RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-222ENST00000625672 STK26Q9P289 416 aa17.63■□□□□ 0.41
NRXN1-222ENST00000625672 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
NRXN1-222ENST00000625672 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
NRXN1-222ENST00000625672 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
NRXN1-222ENST00000625672 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
NRXN1-222ENST00000625672 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
NRXN1-222ENST00000625672 TMF1P82094 1093 aa17.6■□□□□ 0.41
NRXN1-222ENST00000625672 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
NRXN1-222ENST00000625672 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.41
NRXN1-222ENST00000625672 RASSF8Q8NHQ8 419 aa17.57■□□□□ 0.4
NRXN1-222ENST00000625672 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
NRXN1-222ENST00000625672 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
NRXN1-222ENST00000625672 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
NRXN1-222ENST00000625672 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
NRXN1-222ENST00000625672 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
NRXN1-222ENST00000625672 GGT6Q6P531 493 aa17.53■□□□□ 0.4
NRXN1-222ENST00000625672 CREBRFQ8IUR6 639 aa17.53■□□□□ 0.4
NRXN1-222ENST00000625672 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
NRXN1-222ENST00000625672 CEP89Q96ST8 783 aa17.52■□□□□ 0.4
NRXN1-222ENST00000625672 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
NRXN1-222ENST00000625672 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
NRXN1-222ENST00000625672 MARCH6O60337 910 aa17.5■□□□□ 0.39
NRXN1-222ENST00000625672 TPM4P67936 248 aa17.5■□□□□ 0.39
NRXN1-222ENST00000625672 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
NRXN1-222ENST00000625672 CCDC34Q96HJ3 373 aa17.49■□□□□ 0.39
NRXN1-222ENST00000625672 MSH5O43196 834 aa17.48■□□□□ 0.39
NRXN1-222ENST00000625672 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
NRXN1-222ENST00000625672 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
NRXN1-222ENST00000625672 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
NRXN1-222ENST00000625672 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
NRXN1-222ENST00000625672 TOMM22Q9NS69 142 aa17.46■□□□□ 0.39
NRXN1-222ENST00000625672 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
NRXN1-222ENST00000625672 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
NRXN1-222ENST00000625672 WWC1Q8IX03 1113 aa17.46■□□□□ 0.38
NRXN1-222ENST00000625672 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
NRXN1-222ENST00000625672 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
NRXN1-222ENST00000625672 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
NRXN1-222ENST00000625672 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
NRXN1-222ENST00000625672 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
NRXN1-222ENST00000625672 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
NRXN1-222ENST00000625672 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
NRXN1-222ENST00000625672 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
NRXN1-222ENST00000625672 TCEAL9Q9UHQ7 104 aa17.42■□□□□ 0.38
NRXN1-222ENST00000625672 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
NRXN1-222ENST00000625672 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
NRXN1-222ENST00000625672 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
NRXN1-222ENST00000625672 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
NRXN1-222ENST00000625672 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
NRXN1-222ENST00000625672 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
NRXN1-222ENST00000625672 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
NRXN1-222ENST00000625672 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
NRXN1-222ENST00000625672 ARID3AQ99856 593 aa17.38■□□□□ 0.37
NRXN1-222ENST00000625672 RAD21O60216 631 aa17.38■□□□□ 0.37
NRXN1-222ENST00000625672 PES1O00541 588 aaKnown RBP17.37■□□□□ 0.37
NRXN1-222ENST00000625672 GBP4Q96PP9 640 aa17.37■□□□□ 0.37
NRXN1-222ENST00000625672 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
NRXN1-222ENST00000625672 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
NRXN1-222ENST00000625672 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
NRXN1-222ENST00000625672 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
NRXN1-222ENST00000625672 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
NRXN1-222ENST00000625672 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
NRXN1-222ENST00000625672 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
NRXN1-222ENST00000625672 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
NRXN1-222ENST00000625672 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
NRXN1-222ENST00000625672 EVA1CP58658 441 aa17.35■□□□□ 0.37
NRXN1-222ENST00000625672 PTMSP20962 102 aa17.34■□□□□ 0.37
NRXN1-222ENST00000625672 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
NRXN1-222ENST00000625672 AMPHP49418 695 aa17.33■□□□□ 0.37
NRXN1-222ENST00000625672 TPM3P06753 285 aa17.33■□□□□ 0.36
NRXN1-222ENST00000625672 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
NRXN1-222ENST00000625672 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
NRXN1-222ENST00000625672 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
NRXN1-222ENST00000625672 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
NRXN1-222ENST00000625672 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
NRXN1-222ENST00000625672 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
NRXN1-222ENST00000625672 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
NRXN1-222ENST00000625672 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
NRXN1-222ENST00000625672 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
NRXN1-222ENST00000625672 HMMRO75330 724 aa17.3■□□□□ 0.36
NRXN1-222ENST00000625672 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
NRXN1-222ENST00000625672 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
NRXN1-222ENST00000625672 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
NRXN1-222ENST00000625672 NUTM2FA1L443 756 aa17.29■□□□□ 0.36
NRXN1-222ENST00000625672 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
NRXN1-222ENST00000625672 TNNT3P45378 269 aaPredicted RBP17.29■□□□□ 0.36
NRXN1-222ENST00000625672 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
NRXN1-222ENST00000625672 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
NRXN1-222ENST00000625672 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.36
NRXN1-222ENST00000625672 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
NRXN1-222ENST00000625672 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
NRXN1-222ENST00000625672 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
NRXN1-222ENST00000625672 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
NRXN1-222ENST00000625672 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
NRXN1-222ENST00000625672 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
NRXN1-222ENST00000625672 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
NRXN1-222ENST00000625672 TPM2P07951 284 aa17.24■□□□□ 0.35
NRXN1-222ENST00000625672 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
NRXN1-222ENST00000625672 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
NRXN1-222ENST00000625672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
NRXN1-222ENST00000625672 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms