RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 UBE2Q2Q8WVN8 375 aa8.05□□□□□ -1.12
ERCC6-209ENST00000623073 NUDCQ9Y266 331 aa8.05□□□□□ -1.12
ERCC6-209ENST00000623073 CALD1Q05682 793 aaKnown RBP8.05□□□□□ -1.12
ERCC6-209ENST00000623073 KIF3AQ9Y496 699 aa8.04□□□□□ -1.12
ERCC6-209ENST00000623073 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
ERCC6-209ENST00000623073 CENPQQ7L2Z9 268 aaPredicted RBP8.04□□□□□ -1.12
ERCC6-209ENST00000623073 KIF16BQ96L93 1317 aa8.03□□□□□ -1.12
ERCC6-209ENST00000623073 USP8P40818 1118 aa8.03□□□□□ -1.12
ERCC6-209ENST00000623073 ARGLU1Q9NWB6 273 aaPredicted RBP8.03□□□□□ -1.12
ERCC6-209ENST00000623073 RTN4Q9NQC3 1192 aaKnown RBP8.03□□□□□ -1.12
ERCC6-209ENST00000623073 CGNL1Q0VF96 1302 aa8.02□□□□□ -1.13
ERCC6-209ENST00000623073 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
ERCC6-209ENST00000623073 TSPY4P0CV99 314 aa8.02□□□□□ -1.13
ERCC6-209ENST00000623073 TSPY10P0CW01 314 aa8.02□□□□□ -1.13
ERCC6-209ENST00000623073 SETD5Q9C0A6 1442 aa8.02□□□□□ -1.13
ERCC6-209ENST00000623073 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
ERCC6-209ENST00000623073 KIF27Q86VH2 1401 aa8□□□□□ -1.13
ERCC6-209ENST00000623073 PODXL2Q9NZ53 605 aa8□□□□□ -1.13
ERCC6-209ENST00000623073 RCAN3Q9UKA8 241 aa8□□□□□ -1.13
ERCC6-209ENST00000623073 ARXQ96QS3 562 aa8□□□□□ -1.13
ERCC6-209ENST00000623073 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
ERCC6-209ENST00000623073 CCDC70Q6NSX1 233 aa7.99□□□□□ -1.13
ERCC6-209ENST00000623073 BAZ1BQ9UIG0 1483 aaKnown RBP7.99□□□□□ -1.13
ERCC6-209ENST00000623073 ST18O60284 1047 aa7.98□□□□□ -1.13
ERCC6-209ENST00000623073 CDR1P51861 262 aa7.98□□□□□ -1.13
ERCC6-209ENST00000623073 B4GALNT3Q6L9W6 998 aa7.98□□□□□ -1.13
ERCC6-209ENST00000623073 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
ERCC6-209ENST00000623073 CCP110O43303 1012 aa7.98□□□□□ -1.13
ERCC6-209ENST00000623073 NINLQ9Y2I6 1382 aa7.98□□□□□ -1.13
ERCC6-209ENST00000623073 NLRP13Q86W25 1043 aa7.97□□□□□ -1.13
ERCC6-209ENST00000623073 CHMP5Q9NZZ3 219 aa7.97□□□□□ -1.13
ERCC6-209ENST00000623073 ANKRD30AQ9BXX3 1397 aa7.97□□□□□ -1.13
ERCC6-209ENST00000623073 CCDC39Q9UFE4 941 aa7.97□□□□□ -1.13
ERCC6-209ENST00000623073 DRC7Q8IY82 874 aa7.97□□□□□ -1.13
ERCC6-209ENST00000623073 NUCB2P80303 420 aa7.96□□□□□ -1.13
ERCC6-209ENST00000623073 MBD3O95983 291 aa7.96□□□□□ -1.13
ERCC6-209ENST00000623073 APPP05067 770 aa7.96□□□□□ -1.14
ERCC6-209ENST00000623073 MCM5P33992 734 aa7.96□□□□□ -1.14
ERCC6-209ENST00000623073 ERCC4Q92889 916 aaPredicted RBP7.96□□□□□ -1.14
ERCC6-209ENST00000623073 RGS3P49796 1198 aa7.95□□□□□ -1.14
ERCC6-209ENST00000623073 LETM1O95202 739 aaPredicted RBP7.95□□□□□ -1.14
ERCC6-209ENST00000623073 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
ERCC6-209ENST00000623073 ZNF771Q7L3S4 317 aaPredicted RBP7.95□□□□□ -1.14
ERCC6-209ENST00000623073 CCDC173Q0VFZ6 552 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 FAM107BQ9H098 131 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 PDCL3Q9H2J4 239 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 HMMRO75330 724 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 CIZ1Q9ULV3 898 aaPredicted RBP7.94□□□□□ -1.14
ERCC6-209ENST00000623073 KIF2AO00139 706 aaPredicted RBP7.94□□□□□ -1.14
ERCC6-209ENST00000623073 PDE4AP27815 886 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 IRX6P78412 446 aaPredicted RBP7.94□□□□□ -1.14
ERCC6-209ENST00000623073 FAM184AQ8NB25 1140 aa7.94□□□□□ -1.14
ERCC6-209ENST00000623073 FMN1Q68DA7 1419 aa7.93□□□□□ -1.14
ERCC6-209ENST00000623073 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
ERCC6-209ENST00000623073 TMF1P82094 1093 aa7.93□□□□□ -1.14
ERCC6-209ENST00000623073 HSP90B2PQ58FF3 399 aa7.93□□□□□ -1.14
ERCC6-209ENST00000623073 DCTN1Q14203 1278 aa7.93□□□□□ -1.14
ERCC6-209ENST00000623073 CREBRFQ8IUR6 639 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 STAC3Q96MF2 364 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 KIF15Q9NS87 1388 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 CTR9Q6PD62 1173 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 ARHGAP35Q9NRY4 1499 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 KIAA1211Q6ZU35 1233 aa7.92□□□□□ -1.14
ERCC6-209ENST00000623073 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 WASHC2AQ641Q2 1341 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 WASHC2CQ9Y4E1 1318 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 CAGE1Q8TC20 777 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 REC8O95072 547 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 AK7Q96M32 723 aa7.91□□□□□ -1.14
ERCC6-209ENST00000623073 PES1O00541 588 aaKnown RBP7.9□□□□□ -1.14
ERCC6-209ENST00000623073 TPM1P09493 284 aa7.9□□□□□ -1.14
ERCC6-209ENST00000623073 C11orf95C9JLR9 678 aaPredicted RBP7.9□□□□□ -1.14
ERCC6-209ENST00000623073 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
ERCC6-209ENST00000623073 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.14
ERCC6-209ENST00000623073 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.9□□□□□ -1.14
ERCC6-209ENST00000623073 MCM2P49736 904 aa7.9□□□□□ -1.15
ERCC6-209ENST00000623073 SLKQ9H2G2 1235 aaPredicted RBP7.9□□□□□ -1.15
ERCC6-209ENST00000623073 ABCC9O60706 1549 aa7.89□□□□□ -1.15
ERCC6-209ENST00000623073 PLCB2Q00722 1185 aa7.89□□□□□ -1.15
ERCC6-209ENST00000623073 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
ERCC6-209ENST00000623073 CNTLNQ9NXG0 1405 aa7.89□□□□□ -1.15
ERCC6-209ENST00000623073 CCDC191Q8NCU4 936 aa7.89□□□□□ -1.15
ERCC6-209ENST00000623073 DDX49Q9Y6V7 483 aaKnown RBP7.89□□□□□ -1.15
ERCC6-209ENST00000623073 NACADO15069 1562 aa7.88□□□□□ -1.15
ERCC6-209ENST00000623073 DEF6Q9H4E7 631 aa7.88□□□□□ -1.15
ERCC6-209ENST00000623073 RDXP35241 583 aaKnown RBP7.88□□□□□ -1.15
ERCC6-209ENST00000623073 FGD1P98174 961 aa7.88□□□□□ -1.15
ERCC6-209ENST00000623073 GOLGA2Q08379 1002 aa7.88□□□□□ -1.15
ERCC6-209ENST00000623073 WWC1Q8IX03 1113 aa7.88□□□□□ -1.15
ERCC6-209ENST00000623073 MYBBP1AQ9BQG0 1328 aaKnown RBP7.87□□□□□ -1.15
ERCC6-209ENST00000623073 GOLGA6L19H0YKK7 550 aa7.87□□□□□ -1.15
ERCC6-209ENST00000623073 LMOD3Q0VAK6 560 aa7.87□□□□□ -1.15
ERCC6-209ENST00000623073 NOC3LQ8WTT2 800 aaKnown RBP7.86□□□□□ -1.15
ERCC6-209ENST00000623073 ROCK1Q13464 1354 aa7.86□□□□□ -1.15
ERCC6-209ENST00000623073 IPO7O95373 1038 aaKnown RBP7.86□□□□□ -1.15
ERCC6-209ENST00000623073 TUBB4AP04350 444 aa7.86□□□□□ -1.15
ERCC6-209ENST00000623073 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
ERCC6-209ENST00000623073 NASPP49321 788 aaPredicted RBP7.86□□□□□ -1.15
ERCC6-209ENST00000623073 TERF1P54274 439 aa7.86□□□□□ -1.15
ERCC6-209ENST00000623073 GPATCH3Q96I76 525 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms