RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 LRRIQ1Q96JM4 1722 aa29.74■■■□□ 2.35
PCDHB5-202ENST00000623915 MYO5CQ9NQX4 1742 aa29.74■■■□□ 2.35
PCDHB5-202ENST00000623915 PCF11O94913 1555 aaKnown RBP29.74■■■□□ 2.35
PCDHB5-202ENST00000623915 SCAPERQ9BY12 1400 aa29.74■■■□□ 2.35
PCDHB5-202ENST00000623915 CLIP1P30622 1438 aa29.73■■■□□ 2.35
PCDHB5-202ENST00000623915 LMTK3Q96Q04 1460 aa29.73■■■□□ 2.35
PCDHB5-202ENST00000623915 ATP1B4Q9UN42 357 aaPredicted RBP29.69■■■□□ 2.34
PCDHB5-202ENST00000623915 TROQ12816 1431 aaPredicted RBP29.69■■■□□ 2.34
PCDHB5-202ENST00000623915 CDK11AQ9UQ88 783 aaPredicted RBP29.64■■■□□ 2.34
PCDHB5-202ENST00000623915 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
PCDHB5-202ENST00000623915 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
PCDHB5-202ENST00000623915 CASKIN1Q8WXD9 1431 aa29.62■■■□□ 2.33
PCDHB5-202ENST00000623915 FER1L4A9Z1Z3 1794 aa29.6■■■□□ 2.33
PCDHB5-202ENST00000623915 ATP10AO60312 1499 aa29.6■■■□□ 2.33
PCDHB5-202ENST00000623915 ARHGAP5Q13017 1502 aa29.59■■■□□ 2.33
PCDHB5-202ENST00000623915 KDM5CP41229 1560 aa29.59■■■□□ 2.33
PCDHB5-202ENST00000623915 C9orf84Q5VXU9 1444 aa29.58■■■□□ 2.33
PCDHB5-202ENST00000623915 ARHGEF12Q9NZN5 1544 aa29.57■■■□□ 2.32
PCDHB5-202ENST00000623915 ZNF518AQ6AHZ1 1483 aa29.57■■■□□ 2.32
PCDHB5-202ENST00000623915 FYCO1Q9BQS8 1478 aa29.56■■■□□ 2.32
PCDHB5-202ENST00000623915 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
PCDHB5-202ENST00000623915 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
PCDHB5-202ENST00000623915 MLECQ14165 292 aa29.53■■■□□ 2.32
PCDHB5-202ENST00000623915 CCDC18Q5T9S5 1454 aa29.52■■■□□ 2.32
PCDHB5-202ENST00000623915 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
PCDHB5-202ENST00000623915 DIP2CQ9Y2E4 1556 aa29.49■■■□□ 2.31
PCDHB5-202ENST00000623915 AFAP1Q8N556 730 aa29.49■■■□□ 2.31
PCDHB5-202ENST00000623915 HSPA2P54652 639 aa29.48■■■□□ 2.31
PCDHB5-202ENST00000623915 PLPPR3Q6T4P5 718 aa29.48■■■□□ 2.31
PCDHB5-202ENST00000623915 ABCC1P33527 1531 aa29.47■■■□□ 2.31
PCDHB5-202ENST00000623915 FBXO41Q8TF61 875 aa29.46■■■□□ 2.31
PCDHB5-202ENST00000623915 REREQ9P2R6 1566 aa29.45■■■□□ 2.31
PCDHB5-202ENST00000623915 ABCA6Q8N139 1617 aa29.45■■■□□ 2.3
PCDHB5-202ENST00000623915 ITSN2Q9NZM3 1697 aa29.43■■■□□ 2.3
PCDHB5-202ENST00000623915 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
PCDHB5-202ENST00000623915 CDC42BPAQ5VT25 1732 aa29.42■■■□□ 2.3
PCDHB5-202ENST00000623915 TRAPPC8Q9Y2L5 1435 aa29.41■■■□□ 2.3
PCDHB5-202ENST00000623915 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
PCDHB5-202ENST00000623915 AGLP35573 1532 aa29.34■■■□□ 2.29
PCDHB5-202ENST00000623915 KIDINS220Q9ULH0 1771 aa29.34■■■□□ 2.29
PCDHB5-202ENST00000623915 CEBPAP49715 358 aaPredicted RBP29.33■■■□□ 2.29
PCDHB5-202ENST00000623915 VPS8Q8N3P4 1428 aa29.32■■■□□ 2.28
PCDHB5-202ENST00000623915 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
PCDHB5-202ENST00000623915 MYT1LQ9UL68 1186 aa29.28■■■□□ 2.28
PCDHB5-202ENST00000623915 GPATCH8Q9UKJ3 1502 aaKnown RBP29.27■■■□□ 2.28
PCDHB5-202ENST00000623915 C3P01024 1663 aa29.26■■■□□ 2.27
PCDHB5-202ENST00000623915 SYCP2Q9BX26 1530 aa29.25■■■□□ 2.27
PCDHB5-202ENST00000623915 MAP3K1Q13233 1512 aa29.23■■■□□ 2.27
PCDHB5-202ENST00000623915 STRCQ7RTU9 1775 aa29.21■■■□□ 2.27
PCDHB5-202ENST00000623915 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
PCDHB5-202ENST00000623915 UHRF1BP1Q6BDS2 1440 aa29.2■■■□□ 2.27
PCDHB5-202ENST00000623915 ZNF777Q9ULD5 760 aaPredicted RBP29.16■■■□□ 2.26
PCDHB5-202ENST00000623915 TIAM1Q13009 1591 aa29.15■■■□□ 2.26
PCDHB5-202ENST00000623915 INO80Q9ULG1 1556 aaPredicted RBP29.15■■■□□ 2.26
PCDHB5-202ENST00000623915 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
PCDHB5-202ENST00000623915 EHBP1L1Q8N3D4 1523 aa29.14■■■□□ 2.25
PCDHB5-202ENST00000623915 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
PCDHB5-202ENST00000623915 ATP7AQ04656 1500 aa29.13■■■□□ 2.25
PCDHB5-202ENST00000623915 CNTLNQ9NXG0 1405 aa29.12■■■□□ 2.25
PCDHB5-202ENST00000623915 PLXNC1O60486 1568 aa29.12■■■□□ 2.25
PCDHB5-202ENST00000623915 PLEKHH2Q8IVE3 1493 aa29.11■■■□□ 2.25
PCDHB5-202ENST00000623915 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
PCDHB5-202ENST00000623915 SPAG9O60271 1321 aaKnown RBP29.11■■■□□ 2.25
PCDHB5-202ENST00000623915 CCNB3Q8WWL7 1395 aa29.1■■■□□ 2.25
PCDHB5-202ENST00000623915 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
PCDHB5-202ENST00000623915 MTUS2Q5JR59 1369 aa29.09■■■□□ 2.25
PCDHB5-202ENST00000623915 CFDP1Q9UEE9 299 aaPredicted RBP29.08■■■□□ 2.25
PCDHB5-202ENST00000623915 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
PCDHB5-202ENST00000623915 ESF1Q9H501 851 aaKnown RBP29.06■■■□□ 2.24
PCDHB5-202ENST00000623915 A2MP01023 1474 aa29.03■■■□□ 2.24
PCDHB5-202ENST00000623915 DMRT2Q9Y5R5 561 aa29.02■■■□□ 2.24
PCDHB5-202ENST00000623915 NPATQ14207 1427 aa29.02■■■□□ 2.24
PCDHB5-202ENST00000623915 PTPRTO14522 1441 aa29.01■■■□□ 2.23
PCDHB5-202ENST00000623915 LRRC9Q6ZRR7 1453 aa29■■■□□ 2.23
PCDHB5-202ENST00000623915 MBD5Q9P267 1494 aa29■■■□□ 2.23
PCDHB5-202ENST00000623915 CLTCQ00610 1675 aaKnown RBP28.99■■■□□ 2.23
PCDHB5-202ENST00000623915 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
PCDHB5-202ENST00000623915 NCOA1Q15788 1441 aa28.98■■■□□ 2.23
PCDHB5-202ENST00000623915 ZMYM3Q14202 1370 aa28.98■■■□□ 2.23
PCDHB5-202ENST00000623915 ADGBQ8N7X0 1667 aa28.96■■■□□ 2.23
PCDHB5-202ENST00000623915 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
PCDHB5-202ENST00000623915 LTBP4Q8N2S1 1624 aa28.91■■■□□ 2.22
PCDHB5-202ENST00000623915 MYO3AQ8NEV4 1616 aa28.91■■■□□ 2.22
PCDHB5-202ENST00000623915 ZNF142P52746 1687 aaPredicted RBP28.9■■■□□ 2.22
PCDHB5-202ENST00000623915 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
PCDHB5-202ENST00000623915 PTPRKQ15262 1439 aa28.89■■■□□ 2.22
PCDHB5-202ENST00000623915 RTEL1-TNFRSF6BF6WH68 1400 aa28.88■■■□□ 2.21
PCDHB5-202ENST00000623915 GGT6Q6P531 493 aa28.85■■■□□ 2.21
PCDHB5-202ENST00000623915 CAMSAP2Q08AD1 1489 aa28.84■■■□□ 2.21
PCDHB5-202ENST00000623915 CEP170BQ9Y4F5 1589 aaPredicted RBP28.84■■■□□ 2.21
PCDHB5-202ENST00000623915 CCDC141Q6ZP82 1450 aa28.82■■■□□ 2.2
PCDHB5-202ENST00000623915 DHX29Q7Z478 1369 aaKnown RBP28.81■■■□□ 2.2
PCDHB5-202ENST00000623915 KANK4Q5T7N3 995 aaPredicted RBP28.81■■■□□ 2.2
PCDHB5-202ENST00000623915 PLA2R1Q13018 1463 aa28.8■■■□□ 2.2
PCDHB5-202ENST00000623915 APLP2Q06481 763 aa28.8■■■□□ 2.2
PCDHB5-202ENST00000623915 PPP6R1Q9UPN7 881 aa28.8■■■□□ 2.2
PCDHB5-202ENST00000623915 TCOF1Q13428 1488 aaKnown RBP28.78■■■□□ 2.2
PCDHB5-202ENST00000623915 IQSEC2Q5JU85 1478 aa28.76■■■□□ 2.19
PCDHB5-202ENST00000623915 NCKAP5LQ9HCH0 1330 aa28.75■■■□□ 2.19
PCDHB5-202ENST00000623915 MIA2Q96PC5 1412 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms