RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
NPLOC4-221ENST00000625705 PLB1Q6P1J6 1458 aa11.66□□□□□ -0.54
NPLOC4-221ENST00000625705 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-221ENST00000625705 UHRF1BP1LA0JNW5 1464 aa11.65□□□□□ -0.54
NPLOC4-221ENST00000625705 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-221ENST00000625705 RAPGEF6Q8TEU7 1601 aa11.64□□□□□ -0.55
NPLOC4-221ENST00000625705 ABCA8O94911 1581 aa11.63□□□□□ -0.55
NPLOC4-221ENST00000625705 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
NPLOC4-221ENST00000625705 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
NPLOC4-221ENST00000625705 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
NPLOC4-221ENST00000625705 ATP1B4Q9UN42 357 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-221ENST00000625705 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
NPLOC4-221ENST00000625705 CLIP1P30622 1438 aa11.6□□□□□ -0.55
NPLOC4-221ENST00000625705 KDM5BQ9UGL1 1544 aa11.6□□□□□ -0.55
NPLOC4-221ENST00000625705 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
NPLOC4-221ENST00000625705 ASXL2Q76L83 1435 aa11.6□□□□□ -0.55
NPLOC4-221ENST00000625705 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
NPLOC4-221ENST00000625705 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
NPLOC4-221ENST00000625705 KIF13AQ9H1H9 1805 aa11.57□□□□□ -0.56
NPLOC4-221ENST00000625705 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
NPLOC4-221ENST00000625705 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
NPLOC4-221ENST00000625705 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
NPLOC4-221ENST00000625705 ABCC10Q5T3U5 1492 aa11.56□□□□□ -0.56
NPLOC4-221ENST00000625705 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-221ENST00000625705 WDR7Q9Y4E6 1490 aa11.55□□□□□ -0.56
NPLOC4-221ENST00000625705 PROM2Q8N271 834 aa11.54□□□□□ -0.56
NPLOC4-221ENST00000625705 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-221ENST00000625705 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
NPLOC4-221ENST00000625705 ATP10BO94823 1461 aa11.53□□□□□ -0.56
NPLOC4-221ENST00000625705 PCF11O94913 1555 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-221ENST00000625705 GABBR2O75899 941 aa11.52□□□□□ -0.57
NPLOC4-221ENST00000625705 KCNH8Q96L42 1107 aa11.52□□□□□ -0.57
NPLOC4-221ENST00000625705 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-221ENST00000625705 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-221ENST00000625705 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
NPLOC4-221ENST00000625705 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
NPLOC4-221ENST00000625705 GLI2P10070 1586 aa11.49□□□□□ -0.57
NPLOC4-221ENST00000625705 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-221ENST00000625705 CCDC18Q5T9S5 1454 aa11.48□□□□□ -0.57
NPLOC4-221ENST00000625705 CASKIN1Q8WXD9 1431 aa11.47□□□□□ -0.57
NPLOC4-221ENST00000625705 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.57
NPLOC4-221ENST00000625705 MAP3K4Q9Y6R4 1608 aa11.46□□□□□ -0.57
NPLOC4-221ENST00000625705 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
NPLOC4-221ENST00000625705 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
NPLOC4-221ENST00000625705 CD109Q6YHK3 1445 aa11.43□□□□□ -0.58
NPLOC4-221ENST00000625705 KIF14Q15058 1648 aa11.43□□□□□ -0.58
NPLOC4-221ENST00000625705 KDM6BO15054 1643 aa11.42□□□□□ -0.58
NPLOC4-221ENST00000625705 ABCA9Q8IUA7 1624 aa11.42□□□□□ -0.58
NPLOC4-221ENST00000625705 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
NPLOC4-221ENST00000625705 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-221ENST00000625705 VPS8Q8N3P4 1428 aa11.41□□□□□ -0.58
NPLOC4-221ENST00000625705 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-221ENST00000625705 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-221ENST00000625705 FKBP8Q14318 412 aa11.39□□□□□ -0.59
NPLOC4-221ENST00000625705 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
NPLOC4-221ENST00000625705 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
NPLOC4-221ENST00000625705 MAGI3Q5TCQ9 1506 aa11.38□□□□□ -0.59
NPLOC4-221ENST00000625705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPLOC4-221ENST00000625705 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
NPLOC4-221ENST00000625705 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
NPLOC4-221ENST00000625705 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-221ENST00000625705 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
NPLOC4-221ENST00000625705 FANCAO15360 1455 aa11.34□□□□□ -0.59
NPLOC4-221ENST00000625705 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
NPLOC4-221ENST00000625705 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
NPLOC4-221ENST00000625705 NEO1Q92859 1461 aa11.32□□□□□ -0.6
NPLOC4-221ENST00000625705 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-221ENST00000625705 CLCN6P51797 869 aa11.31□□□□□ -0.6
NPLOC4-221ENST00000625705 MIER1Q8N108 512 aa11.31□□□□□ -0.6
NPLOC4-221ENST00000625705 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
NPLOC4-221ENST00000625705 PHLDB1Q86UU1 1377 aa11.3□□□□□ -0.6
NPLOC4-221ENST00000625705 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-221ENST00000625705 CCNB3Q8WWL7 1395 aa11.29□□□□□ -0.6
NPLOC4-221ENST00000625705 PLCH2O75038 1416 aa11.29□□□□□ -0.6
NPLOC4-221ENST00000625705 EFCAB2Q5VUJ9 269 aa11.29□□□□□ -0.6
NPLOC4-221ENST00000625705 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
NPLOC4-221ENST00000625705 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
NPLOC4-221ENST00000625705 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
NPLOC4-221ENST00000625705 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
NPLOC4-221ENST00000625705 CDC42BPAQ5VT25 1732 aa11.28□□□□□ -0.6
NPLOC4-221ENST00000625705 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
NPLOC4-221ENST00000625705 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
NPLOC4-221ENST00000625705 ZNF777Q9ULD5 760 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-221ENST00000625705 CDC42BPBQ9Y5S2 1711 aa11.26□□□□□ -0.61
NPLOC4-221ENST00000625705 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-221ENST00000625705 LRRC9Q6ZRR7 1453 aa11.26□□□□□ -0.61
NPLOC4-221ENST00000625705 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
NPLOC4-221ENST00000625705 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
NPLOC4-221ENST00000625705 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-221ENST00000625705 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-221ENST00000625705 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
NPLOC4-221ENST00000625705 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
NPLOC4-221ENST00000625705 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
NPLOC4-221ENST00000625705 RAPGEF3O95398 923 aa11.24□□□□□ -0.61
NPLOC4-221ENST00000625705 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
NPLOC4-221ENST00000625705 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-221ENST00000625705 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
NPLOC4-221ENST00000625705 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-221ENST00000625705 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
NPLOC4-221ENST00000625705 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms