RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
NPHP4-211ENST00000622020 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
NPHP4-211ENST00000622020 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
NPHP4-211ENST00000622020 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
NPHP4-211ENST00000622020 NBR1Q14596 966 aa21.5■■□□□ 1.03
NPHP4-211ENST00000622020 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
NPHP4-211ENST00000622020 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
NPHP4-211ENST00000622020 ANKRD30BQ9BXX2 1392 aa21.46■■□□□ 1.03
NPHP4-211ENST00000622020 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
NPHP4-211ENST00000622020 ERICH6BQ5W0A0 696 aa21.43■■□□□ 1.02
NPHP4-211ENST00000622020 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
NPHP4-211ENST00000622020 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
NPHP4-211ENST00000622020 CCDC136Q96JN2 1154 aa21.42■■□□□ 1.02
NPHP4-211ENST00000622020 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
NPHP4-211ENST00000622020 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
NPHP4-211ENST00000622020 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
NPHP4-211ENST00000622020 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
NPHP4-211ENST00000622020 KDM2AQ9Y2K7 1162 aa21.41■■□□□ 1.02
NPHP4-211ENST00000622020 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
NPHP4-211ENST00000622020 RPRD2Q5VT52 1461 aaKnown RBP21.38■■□□□ 1.01
NPHP4-211ENST00000622020 DAPK1P53355 1430 aa21.38■■□□□ 1.01
NPHP4-211ENST00000622020 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
NPHP4-211ENST00000622020 PKD2Q13563 968 aa21.37■■□□□ 1.01
NPHP4-211ENST00000622020 ABCC5O15440 1437 aa21.37■■□□□ 1.01
NPHP4-211ENST00000622020 GCC2Q8IWJ2 1684 aa21.37■■□□□ 1.01
NPHP4-211ENST00000622020 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
NPHP4-211ENST00000622020 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
NPHP4-211ENST00000622020 MIA2Q96PC5 1412 aa21.35■■□□□ 1.01
NPHP4-211ENST00000622020 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
NPHP4-211ENST00000622020 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
NPHP4-211ENST00000622020 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
NPHP4-211ENST00000622020 DEKP35659 375 aaKnown RBP21.33■■□□□ 1.01
NPHP4-211ENST00000622020 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1.01
NPHP4-211ENST00000622020 USP47Q96K76 1375 aa21.33■■□□□ 1
NPHP4-211ENST00000622020 FBLN2P98095 1184 aa21.3■■□□□ 1
NPHP4-211ENST00000622020 IQGAP2Q13576 1575 aa21.29■■□□□ 1
NPHP4-211ENST00000622020 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
NPHP4-211ENST00000622020 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
NPHP4-211ENST00000622020 DHX29Q7Z478 1369 aaKnown RBP21.28■■□□□ 1
NPHP4-211ENST00000622020 PRG4Q92954 1404 aaPredicted RBP21.27■■□□□ 1
NPHP4-211ENST00000622020 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
NPHP4-211ENST00000622020 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
NPHP4-211ENST00000622020 WDR62O43379 1518 aa21.24■□□□□ 0.99
NPHP4-211ENST00000622020 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
NPHP4-211ENST00000622020 ROCK1Q13464 1354 aa21.23■□□□□ 0.99
NPHP4-211ENST00000622020 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
NPHP4-211ENST00000622020 ANP32AP39687 249 aaKnown RBP21.22■□□□□ 0.99
NPHP4-211ENST00000622020 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
NPHP4-211ENST00000622020 PZPP20742 1482 aa21.2■□□□□ 0.99
NPHP4-211ENST00000622020 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
NPHP4-211ENST00000622020 EXOC6Q8TAG9 804 aa21.18■□□□□ 0.98
NPHP4-211ENST00000622020 NUP153P49790 1475 aaKnown RBP21.18■□□□□ 0.98
NPHP4-211ENST00000622020 NUP155O75694 1391 aa21.18■□□□□ 0.98
NPHP4-211ENST00000622020 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
NPHP4-211ENST00000622020 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
NPHP4-211ENST00000622020 RGL3Q3MIN7 710 aa21.17■□□□□ 0.98
NPHP4-211ENST00000622020 ZBTB47Q9UFB7 747 aaPredicted RBP21.17■□□□□ 0.98
NPHP4-211ENST00000622020 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
NPHP4-211ENST00000622020 IPO9Q96P70 1041 aaKnown RBP21.15■□□□□ 0.98
NPHP4-211ENST00000622020 KIAA1107Q9UPP5 1409 aa21.15■□□□□ 0.98
NPHP4-211ENST00000622020 SKAP1Q86WV1 359 aa21.14■□□□□ 0.98
NPHP4-211ENST00000622020 CAMSAP2Q08AD1 1489 aa21.13■□□□□ 0.97
NPHP4-211ENST00000622020 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
NPHP4-211ENST00000622020 PLB1Q6P1J6 1458 aa21.11■□□□□ 0.97
NPHP4-211ENST00000622020 PLIN1O60240 522 aa21.11■□□□□ 0.97
NPHP4-211ENST00000622020 CDCA7LQ96GN5 454 aa21.11■□□□□ 0.97
NPHP4-211ENST00000622020 DISP1Q96F81 1524 aa21.1■□□□□ 0.97
NPHP4-211ENST00000622020 RNF123Q5XPI4 1314 aa21.1■□□□□ 0.97
NPHP4-211ENST00000622020 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
NPHP4-211ENST00000622020 HNRNPMP52272 730 aaKnown RBP eCLIP21.1■□□□□ 0.979e-7■■■■■ 28.6
NPHP4-211ENST00000622020 CC2D1BQ5T0F9 858 aaKnown RBP21.1■□□□□ 0.97
NPHP4-211ENST00000622020 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
NPHP4-211ENST00000622020 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
NPHP4-211ENST00000622020 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
NPHP4-211ENST00000622020 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.96
NPHP4-211ENST00000622020 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.96
NPHP4-211ENST00000622020 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.96
NPHP4-211ENST00000622020 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.96
NPHP4-211ENST00000622020 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
NPHP4-211ENST00000622020 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
NPHP4-211ENST00000622020 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
NPHP4-211ENST00000622020 PRKCSHP14314 528 aaPredicted RBP21.06■□□□□ 0.96
NPHP4-211ENST00000622020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.96
NPHP4-211ENST00000622020 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
NPHP4-211ENST00000622020 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
NPHP4-211ENST00000622020 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
NPHP4-211ENST00000622020 NBPF1Q3BBV0 1214 aa21.04■□□□□ 0.96
NPHP4-211ENST00000622020 MBD5Q9P267 1494 aa21.04■□□□□ 0.96
NPHP4-211ENST00000622020 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
NPHP4-211ENST00000622020 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
NPHP4-211ENST00000622020 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
NPHP4-211ENST00000622020 MYT1LQ9UL68 1186 aa21.02■□□□□ 0.96
NPHP4-211ENST00000622020 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
NPHP4-211ENST00000622020 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
NPHP4-211ENST00000622020 KDM5CP41229 1560 aa21.01■□□□□ 0.95
NPHP4-211ENST00000622020 KIF14Q15058 1648 aa21.01■□□□□ 0.95
NPHP4-211ENST00000622020 RALBP1Q15311 655 aa20.99■□□□□ 0.95
NPHP4-211ENST00000622020 POLR1AO95602 1720 aaPredicted RBP20.99■□□□□ 0.95
NPHP4-211ENST00000622020 PDE4AP27815 886 aa20.99■□□□□ 0.95
NPHP4-211ENST00000622020 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms