RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS8-227ENST00000625842 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
VPS8-227ENST00000625842 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
VPS8-227ENST00000625842 KCNJ4P48050 445 aa14.29□□□□□ -0.12
VPS8-227ENST00000625842 KRI1Q8N9T8 703 aaKnown RBP14.29□□□□□ -0.12
VPS8-227ENST00000625842 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
VPS8-227ENST00000625842 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
VPS8-227ENST00000625842 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
VPS8-227ENST00000625842 MORC1Q86VD1 984 aa14.28□□□□□ -0.12
VPS8-227ENST00000625842 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
VPS8-227ENST00000625842 PTPRGP23470 1445 aa14.27□□□□□ -0.13
VPS8-227ENST00000625842 FMN1Q68DA7 1419 aa14.27□□□□□ -0.13
VPS8-227ENST00000625842 CLSTN1O94985 981 aa14.26□□□□□ -0.13
VPS8-227ENST00000625842 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
VPS8-227ENST00000625842 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
VPS8-227ENST00000625842 AMPHP49418 695 aa14.25□□□□□ -0.13
VPS8-227ENST00000625842 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS8-227ENST00000625842 CCDC136Q96JN2 1154 aa14.24□□□□□ -0.13
VPS8-227ENST00000625842 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
VPS8-227ENST00000625842 GORABQ5T7V8 394 aa14.23□□□□□ -0.13
VPS8-227ENST00000625842 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
VPS8-227ENST00000625842 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
VPS8-227ENST00000625842 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
VPS8-227ENST00000625842 STK31Q9BXU1 1019 aa14.21□□□□□ -0.14
VPS8-227ENST00000625842 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
VPS8-227ENST00000625842 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
VPS8-227ENST00000625842 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
VPS8-227ENST00000625842 BECN1Q14457 450 aa14.2□□□□□ -0.14
VPS8-227ENST00000625842 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
VPS8-227ENST00000625842 NEUROD2Q15784 382 aa14.19□□□□□ -0.14
VPS8-227ENST00000625842 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
VPS8-227ENST00000625842 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
VPS8-227ENST00000625842 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
VPS8-227ENST00000625842 CTDP1Q9Y5B0 961 aaPredicted RBP14.18□□□□□ -0.14
VPS8-227ENST00000625842 IPO8O15397 1037 aaKnown RBP14.17□□□□□ -0.14
VPS8-227ENST00000625842 NOL10Q9BSC4 688 aaKnown RBP14.16□□□□□ -0.14
VPS8-227ENST00000625842 C1orf141Q5JVX7 400 aa14.16□□□□□ -0.14
VPS8-227ENST00000625842 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
VPS8-227ENST00000625842 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
VPS8-227ENST00000625842 NRDCO43847 1150 aa14.15□□□□□ -0.14
VPS8-227ENST00000625842 TNIKQ9UKE5 1360 aa14.15□□□□□ -0.14
VPS8-227ENST00000625842 PSME1Q06323 249 aa14.15□□□□□ -0.14
VPS8-227ENST00000625842 MCCP23508 829 aa14.14□□□□□ -0.15
VPS8-227ENST00000625842 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
VPS8-227ENST00000625842 AMOTL1Q8IY63 956 aa14.13□□□□□ -0.15
VPS8-227ENST00000625842 CCDC34Q96HJ3 373 aa14.13□□□□□ -0.15
VPS8-227ENST00000625842 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
VPS8-227ENST00000625842 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
VPS8-227ENST00000625842 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
VPS8-227ENST00000625842 GOLGA6L6A8MZA4 724 aa14.12□□□□□ -0.15
VPS8-227ENST00000625842 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
VPS8-227ENST00000625842 NUP155O75694 1391 aa14.12□□□□□ -0.15
VPS8-227ENST00000625842 TTC5Q8N0Z6 440 aa14.12□□□□□ -0.15
VPS8-227ENST00000625842 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
VPS8-227ENST00000625842 PKD2Q13563 968 aa14.11□□□□□ -0.15
VPS8-227ENST00000625842 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
VPS8-227ENST00000625842 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
VPS8-227ENST00000625842 WWC1Q8IX03 1113 aa14.09□□□□□ -0.15
VPS8-227ENST00000625842 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
VPS8-227ENST00000625842 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
VPS8-227ENST00000625842 CHAF1AQ13111 956 aaPredicted RBP14.07□□□□□ -0.16
VPS8-227ENST00000625842 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
VPS8-227ENST00000625842 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
VPS8-227ENST00000625842 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
VPS8-227ENST00000625842 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
VPS8-227ENST00000625842 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
VPS8-227ENST00000625842 WDHD1O75717 1129 aaPredicted RBP14.06□□□□□ -0.16
VPS8-227ENST00000625842 GOLGA6L4A6NEF3 574 aa14.05□□□□□ -0.16
VPS8-227ENST00000625842 TEFQ10587 303 aa14.05□□□□□ -0.16
VPS8-227ENST00000625842 COG3Q96JB2 828 aa14.05□□□□□ -0.16
VPS8-227ENST00000625842 CHMP4CQ96CF2 233 aa14.04□□□□□ -0.16
VPS8-227ENST00000625842 FKBP8Q14318 412 aa14.04□□□□□ -0.16
VPS8-227ENST00000625842 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
VPS8-227ENST00000625842 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
VPS8-227ENST00000625842 STAC3Q96MF2 364 aa14.04□□□□□ -0.16
VPS8-227ENST00000625842 HMMRO75330 724 aa14.03□□□□□ -0.16
VPS8-227ENST00000625842 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
VPS8-227ENST00000625842 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
VPS8-227ENST00000625842 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS8-227ENST00000625842 LTV1Q96GA3 475 aaPredicted RBP14.03□□□□□ -0.16
VPS8-227ENST00000625842 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
VPS8-227ENST00000625842 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
VPS8-227ENST00000625842 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.16
VPS8-227ENST00000625842 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
VPS8-227ENST00000625842 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
VPS8-227ENST00000625842 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
VPS8-227ENST00000625842 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
VPS8-227ENST00000625842 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
VPS8-227ENST00000625842 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
VPS8-227ENST00000625842 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
VPS8-227ENST00000625842 MARCH6O60337 910 aa14□□□□□ -0.17
VPS8-227ENST00000625842 MYO15BQ96JP2 1530 aa13.99□□□□□ -0.17
VPS8-227ENST00000625842 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
VPS8-227ENST00000625842 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
VPS8-227ENST00000625842 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
VPS8-227ENST00000625842 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
VPS8-227ENST00000625842 TRIM44Q96DX7 344 aaPredicted RBP13.98□□□□□ -0.17
VPS8-227ENST00000625842 NUTM2FA1L443 756 aa13.98□□□□□ -0.17
VPS8-227ENST00000625842 PRM3Q9NNZ6 103 aa13.98□□□□□ -0.17
VPS8-227ENST00000625842 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms