RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
ATRX-219ENST00000625063 NLRP6P59044 892 aa11.89□□□□□ -0.51
ATRX-219ENST00000625063 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
ATRX-219ENST00000625063 G3V3G9 751 aa11.88□□□□□ -0.51
ATRX-219ENST00000625063 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
ATRX-219ENST00000625063 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
ATRX-219ENST00000625063 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
ATRX-219ENST00000625063 ST18O60284 1047 aa11.8□□□□□ -0.52
ATRX-219ENST00000625063 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
ATRX-219ENST00000625063 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
ATRX-219ENST00000625063 CUX2O14529 1486 aa11.77□□□□□ -0.52
ATRX-219ENST00000625063 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
ATRX-219ENST00000625063 PPP1R37O75864 691 aa11.76□□□□□ -0.53
ATRX-219ENST00000625063 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
ATRX-219ENST00000625063 SNPHO15079 494 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 ERCC6Q03468 1493 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
ATRX-219ENST00000625063 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
ATRX-219ENST00000625063 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
ATRX-219ENST00000625063 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
ATRX-219ENST00000625063 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
ATRX-219ENST00000625063 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
ATRX-219ENST00000625063 KIF3CO14782 793 aa11.58□□□□□ -0.56
ATRX-219ENST00000625063 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
ATRX-219ENST00000625063 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
ATRX-219ENST00000625063 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
ATRX-219ENST00000625063 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
ATRX-219ENST00000625063 EMP3P54852 163 aa11.51□□□□□ -0.57
ATRX-219ENST00000625063 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
ATRX-219ENST00000625063 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
ATRX-219ENST00000625063 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
ATRX-219ENST00000625063 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATRX-219ENST00000625063 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
ATRX-219ENST00000625063 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
ATRX-219ENST00000625063 DSG2Q14126 1118 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 NESP48681 1621 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
ATRX-219ENST00000625063 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 FOXK1P85037 733 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
ATRX-219ENST00000625063 ERBB3P21860 1342 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 KRTAP3-2Q9BYR7 98 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 SLC34A2O95436 690 aa11.37□□□□□ -0.59
ATRX-219ENST00000625063 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
ATRX-219ENST00000625063 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
ATRX-219ENST00000625063 NUDT7P0C024 238 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 ATAD2BQ9ULI0 1458 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 PDE4AP27815 886 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
ATRX-219ENST00000625063 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
ATRX-219ENST00000625063 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
ATRX-219ENST00000625063 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
ATRX-219ENST00000625063 MFSD10Q14728 455 aa11.28□□□□□ -0.6
ATRX-219ENST00000625063 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
ATRX-219ENST00000625063 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
ATRX-219ENST00000625063 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
ATRX-219ENST00000625063 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
ATRX-219ENST00000625063 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
ATRX-219ENST00000625063 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
ATRX-219ENST00000625063 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
ATRX-219ENST00000625063 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
ATRX-219ENST00000625063 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
ATRX-219ENST00000625063 TBC1D12O60347 775 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
ATRX-219ENST00000625063 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
ATRX-219ENST00000625063 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
ATRX-219ENST00000625063 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
ATRX-219ENST00000625063 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
ATRX-219ENST00000625063 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
ATRX-219ENST00000625063 EVI5O60447 810 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
ATRX-219ENST00000625063 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
ATRX-219ENST00000625063 WDR62O43379 1518 aa11.09□□□□□ -0.63
ATRX-219ENST00000625063 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
ATRX-219ENST00000625063 DPYSL4O14531 572 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms