RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
DDX41-218ENST00000625286 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
DDX41-218ENST00000625286 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
DDX41-218ENST00000625286 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
DDX41-218ENST00000625286 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
DDX41-218ENST00000625286 MLECQ14165 292 aa18.39■□□□□ 0.53
DDX41-218ENST00000625286 KIF14Q15058 1648 aa18.38■□□□□ 0.53
DDX41-218ENST00000625286 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
DDX41-218ENST00000625286 LRRIQ1Q96JM4 1722 aa18.37■□□□□ 0.53
DDX41-218ENST00000625286 EFCAB2Q5VUJ9 269 aa18.35■□□□□ 0.53
DDX41-218ENST00000625286 ATP10AO60312 1499 aa18.33■□□□□ 0.53
DDX41-218ENST00000625286 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
DDX41-218ENST00000625286 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
DDX41-218ENST00000625286 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
DDX41-218ENST00000625286 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
DDX41-218ENST00000625286 ARHGEF12Q9NZN5 1544 aa18.31■□□□□ 0.52
DDX41-218ENST00000625286 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
DDX41-218ENST00000625286 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
DDX41-218ENST00000625286 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
DDX41-218ENST00000625286 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
DDX41-218ENST00000625286 KDM5CP41229 1560 aa18.26■□□□□ 0.51
DDX41-218ENST00000625286 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
DDX41-218ENST00000625286 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
DDX41-218ENST00000625286 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
DDX41-218ENST00000625286 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
DDX41-218ENST00000625286 CLIP1P30622 1438 aa18.22■□□□□ 0.51
DDX41-218ENST00000625286 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
DDX41-218ENST00000625286 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
DDX41-218ENST00000625286 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
DDX41-218ENST00000625286 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
DDX41-218ENST00000625286 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
DDX41-218ENST00000625286 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
DDX41-218ENST00000625286 PREX2Q70Z35 1606 aa18.17■□□□□ 0.5
DDX41-218ENST00000625286 ABCC1P33527 1531 aa18.17■□□□□ 0.5
DDX41-218ENST00000625286 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
DDX41-218ENST00000625286 SETD1BQ9UPS6 1966 aaKnown RBP18.16■□□□□ 0.5
DDX41-218ENST00000625286 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
DDX41-218ENST00000625286 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
DDX41-218ENST00000625286 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
DDX41-218ENST00000625286 KIDINS220Q9ULH0 1771 aa18.14■□□□□ 0.5
DDX41-218ENST00000625286 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
DDX41-218ENST00000625286 AGLP35573 1532 aa18.13■□□□□ 0.49
DDX41-218ENST00000625286 C3P01024 1663 aa18.12■□□□□ 0.49
DDX41-218ENST00000625286 GPATCH8Q9UKJ3 1502 aaKnown RBP18.09■□□□□ 0.49
DDX41-218ENST00000625286 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
DDX41-218ENST00000625286 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
DDX41-218ENST00000625286 FYCO1Q9BQS8 1478 aa18.08■□□□□ 0.49
DDX41-218ENST00000625286 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
DDX41-218ENST00000625286 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.48
DDX41-218ENST00000625286 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
DDX41-218ENST00000625286 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
DDX41-218ENST00000625286 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
DDX41-218ENST00000625286 PTPRTO14522 1441 aa18■□□□□ 0.47
DDX41-218ENST00000625286 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
DDX41-218ENST00000625286 ZMYM3Q14202 1370 aa18■□□□□ 0.47
DDX41-218ENST00000625286 SUPT6HQ7KZ85 1726 aaKnown RBP18■□□□□ 0.47
DDX41-218ENST00000625286 ZNF644Q9H582 1327 aaPredicted RBP17.99■□□□□ 0.47
DDX41-218ENST00000625286 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
DDX41-218ENST00000625286 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
DDX41-218ENST00000625286 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
DDX41-218ENST00000625286 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
DDX41-218ENST00000625286 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
DDX41-218ENST00000625286 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
DDX41-218ENST00000625286 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
DDX41-218ENST00000625286 PLXNC1O60486 1568 aa17.96■□□□□ 0.46
DDX41-218ENST00000625286 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.46
DDX41-218ENST00000625286 MROH2AA6NES4 1674 aa17.95■□□□□ 0.46
DDX41-218ENST00000625286 NPATQ14207 1427 aa17.94■□□□□ 0.46
DDX41-218ENST00000625286 A2MP01023 1474 aa17.94■□□□□ 0.46
DDX41-218ENST00000625286 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
DDX41-218ENST00000625286 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
DDX41-218ENST00000625286 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
DDX41-218ENST00000625286 GGT6Q6P531 493 aa17.92■□□□□ 0.46
DDX41-218ENST00000625286 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
DDX41-218ENST00000625286 MBD5Q9P267 1494 aa17.92■□□□□ 0.46
DDX41-218ENST00000625286 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
DDX41-218ENST00000625286 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
DDX41-218ENST00000625286 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
DDX41-218ENST00000625286 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
DDX41-218ENST00000625286 ZNF335Q9H4Z2 1342 aaPredicted RBP17.86■□□□□ 0.45
DDX41-218ENST00000625286 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
DDX41-218ENST00000625286 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
DDX41-218ENST00000625286 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
DDX41-218ENST00000625286 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
DDX41-218ENST00000625286 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
DDX41-218ENST00000625286 DHX29Q7Z478 1369 aaKnown RBP17.83■□□□□ 0.45
DDX41-218ENST00000625286 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.45
DDX41-218ENST00000625286 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
DDX41-218ENST00000625286 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.44
DDX41-218ENST00000625286 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
DDX41-218ENST00000625286 RTEL1-TNFRSF6BF6WH68 1400 aa17.82■□□□□ 0.44
DDX41-218ENST00000625286 FBXO31Q5XUX0 539 aaPredicted RBP17.82■□□□□ 0.44
DDX41-218ENST00000625286 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
DDX41-218ENST00000625286 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
DDX41-218ENST00000625286 PKD2Q13563 968 aa17.8■□□□□ 0.44
DDX41-218ENST00000625286 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
DDX41-218ENST00000625286 KIF3BO15066 747 aa17.78■□□□□ 0.44
DDX41-218ENST00000625286 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
DDX41-218ENST00000625286 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
DDX41-218ENST00000625286 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms