□□□□ -1.48
SCARNA15.3-201ENST00000626315 LRP5O75197 1615 aa5.81□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
SCARNA15.3-201ENST00000626315 SPATA31A6Q5VVP1 1343 aa5.81□□□□□ -1.48
SCARNA15.3-201ENST00000626315 FAM9AQ8IZU1 332 aaPredicted RBP5.81□□□□□ -1.48
SCARNA15.3-201ENST00000626315 WRNQ14191 1432 aaPredicted RBP eCLIP5.81□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ZFYVE16Q7Z3T8 1539 aa5.8□□□□□ -1.48
SCARNA15.3-201ENST00000626315 RAPGEF2Q9Y4G8 1499 aa5.8□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ALKQ9UM73 1620 aa5.8□□□□□ -1.48
SCARNA15.3-201ENST00000626315 FHOD3Q2V2M9 1422 aa5.8□□□□□ -1.48
SCARNA15.3-201ENST00000626315 TCOF1Q13428 1488 aaKnown RBP5.79□□□□□ -1.48
SCARNA15.3-201ENST00000626315 MAGI2Q86UL8 1455 aa5.79□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ANKLE2Q86XL3 938 aa5.79□□□□□ -1.48
SCARNA15.3-201ENST00000626315 RGS12O14924 1447 aa5.79□□□□□ -1.48
SCARNA15.3-201ENST00000626315 EFCAB5A4FU69 1503 aa5.79□□□□□ -1.48
SCARNA15.3-201ENST00000626315 AFF2P51816 1311 aa5.78□□□□□ -1.48
SCARNA15.3-201ENST00000626315 ATP10AO60312 1499 aa5.78□□□□□ -1.48
SCARNA15.3-201ENST00000626315 RAPGEF6Q8TEU7 1601 aa5.78□□□□□ -1.48
SCARNA15.3-201ENST00000626315 POTEDQ86YR6 584 aa5.78□□□□□ -1.48
SCARNA15.3-201ENST00000626315 PPP1R1BQ9UD71 204 aaPredicted RBP5.78□□□□□ -1.48
SCARNA15.3-201ENST00000626315 C9orf84Q5VXU9 1444 aa5.77□□□□□ -1.49
SCARNA15.3-201ENST00000626315 DEFB132Q7Z7B7 95 aa5.77□□□□□ -1.49
SCARNA15.3-201ENST00000626315 ARID3CA6NKF2 412 aa5.76□□□□□ -1.49
SCARNA15.3-201ENST00000626315 COL13A1Q5TAT6 717 aaPredicted RBP5.76□□□□□ -1.49
SCARNA15.3-201ENST00000626315 FRMPD1Q5SYB0 1578 aa5.76□□□□□ -1.49
SCARNA15.3-201ENST00000626315 NPATQ14207 1427 aa5.75□□□□□ -1.49
SCARNA15.3-201ENST00000626315 CNTLNQ9NXG0 1405 aa5.74□□□□□ -1.49
SCARNA15.3-201ENST00000626315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.74□□□□□ -1.49
SCARNA15.3-201ENST00000626315 HNRNPUL2Q1KMD3 747 aaKnown RBP5.74□□□□□ -1.49
SCARNA15.3-201ENST00000626315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCARNA15.3-201ENST00000626315 C8orf37Q96NL8 207 aa5.73□□□□□ -1.49
SCARNA15.3-201ENST00000626315 ZMYM3Q14202 1370 aa5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 HSPA6P17066 643 aa5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 R3HDM1Q15032 1099 aaKnown RBP5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 NHSL1Q5SYE7 1610 aa5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 RNF17Q9BXT8 1623 aaKnown RBP5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 BLMP54132 1417 aaPredicted RBP5.72□□□□□ -1.49
SCARNA15.3-201ENST00000626315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCARNA15.3-201ENST00000626315 BAG6P46379 1132 aa5.7□□□□□ -1.5
SCARNA15.3-201ENST00000626315 THEMISQ8N1K5 641 aaPredicted RBP5.7□□□□□ -1.5
SCARNA15.3-201ENST00000626315 WWC3Q9ULE0 1092 aa5.7□□□□□ -1.5
SCARNA15.3-201ENST00000626315 LRP6O75581 1613 aa5.7□□□□□ -1.5
SCARNA15.3-201ENST00000626315 CDK13Q14004 1512 aaKnown RBP5.69□□□□□ -1.5
SCARNA15.3-201ENST00000626315 ZMYM4Q5VZL5 1548 aa5.69□□□□□ -1.5
SCARNA15.3-201ENST00000626315 FGD6Q6ZV73 1430 aa5.69□□□□□ -1.5
SCARNA15.3-201ENST00000626315 TRPC5Q9UL62 973 aaPredicted RBP5.69□□□□□ -1.5
SCARNA15.3-201ENST00000626315 NPHP4O75161 1426 aaPredicted RBP5.68□□□□□ -1.5
SCARNA15.3-201ENST00000626315 SLAIN2Q9P270 581 aa5.68□□□□□ -1.5
SCARNA15.3-201ENST00000626315 C3P01024 1663 aa5.68□□□□□ -1.5
SCARNA15.3-201ENST00000626315 SIGLEC1Q9BZZ2 1709 aa5.68□□□□□ -1.5
SCARNA15.3-201ENST00000626315 NINLQ9Y2I6 1382 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 ABCA8O94911 1581 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 VWDEQ8N2E2 1590 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 SCAPERQ9BY12 1400 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 DISP1Q96F81 1524 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
SCARNA15.3-201ENST00000626315 HECW1Q76N89 1606 aa5.66□□□□□ -1.5
SCARNA15.3-201ENST00000626315 USP21Q9UK80 565 aa5.66□□□□□ -1.5
SCARNA15.3-201ENST00000626315 CEP170BQ9Y4F5 1589 aaPredicted RBP5.66□□□□□ -1.5
SCARNA15.3-201ENST00000626315 ABCA9Q8IUA7 1624 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms