RNA–Protein interactions for RNA: ENST00000625924.1

RUNX2-211, Transcript of runt related transcription factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX2, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-211ENST00000625924 ARHGAP5Q13017 1502 aa40.38■■■■■ 4.05
RUNX2-211ENST00000625924 PREX2Q70Z35 1606 aa40.29■■■■■ 4.04
RUNX2-211ENST00000625924 CDC42BPAQ5VT25 1732 aa40.29■■■■■ 4.04
RUNX2-211ENST00000625924 POGZQ7Z3K3 1410 aa40.29■■■■■ 4.04
RUNX2-211ENST00000625924 ZMYM4Q5VZL5 1548 aa40.28■■■■■ 4.04
RUNX2-211ENST00000625924 ARHGEF40Q8TER5 1519 aa40.25■■■■■ 4.03
RUNX2-211ENST00000625924 YEATS2Q9ULM3 1422 aa40.23■■■■■ 4.03
RUNX2-211ENST00000625924 MTUS2Q5JR59 1369 aa40.21■■■■■ 4.03
RUNX2-211ENST00000625924 ZFYVE16Q7Z3T8 1539 aa40.2■■■■■ 4.03
RUNX2-211ENST00000625924 ARID4BQ4LE39 1312 aaPredicted RBP40.18■■■■■ 4.02
RUNX2-211ENST00000625924 AFAP1Q8N556 730 aa40.18■■■■■ 4.02
RUNX2-211ENST00000625924 MAGI2Q86UL8 1455 aa40.15■■■■■ 4.02
RUNX2-211ENST00000625924 GPATCH8Q9UKJ3 1502 aaKnown RBP40.15■■■■■ 4.02
RUNX2-211ENST00000625924 ARHGEF12Q9NZN5 1544 aa40.13■■■■■ 4.01
RUNX2-211ENST00000625924 SIGLEC1Q9BZZ2 1709 aa40.13■■■■■ 4.01
RUNX2-211ENST00000625924 ZNF518AQ6AHZ1 1483 aa40.12■■■■■ 4.01
RUNX2-211ENST00000625924 VPS8Q8N3P4 1428 aa40.11■■■■■ 4.01
RUNX2-211ENST00000625924 ZNF777Q9ULD5 760 aaPredicted RBP40.11■■■■■ 4.01
RUNX2-211ENST00000625924 BCORL1Q5H9F3 1711 aa40.1■■■■■ 4.01
RUNX2-211ENST00000625924 ADAMTSL3P82987 1691 aa40.1■■■■■ 4.01
RUNX2-211ENST00000625924 ABCC1P33527 1531 aa40.1■■■■■ 4.01
RUNX2-211ENST00000625924 EHBP1L1Q8N3D4 1523 aa40.07■■■■■ 4.01
RUNX2-211ENST00000625924 ITSN2Q9NZM3 1697 aa40.07■■■■■ 4.01
RUNX2-211ENST00000625924 TRAPPC8Q9Y2L5 1435 aa40.07■■■■■ 4.01
RUNX2-211ENST00000625924 KDM5CP41229 1560 aa40.07■■■■■ 4
RUNX2-211ENST00000625924 CCNB3Q8WWL7 1395 aa40.06■■■■■ 4
RUNX2-211ENST00000625924 SAMD9LQ8IVG5 1584 aa40.05■■■■■ 4
RUNX2-211ENST00000625924 CFDP1Q9UEE9 299 aaPredicted RBP40.01■■■■■ 4
RUNX2-211ENST00000625924 TIAM1Q13009 1591 aa40.01■■■■■ 4
RUNX2-211ENST00000625924 MYT1LQ9UL68 1186 aa40■■■■□ 3.99
RUNX2-211ENST00000625924 ATP10AO60312 1499 aa39.99■■■■□ 3.99
RUNX2-211ENST00000625924 MADDQ8WXG6 1647 aa39.99■■■■□ 3.99
RUNX2-211ENST00000625924 HECW2Q9P2P5 1572 aa39.98■■■■□ 3.99
RUNX2-211ENST00000625924 HNRNPMP52272 730 aaKnown RBP eCLIP39.94■■■■□ 3.98
RUNX2-211ENST00000625924 SYCP2Q9BX26 1530 aa39.94■■■■□ 3.98
RUNX2-211ENST00000625924 PTPRMP28827 1452 aa39.93■■■■□ 3.98
RUNX2-211ENST00000625924 MLECQ14165 292 aa39.93■■■■□ 3.98
RUNX2-211ENST00000625924 C9orf84Q5VXU9 1444 aa39.92■■■■□ 3.98
RUNX2-211ENST00000625924 MLH3Q9UHC1 1453 aa39.92■■■■□ 3.98
RUNX2-211ENST00000625924 DIP2CQ9Y2E4 1556 aa39.9■■■■□ 3.98
RUNX2-211ENST00000625924 SUPT6HQ7KZ85 1726 aaKnown RBP39.9■■■■□ 3.98
RUNX2-211ENST00000625924 ABCA6Q8N139 1617 aa39.89■■■■□ 3.98
RUNX2-211ENST00000625924 ZNF644Q9H582 1327 aaPredicted RBP39.89■■■■□ 3.98
RUNX2-211ENST00000625924 NCOA2Q15596 1464 aa39.89■■■■□ 3.98
RUNX2-211ENST00000625924 KIDINS220Q9ULH0 1771 aa39.87■■■■□ 3.97
RUNX2-211ENST00000625924 RIMS1Q86UR5 1692 aaKnown RBP39.87■■■■□ 3.97
RUNX2-211ENST00000625924 LRRC9Q6ZRR7 1453 aa39.85■■■■□ 3.97
RUNX2-211ENST00000625924 KANK4Q5T7N3 995 aaPredicted RBP39.84■■■■□ 3.97
RUNX2-211ENST00000625924 KIAA1107Q9UPP5 1409 aa39.84■■■■□ 3.97
RUNX2-211ENST00000625924 PLEKHH2Q8IVE3 1493 aa39.82■■■■□ 3.96
RUNX2-211ENST00000625924 MAP3K1Q13233 1512 aa39.78■■■■□ 3.96
RUNX2-211ENST00000625924 SPAG9O60271 1321 aaKnown RBP39.77■■■■□ 3.96
RUNX2-211ENST00000625924 FER1L4A9Z1Z3 1794 aa39.76■■■■□ 3.95
RUNX2-211ENST00000625924 REREQ9P2R6 1566 aa39.74■■■■□ 3.95
RUNX2-211ENST00000625924 PLPPR3Q6T4P5 718 aa39.74■■■■□ 3.95
RUNX2-211ENST00000625924 MBD5Q9P267 1494 aa39.71■■■■□ 3.95
RUNX2-211ENST00000625924 ATP7AQ04656 1500 aa39.68■■■■□ 3.94
RUNX2-211ENST00000625924 INO80Q9ULG1 1556 aaPredicted RBP39.66■■■■□ 3.94
RUNX2-211ENST00000625924 CAMSAP2Q08AD1 1489 aa39.65■■■■□ 3.94
RUNX2-211ENST00000625924 AGLP35573 1532 aa39.63■■■■□ 3.93
RUNX2-211ENST00000625924 APLP2Q06481 763 aa39.62■■■■□ 3.93
RUNX2-211ENST00000625924 CEBPAP49715 358 aaPredicted RBP39.54■■■■□ 3.92
RUNX2-211ENST00000625924 A2MP01023 1474 aa39.51■■■■□ 3.92
RUNX2-211ENST00000625924 CCDC141Q6ZP82 1450 aa39.51■■■■□ 3.92
RUNX2-211ENST00000625924 MYOM3Q5VTT5 1437 aa39.5■■■■□ 3.91
RUNX2-211ENST00000625924 PLXNC1O60486 1568 aa39.48■■■■□ 3.91
RUNX2-211ENST00000625924 ADGBQ8N7X0 1667 aa39.47■■■■□ 3.91
RUNX2-211ENST00000625924 RTEL1-TNFRSF6BF6WH68 1400 aa39.47■■■■□ 3.91
RUNX2-211ENST00000625924 LMTK3Q96Q04 1460 aa39.47■■■■□ 3.91
RUNX2-211ENST00000625924 RSPH4AQ5TD94 716 aa39.45■■■■□ 3.91
RUNX2-211ENST00000625924 ARHGEF5Q12774 1597 aa39.45■■■■□ 3.91
RUNX2-211ENST00000625924 MIA2Q96PC5 1412 aa39.42■■■■□ 3.9
RUNX2-211ENST00000625924 ESF1Q9H501 851 aaKnown RBP39.41■■■■□ 3.9
RUNX2-211ENST00000625924 C3P01024 1663 aa39.39■■■■□ 3.9
RUNX2-211ENST00000625924 TSPY4P0CV99 314 aa39.36■■■■□ 3.89
RUNX2-211ENST00000625924 TSPY10P0CW01 314 aa39.36■■■■□ 3.89
RUNX2-211ENST00000625924 GGT6Q6P531 493 aa39.35■■■■□ 3.89
RUNX2-211ENST00000625924 HSPA2P54652 639 aa39.34■■■■□ 3.89
RUNX2-211ENST00000625924 DHX29Q7Z478 1369 aaKnown RBP39.33■■■■□ 3.89
RUNX2-211ENST00000625924 PTPN23Q9H3S7 1636 aa39.28■■■■□ 3.88
RUNX2-211ENST00000625924 CNTLNQ9NXG0 1405 aa39.28■■■■□ 3.88
RUNX2-211ENST00000625924 SETD1BQ9UPS6 1966 aaKnown RBP39.28■■■■□ 3.88
RUNX2-211ENST00000625924 CLTCQ00610 1675 aaKnown RBP39.27■■■■□ 3.88
RUNX2-211ENST00000625924 PREX1Q8TCU6 1659 aa39.27■■■■□ 3.88
RUNX2-211ENST00000625924 MROH2AA6NES4 1674 aa39.24■■■■□ 3.87
RUNX2-211ENST00000625924 MAST1Q9Y2H9 1570 aa39.24■■■■□ 3.87
RUNX2-211ENST00000625924 FGD6Q6ZV73 1430 aa39.23■■■■□ 3.87
RUNX2-211ENST00000625924 KIF3BO15066 747 aa39.23■■■■□ 3.87
RUNX2-211ENST00000625924 ZMYM3Q14202 1370 aa39.22■■■■□ 3.87
RUNX2-211ENST00000625924 ABCC5O15440 1437 aa39.16■■■■□ 3.86
RUNX2-211ENST00000625924 TCOF1Q13428 1488 aaKnown RBP39.15■■■■□ 3.86
RUNX2-211ENST00000625924 UHRF1BP1Q6BDS2 1440 aa39.13■■■■□ 3.86
RUNX2-211ENST00000625924 CROCC2H7BZ55 1655 aa39.13■■■■□ 3.85
RUNX2-211ENST00000625924 PPP6R1Q9UPN7 881 aa39.12■■■■□ 3.85
RUNX2-211ENST00000625924 DAPK1P53355 1430 aa39.08■■■■□ 3.85
RUNX2-211ENST00000625924 DNMT1P26358 1616 aaKnown RBP39.08■■■■□ 3.85
RUNX2-211ENST00000625924 PPARGC1BQ86YN6 1023 aaKnown RBP39.05■■■■□ 3.84
RUNX2-211ENST00000625924 NPATQ14207 1427 aa39.04■■■■□ 3.84
RUNX2-211ENST00000625924 SHANK2Q9UPX8 1470 aa39.04■■■■□ 3.84
RUNX2-211ENST00000625924 PTPRKQ15262 1439 aa39.03■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms