RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 BBXQ8WY36 941 aaPredicted RBP18.15■□□□□ 0.5
MALAT1-217ENST00000620902 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
MALAT1-217ENST00000620902 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.15■□□□□ 0.5
MALAT1-217ENST00000620902 C3orf67Q6ZVT6 689 aa18.14■□□□□ 0.49
MALAT1-217ENST00000620902 MICALL2Q8IY33 904 aa18.1■□□□□ 0.49
MALAT1-217ENST00000620902 GTPBP6O43824 516 aaPredicted RBP18.05■□□□□ 0.48
MALAT1-217ENST00000620902 SLAIN1Q8ND83 568 aa18.04■□□□□ 0.48
MALAT1-217ENST00000620902 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.04■□□□□ 0.48
MALAT1-217ENST00000620902 PPP1R37O75864 691 aa18.03■□□□□ 0.48
MALAT1-217ENST00000620902 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
MALAT1-217ENST00000620902 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
MALAT1-217ENST00000620902 SPRYD3Q8NCJ5 442 aa17.92■□□□□ 0.46
MALAT1-217ENST00000620902 NESP48681 1621 aa17.87■□□□□ 0.45
MALAT1-217ENST00000620902 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
MALAT1-217ENST00000620902 SNPHO15079 494 aa17.84■□□□□ 0.45
MALAT1-217ENST00000620902 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
MALAT1-217ENST00000620902 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.45
MALAT1-217ENST00000620902 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.45
MALAT1-217ENST00000620902 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.45
MALAT1-217ENST00000620902 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
MALAT1-217ENST00000620902 TMC2Q8TDI7 906 aa17.78■□□□□ 0.44
MALAT1-217ENST00000620902 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
MALAT1-217ENST00000620902 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
MALAT1-217ENST00000620902 KIF3CO14782 793 aa17.76■□□□□ 0.43
MALAT1-217ENST00000620902 C2orf72A6NCS6 295 aa17.74■□□□□ 0.43
MALAT1-217ENST00000620902 GPHNQ9NQX3 736 aaPredicted RBP17.71■□□□□ 0.43
MALAT1-217ENST00000620902 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
MALAT1-217ENST00000620902 PDE4AP27815 886 aa17.67■□□□□ 0.42
MALAT1-217ENST00000620902 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
MALAT1-217ENST00000620902 CRISPLD2Q9H0B8 497 aa17.65■□□□□ 0.42
MALAT1-217ENST00000620902 FOXK1P85037 733 aa17.63■□□□□ 0.41
MALAT1-217ENST00000620902 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
MALAT1-217ENST00000620902 HOXB3P14651 431 aaPredicted RBP17.62■□□□□ 0.41
MALAT1-217ENST00000620902 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
MALAT1-217ENST00000620902 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
MALAT1-217ENST00000620902 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
MALAT1-217ENST00000620902 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
MALAT1-217ENST00000620902 ST18O60284 1047 aa17.59■□□□□ 0.41
MALAT1-217ENST00000620902 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.4
MALAT1-217ENST00000620902 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
MALAT1-217ENST00000620902 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
MALAT1-217ENST00000620902 DSG2Q14126 1118 aa17.55■□□□□ 0.4
MALAT1-217ENST00000620902 LCE2DQ5TA82 110 aaPredicted RBP17.55■□□□□ 0.4
MALAT1-217ENST00000620902 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
MALAT1-217ENST00000620902 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
MALAT1-217ENST00000620902 PLPP6Q8IY26 295 aa17.54■□□□□ 0.4
MALAT1-217ENST00000620902 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
MALAT1-217ENST00000620902 SLC34A2O95436 690 aa17.52■□□□□ 0.4
MALAT1-217ENST00000620902 DDX27Q96GQ7 796 aaKnown RBP17.51■□□□□ 0.39
MALAT1-217ENST00000620902 MFSD10Q14728 455 aa17.5■□□□□ 0.39
MALAT1-217ENST00000620902 PPP1R15BQ5SWA1 713 aa17.5■□□□□ 0.39
MALAT1-217ENST00000620902 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
MALAT1-217ENST00000620902 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
MALAT1-217ENST00000620902 HOXB1P14653 301 aaPredicted RBP17.46■□□□□ 0.39
MALAT1-217ENST00000620902 GPR153Q6NV75 609 aa17.43■□□□□ 0.38
MALAT1-217ENST00000620902 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
MALAT1-217ENST00000620902 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
MALAT1-217ENST00000620902 WDR62O43379 1518 aa17.42■□□□□ 0.38
MALAT1-217ENST00000620902 PTCD2Q8WV60 388 aaKnown RBP17.41■□□□□ 0.38
MALAT1-217ENST00000620902 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
MALAT1-217ENST00000620902 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
MALAT1-217ENST00000620902 POTEMA6NI47 508 aa17.38■□□□□ 0.37
MALAT1-217ENST00000620902 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
MALAT1-217ENST00000620902 PCDHGA4Q9Y5G9 962 aa17.38■□□□□ 0.37
MALAT1-217ENST00000620902 TBC1D12O60347 775 aa17.37■□□□□ 0.37
MALAT1-217ENST00000620902 ARSIQ5FYB1 569 aa17.37■□□□□ 0.37
MALAT1-217ENST00000620902 MARVELD3Q96A59 401 aa17.36■□□□□ 0.37
MALAT1-217ENST00000620902 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
MALAT1-217ENST00000620902 EMP3P54852 163 aa17.35■□□□□ 0.37
MALAT1-217ENST00000620902 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
MALAT1-217ENST00000620902 WDR70Q9NW82 654 aa17.34■□□□□ 0.37
MALAT1-217ENST00000620902 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
MALAT1-217ENST00000620902 OXER1Q8TDS5 423 aa17.32■□□□□ 0.36
MALAT1-217ENST00000620902 CAMK2BQ13554 666 aa17.29■□□□□ 0.36
MALAT1-217ENST00000620902 KHSRPQ92945 711 aaKnown RBP eCLIP17.27■□□□□ 0.36
MALAT1-217ENST00000620902 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
MALAT1-217ENST00000620902 NUDT7P0C024 238 aa17.25■□□□□ 0.35
MALAT1-217ENST00000620902 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
MALAT1-217ENST00000620902 ERBB3P21860 1342 aa17.23■□□□□ 0.35
MALAT1-217ENST00000620902 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
MALAT1-217ENST00000620902 EMILIN3Q9NT22 766 aa17.23■□□□□ 0.35
MALAT1-217ENST00000620902 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
MALAT1-217ENST00000620902 E2F4Q16254 413 aa17.21■□□□□ 0.35
MALAT1-217ENST00000620902 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
MALAT1-217ENST00000620902 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
MALAT1-217ENST00000620902 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
MALAT1-217ENST00000620902 HS3ST6Q96QI5 342 aa17.19■□□□□ 0.34
MALAT1-217ENST00000620902 LHX6Q9UPM6 363 aa17.15■□□□□ 0.34
MALAT1-217ENST00000620902 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
MALAT1-217ENST00000620902 VARS2Q5ST30 1063 aaKnown RBP17.14■□□□□ 0.33
MALAT1-217ENST00000620902 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
MALAT1-217ENST00000620902 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
MALAT1-217ENST00000620902 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
MALAT1-217ENST00000620902 EVI5O60447 810 aa17.11■□□□□ 0.33
MALAT1-217ENST00000620902 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
MALAT1-217ENST00000620902 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
MALAT1-217ENST00000620902 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
MALAT1-217ENST00000620902 DPYSL4O14531 572 aa17.08■□□□□ 0.32
MALAT1-217ENST00000620902 ZNF687Q8N1G0 1237 aa17.06■□□□□ 0.32
MALAT1-217ENST00000620902 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms