RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-215ENST00000621534 ARAP3Q8WWN8 1544 aa23.06■■□□□ 1.28
PSMD13-215ENST00000621534 ABCA9Q8IUA7 1624 aa23.05■■□□□ 1.28
PSMD13-215ENST00000621534 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
PSMD13-215ENST00000621534 TTC37Q6PGP7 1564 aa23.02■■□□□ 1.28
PSMD13-215ENST00000621534 ITSN2Q9NZM3 1697 aa23.02■■□□□ 1.28
PSMD13-215ENST00000621534 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
PSMD13-215ENST00000621534 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.27
PSMD13-215ENST00000621534 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
PSMD13-215ENST00000621534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23■■□□□ 1.279e-11■■■□□ 17.3
PSMD13-215ENST00000621534 MIA2Q96PC5 1412 aa22.98■■□□□ 1.27
PSMD13-215ENST00000621534 TCOF1Q13428 1488 aaKnown RBP22.98■■□□□ 1.27
PSMD13-215ENST00000621534 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
PSMD13-215ENST00000621534 RAPGEF3O95398 923 aa22.97■■□□□ 1.27
PSMD13-215ENST00000621534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.275e-6■■■□□ 14.8
PSMD13-215ENST00000621534 PREX2Q70Z35 1606 aa22.95■■□□□ 1.26
PSMD13-215ENST00000621534 NEO1Q92859 1461 aa22.95■■□□□ 1.26
PSMD13-215ENST00000621534 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
PSMD13-215ENST00000621534 CDC42BPBQ9Y5S2 1711 aa22.92■■□□□ 1.26
PSMD13-215ENST00000621534 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
PSMD13-215ENST00000621534 ITGAEP38570 1179 aa22.89■■□□□ 1.26
PSMD13-215ENST00000621534 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.25
PSMD13-215ENST00000621534 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.25
PSMD13-215ENST00000621534 ZNF644Q9H582 1327 aaPredicted RBP22.88■■□□□ 1.25
PSMD13-215ENST00000621534 FRMPD1Q5SYB0 1578 aa22.88■■□□□ 1.25
PSMD13-215ENST00000621534 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
PSMD13-215ENST00000621534 ARHGAP5Q13017 1502 aa22.84■■□□□ 1.25
PSMD13-215ENST00000621534 SAMD9LQ8IVG5 1584 aa22.83■■□□□ 1.25
PSMD13-215ENST00000621534 ADAMTSL3P82987 1691 aa22.83■■□□□ 1.25
PSMD13-215ENST00000621534 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
PSMD13-215ENST00000621534 PLCH2O75038 1416 aa22.82■■□□□ 1.24
PSMD13-215ENST00000621534 ZNF777Q9ULD5 760 aaPredicted RBP22.81■■□□□ 1.24
PSMD13-215ENST00000621534 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
PSMD13-215ENST00000621534 PTPRMP28827 1452 aa22.81■■□□□ 1.24
PSMD13-215ENST00000621534 AKNAQ7Z591 1439 aa22.8■■□□□ 1.24
PSMD13-215ENST00000621534 FANCAO15360 1455 aa22.8■■□□□ 1.24
PSMD13-215ENST00000621534 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
PSMD13-215ENST00000621534 DAPK1P53355 1430 aa22.78■■□□□ 1.24
PSMD13-215ENST00000621534 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
PSMD13-215ENST00000621534 RICTORQ6R327 1708 aa22.77■■□□□ 1.24
PSMD13-215ENST00000621534 CROCC2H7BZ55 1655 aa22.77■■□□□ 1.24
PSMD13-215ENST00000621534 ABCC5O15440 1437 aa22.77■■□□□ 1.23
PSMD13-215ENST00000621534 ARHGEF40Q8TER5 1519 aa22.76■■□□□ 1.23
PSMD13-215ENST00000621534 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
PSMD13-215ENST00000621534 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
PSMD13-215ENST00000621534 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
PSMD13-215ENST00000621534 ARHGEF5Q12774 1597 aa22.72■■□□□ 1.23
PSMD13-215ENST00000621534 MBD5Q9P267 1494 aa22.71■■□□□ 1.23
PSMD13-215ENST00000621534 ABCC1P33527 1531 aa22.71■■□□□ 1.23
PSMD13-215ENST00000621534 EFCAB2Q5VUJ9 269 aa22.69■■□□□ 1.22
PSMD13-215ENST00000621534 ARHGEF12Q9NZN5 1544 aa22.69■■□□□ 1.22
PSMD13-215ENST00000621534 ZMYM4Q5VZL5 1548 aa22.68■■□□□ 1.22
PSMD13-215ENST00000621534 PLEKHH2Q8IVE3 1493 aa22.68■■□□□ 1.22
PSMD13-215ENST00000621534 CHIC2Q9UKJ5 165 aa22.67■■□□□ 1.22
PSMD13-215ENST00000621534 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
PSMD13-215ENST00000621534 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.225e-8■■■■■ 27
PSMD13-215ENST00000621534 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 ZFYVE16Q7Z3T8 1539 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
PSMD13-215ENST00000621534 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
PSMD13-215ENST00000621534 GCC2Q8IWJ2 1684 aa22.65■■□□□ 1.22
PSMD13-215ENST00000621534 NAIPQ13075 1403 aa22.64■■□□□ 1.22
PSMD13-215ENST00000621534 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.22
PSMD13-215ENST00000621534 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.21
PSMD13-215ENST00000621534 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
PSMD13-215ENST00000621534 ROCK1Q13464 1354 aa22.62■■□□□ 1.21
PSMD13-215ENST00000621534 POGZQ7Z3K3 1410 aa22.62■■□□□ 1.21
PSMD13-215ENST00000621534 SIGLEC1Q9BZZ2 1709 aa22.62■■□□□ 1.21
PSMD13-215ENST00000621534 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
PSMD13-215ENST00000621534 C9orf84Q5VXU9 1444 aa22.61■■□□□ 1.21
PSMD13-215ENST00000621534 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
PSMD13-215ENST00000621534 RRP7BPQ9NSQ0 103 aa22.6■■□□□ 1.21
PSMD13-215ENST00000621534 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
PSMD13-215ENST00000621534 TRAPPC8Q9Y2L5 1435 aa22.58■■□□□ 1.21
PSMD13-215ENST00000621534 MAST1Q9Y2H9 1570 aa22.58■■□□□ 1.21
PSMD13-215ENST00000621534 MLECQ14165 292 aa22.57■■□□□ 1.2
PSMD13-215ENST00000621534 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
PSMD13-215ENST00000621534 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
PSMD13-215ENST00000621534 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
PSMD13-215ENST00000621534 TSPY4P0CV99 314 aa22.52■■□□□ 1.2
PSMD13-215ENST00000621534 TSPY10P0CW01 314 aa22.52■■□□□ 1.2
PSMD13-215ENST00000621534 ATP10AO60312 1499 aa22.52■■□□□ 1.2
PSMD13-215ENST00000621534 HSPA2P54652 639 aa22.5■■□□□ 1.19
PSMD13-215ENST00000621534 FBXO41Q8TF61 875 aa22.5■■□□□ 1.19
PSMD13-215ENST00000621534 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
PSMD13-215ENST00000621534 FER1L4A9Z1Z3 1794 aa22.5■■□□□ 1.19
PSMD13-215ENST00000621534 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
PSMD13-215ENST00000621534 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
PSMD13-215ENST00000621534 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
PSMD13-215ENST00000621534 HRCP23327 699 aa22.48■■□□□ 1.19
PSMD13-215ENST00000621534 AFAP1Q8N556 730 aa22.48■■□□□ 1.19
PSMD13-215ENST00000621534 INO80Q9ULG1 1556 aaPredicted RBP22.48■■□□□ 1.19
PSMD13-215ENST00000621534 KIF15Q9NS87 1388 aa22.46■■□□□ 1.19
PSMD13-215ENST00000621534 KDM5CP41229 1560 aa22.45■■□□□ 1.18
PSMD13-215ENST00000621534 ATP7AQ04656 1500 aa22.44■■□□□ 1.18
PSMD13-215ENST00000621534 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
PSMD13-215ENST00000621534 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms