RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
ATRX-211ENST00000623321 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
ATRX-211ENST00000623321 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
ATRX-211ENST00000623321 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
ATRX-211ENST00000623321 CDC42BPBQ9Y5S2 1711 aa22.33■■□□□ 1.17
ATRX-211ENST00000623321 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
ATRX-211ENST00000623321 MYO5CQ9NQX4 1742 aa22.32■■□□□ 1.16
ATRX-211ENST00000623321 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
ATRX-211ENST00000623321 PLCH2O75038 1416 aa22.3■■□□□ 1.16
ATRX-211ENST00000623321 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
ATRX-211ENST00000623321 DNMT1P26358 1616 aaKnown RBP22.3■■□□□ 1.16
ATRX-211ENST00000623321 DAPK1P53355 1430 aa22.3■■□□□ 1.16
ATRX-211ENST00000623321 ABCC5O15440 1437 aa22.29■■□□□ 1.16
ATRX-211ENST00000623321 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
ATRX-211ENST00000623321 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
ATRX-211ENST00000623321 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
ATRX-211ENST00000623321 MAPKBP1O60336 1514 aa22.25■■□□□ 1.15
ATRX-211ENST00000623321 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
ATRX-211ENST00000623321 SAMD9LQ8IVG5 1584 aa22.24■■□□□ 1.15
ATRX-211ENST00000623321 EFCAB2Q5VUJ9 269 aa22.24■■□□□ 1.15
ATRX-211ENST00000623321 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
ATRX-211ENST00000623321 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
ATRX-211ENST00000623321 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
ATRX-211ENST00000623321 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
ATRX-211ENST00000623321 ROCK1Q13464 1354 aa22.21■■□□□ 1.15
ATRX-211ENST00000623321 PLEKHH2Q8IVE3 1493 aa22.21■■□□□ 1.15
ATRX-211ENST00000623321 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
ATRX-211ENST00000623321 HNRNPMP52272 730 aaKnown RBP eCLIP22.21■■□□□ 1.151e-7■■■■■ 32.5
ATRX-211ENST00000623321 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
ATRX-211ENST00000623321 NAIPQ13075 1403 aa22.21■■□□□ 1.15
ATRX-211ENST00000623321 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
ATRX-211ENST00000623321 ARHGEF5Q12774 1597 aa22.2■■□□□ 1.14
ATRX-211ENST00000623321 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
ATRX-211ENST00000623321 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
ATRX-211ENST00000623321 CROCC2H7BZ55 1655 aa22.18■■□□□ 1.14
ATRX-211ENST00000623321 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
ATRX-211ENST00000623321 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
ATRX-211ENST00000623321 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
ATRX-211ENST00000623321 SYCP2Q9BX26 1530 aa22.15■■□□□ 1.14
ATRX-211ENST00000623321 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
ATRX-211ENST00000623321 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.14
ATRX-211ENST00000623321 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.13
ATRX-211ENST00000623321 ADGRL2O95490 1459 aa22.14■■□□□ 1.13
ATRX-211ENST00000623321 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
ATRX-211ENST00000623321 FANCAO15360 1455 aa22.13■■□□□ 1.13
ATRX-211ENST00000623321 ADGBQ8N7X0 1667 aa22.12■■□□□ 1.13
ATRX-211ENST00000623321 NCOA1Q15788 1441 aa22.12■■□□□ 1.13
ATRX-211ENST00000623321 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
ATRX-211ENST00000623321 ABCC1P33527 1531 aa22.12■■□□□ 1.13
ATRX-211ENST00000623321 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
ATRX-211ENST00000623321 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
ATRX-211ENST00000623321 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
ATRX-211ENST00000623321 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
ATRX-211ENST00000623321 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
ATRX-211ENST00000623321 GLI2P10070 1586 aa22.09■■□□□ 1.13
ATRX-211ENST00000623321 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
ATRX-211ENST00000623321 MAST1Q9Y2H9 1570 aa22.05■■□□□ 1.12
ATRX-211ENST00000623321 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
ATRX-211ENST00000623321 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
ATRX-211ENST00000623321 ADGRL1O94910 1474 aa22.03■■□□□ 1.12
ATRX-211ENST00000623321 MAP3K4Q9Y6R4 1608 aa22.03■■□□□ 1.12
ATRX-211ENST00000623321 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
ATRX-211ENST00000623321 DIP2BQ9P265 1576 aa22.02■■□□□ 1.12
ATRX-211ENST00000623321 KDM6BO15054 1643 aa22.02■■□□□ 1.12
ATRX-211ENST00000623321 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
ATRX-211ENST00000623321 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
ATRX-211ENST00000623321 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
ATRX-211ENST00000623321 NEO1Q92859 1461 aa21.98■■□□□ 1.11
ATRX-211ENST00000623321 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
ATRX-211ENST00000623321 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
ATRX-211ENST00000623321 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
ATRX-211ENST00000623321 RTEL1-TNFRSF6BF6WH68 1400 aa21.96■■□□□ 1.11
ATRX-211ENST00000623321 PLXNC1O60486 1568 aa21.95■■□□□ 1.1
ATRX-211ENST00000623321 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
ATRX-211ENST00000623321 ZFYVE16Q7Z3T8 1539 aa21.89■■□□□ 1.1
ATRX-211ENST00000623321 DUOX2Q9NRD8 1548 aa21.89■■□□□ 1.09
ATRX-211ENST00000623321 POGZQ7Z3K3 1410 aa21.88■■□□□ 1.09
ATRX-211ENST00000623321 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
ATRX-211ENST00000623321 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
ATRX-211ENST00000623321 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
ATRX-211ENST00000623321 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
ATRX-211ENST00000623321 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
ATRX-211ENST00000623321 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
ATRX-211ENST00000623321 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
ATRX-211ENST00000623321 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
ATRX-211ENST00000623321 KDM5CP41229 1560 aa21.84■■□□□ 1.09
ATRX-211ENST00000623321 ERBINQ96RT1 1412 aa21.84■■□□□ 1.09
ATRX-211ENST00000623321 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
ATRX-211ENST00000623321 TSPOAP1O95153 1857 aa21.83■■□□□ 1.09
ATRX-211ENST00000623321 MLH3Q9UHC1 1453 aa21.82■■□□□ 1.08
ATRX-211ENST00000623321 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
ATRX-211ENST00000623321 RAPGEF3O95398 923 aa21.81■■□□□ 1.08
ATRX-211ENST00000623321 MIER1Q8N108 512 aa21.81■■□□□ 1.08
ATRX-211ENST00000623321 KIDINS220Q9ULH0 1771 aa21.8■■□□□ 1.08
ATRX-211ENST00000623321 NUP155O75694 1391 aa21.8■■□□□ 1.08
ATRX-211ENST00000623321 PZPP20742 1482 aa21.8■■□□□ 1.08
ATRX-211ENST00000623321 KDM5DQ9BY66 1539 aa21.79■■□□□ 1.08
ATRX-211ENST00000623321 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
ATRX-211ENST00000623321 RICTORQ6R327 1708 aa21.77■■□□□ 1.08
ATRX-211ENST00000623321 HECW2Q9P2P5 1572 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms