RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
CBWD3-218ENST00000622755 FRMPD1Q5SYB0 1578 aa19.53■□□□□ 0.72
CBWD3-218ENST00000622755 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
CBWD3-218ENST00000622755 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
CBWD3-218ENST00000622755 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
CBWD3-218ENST00000622755 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
CBWD3-218ENST00000622755 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
CBWD3-218ENST00000622755 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
CBWD3-218ENST00000622755 CDC42BPBQ9Y5S2 1711 aa19.5■□□□□ 0.71
CBWD3-218ENST00000622755 ZMYM4Q5VZL5 1548 aa19.49■□□□□ 0.71
CBWD3-218ENST00000622755 POGZQ7Z3K3 1410 aa19.49■□□□□ 0.71
CBWD3-218ENST00000622755 ZNF518AQ6AHZ1 1483 aa19.49■□□□□ 0.71
CBWD3-218ENST00000622755 ARHGEF40Q8TER5 1519 aa19.49■□□□□ 0.71
CBWD3-218ENST00000622755 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
CBWD3-218ENST00000622755 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
CBWD3-218ENST00000622755 ZFYVE16Q7Z3T8 1539 aa19.48■□□□□ 0.71
CBWD3-218ENST00000622755 APLP2Q06481 763 aa19.46■□□□□ 0.71
CBWD3-218ENST00000622755 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-218ENST00000622755 ITSN2Q9NZM3 1697 aa19.44■□□□□ 0.7
CBWD3-218ENST00000622755 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
CBWD3-218ENST00000622755 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
CBWD3-218ENST00000622755 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
CBWD3-218ENST00000622755 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
CBWD3-218ENST00000622755 ABCC1P33527 1531 aa19.41■□□□□ 0.7
CBWD3-218ENST00000622755 GPATCH8Q9UKJ3 1502 aaKnown RBP19.4■□□□□ 0.7
CBWD3-218ENST00000622755 HECW2Q9P2P5 1572 aa19.39■□□□□ 0.69
CBWD3-218ENST00000622755 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-218ENST00000622755 KDM5CP41229 1560 aa19.38■□□□□ 0.69
CBWD3-218ENST00000622755 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
CBWD3-218ENST00000622755 YEATS2Q9ULM3 1422 aa19.37■□□□□ 0.69
CBWD3-218ENST00000622755 BCORL1Q5H9F3 1711 aa19.36■□□□□ 0.69
CBWD3-218ENST00000622755 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
CBWD3-218ENST00000622755 ATP10AO60312 1499 aa19.36■□□□□ 0.69
CBWD3-218ENST00000622755 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
CBWD3-218ENST00000622755 SAMD9LQ8IVG5 1584 aa19.35■□□□□ 0.69
CBWD3-218ENST00000622755 SYCP2Q9BX26 1530 aa19.34■□□□□ 0.69
CBWD3-218ENST00000622755 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
CBWD3-218ENST00000622755 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.69
CBWD3-218ENST00000622755 LRRC9Q6ZRR7 1453 aa19.33■□□□□ 0.68
CBWD3-218ENST00000622755 MLH3Q9UHC1 1453 aa19.33■□□□□ 0.68
CBWD3-218ENST00000622755 ADAMTSL3P82987 1691 aa19.32■□□□□ 0.68
CBWD3-218ENST00000622755 TRAPPC8Q9Y2L5 1435 aa19.32■□□□□ 0.68
CBWD3-218ENST00000622755 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
CBWD3-218ENST00000622755 HNRNPMP52272 730 aaKnown RBP eCLIP19.3■□□□□ 0.68
CBWD3-218ENST00000622755 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
CBWD3-218ENST00000622755 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
CBWD3-218ENST00000622755 MLECQ14165 292 aa19.28■□□□□ 0.68
CBWD3-218ENST00000622755 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.68
CBWD3-218ENST00000622755 REREQ9P2R6 1566 aa19.26■□□□□ 0.67
CBWD3-218ENST00000622755 PTPRMP28827 1452 aa19.26■□□□□ 0.67
CBWD3-218ENST00000622755 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
CBWD3-218ENST00000622755 RSPH4AQ5TD94 716 aa19.25■□□□□ 0.67
CBWD3-218ENST00000622755 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
CBWD3-218ENST00000622755 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
CBWD3-218ENST00000622755 FER1L4A9Z1Z3 1794 aa19.24■□□□□ 0.67
CBWD3-218ENST00000622755 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
CBWD3-218ENST00000622755 ATP7AQ04656 1500 aa19.24■□□□□ 0.67
CBWD3-218ENST00000622755 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
CBWD3-218ENST00000622755 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-218ENST00000622755 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-218ENST00000622755 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
CBWD3-218ENST00000622755 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
CBWD3-218ENST00000622755 AGLP35573 1532 aa19.2■□□□□ 0.66
CBWD3-218ENST00000622755 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-218ENST00000622755 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
CBWD3-218ENST00000622755 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
CBWD3-218ENST00000622755 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
CBWD3-218ENST00000622755 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
CBWD3-218ENST00000622755 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
CBWD3-218ENST00000622755 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
CBWD3-218ENST00000622755 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
CBWD3-218ENST00000622755 MBD5Q9P267 1494 aa19.17■□□□□ 0.66
CBWD3-218ENST00000622755 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
CBWD3-218ENST00000622755 A2MP01023 1474 aa19.15■□□□□ 0.66
CBWD3-218ENST00000622755 CNTLNQ9NXG0 1405 aa19.12■□□□□ 0.65
CBWD3-218ENST00000622755 PLXNC1O60486 1568 aa19.08■□□□□ 0.64
CBWD3-218ENST00000622755 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
CBWD3-218ENST00000622755 GGT6Q6P531 493 aa19.06■□□□□ 0.64
CBWD3-218ENST00000622755 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
CBWD3-218ENST00000622755 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
CBWD3-218ENST00000622755 MAST1Q9Y2H9 1570 aa19.04■□□□□ 0.64
CBWD3-218ENST00000622755 FGD6Q6ZV73 1430 aa19.04■□□□□ 0.64
CBWD3-218ENST00000622755 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
CBWD3-218ENST00000622755 PREX1Q8TCU6 1659 aa19.02■□□□□ 0.64
CBWD3-218ENST00000622755 C3P01024 1663 aa19.02■□□□□ 0.63
CBWD3-218ENST00000622755 KIF3BO15066 747 aa19.01■□□□□ 0.63
CBWD3-218ENST00000622755 CEBPAP49715 358 aaPredicted RBP19■□□□□ 0.63
CBWD3-218ENST00000622755 SETD1BQ9UPS6 1966 aaKnown RBP19■□□□□ 0.63
CBWD3-218ENST00000622755 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
CBWD3-218ENST00000622755 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
CBWD3-218ENST00000622755 CROCC2H7BZ55 1655 aa18.99■□□□□ 0.63
CBWD3-218ENST00000622755 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
CBWD3-218ENST00000622755 SHANK2Q9UPX8 1470 aa18.99■□□□□ 0.63
CBWD3-218ENST00000622755 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
CBWD3-218ENST00000622755 FAM135AQ9P2D6 1515 aa18.97■□□□□ 0.63
CBWD3-218ENST00000622755 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
CBWD3-218ENST00000622755 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
CBWD3-218ENST00000622755 ZMYM3Q14202 1370 aa18.96■□□□□ 0.63
CBWD3-218ENST00000622755 DAPK1P53355 1430 aa18.96■□□□□ 0.63
CBWD3-218ENST00000622755 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms