RNA–Protein interactions for RNA: ENST00000620895.1

PMPCA-211, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 3

Gene PMPCA, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-211ENST00000620895 CDK11AQ9UQ88 783 aaPredicted RBP29.01■■■□□ 2.23
PMPCA-211ENST00000620895 MAGI2Q86UL8 1455 aa29■■■□□ 2.23
PMPCA-211ENST00000620895 MADDQ8WXG6 1647 aa28.98■■■□□ 2.23
PMPCA-211ENST00000620895 PLCH2O75038 1416 aa28.98■■■□□ 2.23
PMPCA-211ENST00000620895 POGZQ7Z3K3 1410 aa28.98■■■□□ 2.23
PMPCA-211ENST00000620895 ZFYVE16Q7Z3T8 1539 aa28.95■■■□□ 2.23
PMPCA-211ENST00000620895 CCDC18Q5T9S5 1454 aa28.92■■■□□ 2.22
PMPCA-211ENST00000620895 MYO5CQ9NQX4 1742 aa28.91■■■□□ 2.22
PMPCA-211ENST00000620895 SCAPERQ9BY12 1400 aa28.9■■■□□ 2.22
PMPCA-211ENST00000620895 KIF14Q15058 1648 aa28.89■■■□□ 2.22
PMPCA-211ENST00000620895 EFCAB2Q5VUJ9 269 aa28.88■■■□□ 2.21
PMPCA-211ENST00000620895 RIMS1Q86UR5 1692 aaKnown RBP28.87■■■□□ 2.21
PMPCA-211ENST00000620895 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
PMPCA-211ENST00000620895 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
PMPCA-211ENST00000620895 LMTK3Q96Q04 1460 aa28.8■■■□□ 2.2
PMPCA-211ENST00000620895 TIAM1Q13009 1591 aa28.79■■■□□ 2.2
PMPCA-211ENST00000620895 ZNF518AQ6AHZ1 1483 aa28.79■■■□□ 2.2
PMPCA-211ENST00000620895 MAP3K1Q13233 1512 aa28.79■■■□□ 2.2
PMPCA-211ENST00000620895 ARHGAP5Q13017 1502 aa28.78■■■□□ 2.2
PMPCA-211ENST00000620895 ATP10AO60312 1499 aa28.78■■■□□ 2.2
PMPCA-211ENST00000620895 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
PMPCA-211ENST00000620895 SIGLEC1Q9BZZ2 1709 aa28.76■■■□□ 2.19
PMPCA-211ENST00000620895 APLP2Q06481 763 aa28.74■■■□□ 2.19
PMPCA-211ENST00000620895 FER1L4A9Z1Z3 1794 aa28.74■■■□□ 2.19
PMPCA-211ENST00000620895 KDM5CP41229 1560 aa28.71■■■□□ 2.19
PMPCA-211ENST00000620895 KANK4Q5T7N3 995 aaPredicted RBP28.7■■■□□ 2.18
PMPCA-211ENST00000620895 MLECQ14165 292 aa28.69■■■□□ 2.18
PMPCA-211ENST00000620895 MTUS2Q5JR59 1369 aa28.69■■■□□ 2.18
PMPCA-211ENST00000620895 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
PMPCA-211ENST00000620895 FBXO41Q8TF61 875 aa28.68■■■□□ 2.18
PMPCA-211ENST00000620895 LRRC9Q6ZRR7 1453 aa28.67■■■□□ 2.18
PMPCA-211ENST00000620895 PREX2Q70Z35 1606 aa28.65■■■□□ 2.18
PMPCA-211ENST00000620895 CDC42BPBQ9Y5S2 1711 aa28.65■■■□□ 2.18
PMPCA-211ENST00000620895 EHBP1L1Q8N3D4 1523 aa28.64■■■□□ 2.18
PMPCA-211ENST00000620895 REREQ9P2R6 1566 aa28.62■■■□□ 2.17
PMPCA-211ENST00000620895 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
PMPCA-211ENST00000620895 AFAP1Q8N556 730 aa28.62■■■□□ 2.17
PMPCA-211ENST00000620895 MYT1LQ9UL68 1186 aa28.61■■■□□ 2.17
PMPCA-211ENST00000620895 MLH3Q9UHC1 1453 aa28.6■■■□□ 2.17
PMPCA-211ENST00000620895 ABCC1P33527 1531 aa28.59■■■□□ 2.17
PMPCA-211ENST00000620895 DIP2CQ9Y2E4 1556 aa28.58■■■□□ 2.17
PMPCA-211ENST00000620895 HSPA2P54652 639 aa28.56■■■□□ 2.16
PMPCA-211ENST00000620895 PREX1Q8TCU6 1659 aa28.55■■■□□ 2.16
PMPCA-211ENST00000620895 ITSN2Q9NZM3 1697 aa28.54■■■□□ 2.16
PMPCA-211ENST00000620895 SUPT6HQ7KZ85 1726 aaKnown RBP28.53■■■□□ 2.16
PMPCA-211ENST00000620895 CDC42BPAQ5VT25 1732 aa28.52■■■□□ 2.16
PMPCA-211ENST00000620895 ABCA6Q8N139 1617 aa28.52■■■□□ 2.16
PMPCA-211ENST00000620895 PPARGC1BQ86YN6 1023 aaKnown RBP28.51■■■□□ 2.15
PMPCA-211ENST00000620895 AGLP35573 1532 aa28.51■■■□□ 2.15
PMPCA-211ENST00000620895 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
PMPCA-211ENST00000620895 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
PMPCA-211ENST00000620895 SETD1BQ9UPS6 1966 aaKnown RBP28.45■■■□□ 2.14
PMPCA-211ENST00000620895 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.14
PMPCA-211ENST00000620895 UHRF1BP1Q6BDS2 1440 aa28.44■■■□□ 2.14
PMPCA-211ENST00000620895 CCNB3Q8WWL7 1395 aa28.44■■■□□ 2.14
PMPCA-211ENST00000620895 GPATCH8Q9UKJ3 1502 aaKnown RBP28.43■■■□□ 2.14
PMPCA-211ENST00000620895 KIDINS220Q9ULH0 1771 aa28.43■■■□□ 2.14
PMPCA-211ENST00000620895 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
PMPCA-211ENST00000620895 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
PMPCA-211ENST00000620895 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
PMPCA-211ENST00000620895 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
PMPCA-211ENST00000620895 DMRT2Q9Y5R5 561 aa28.39■■■□□ 2.14
PMPCA-211ENST00000620895 ZNF777Q9ULD5 760 aaPredicted RBP28.38■■■□□ 2.13
PMPCA-211ENST00000620895 KIAA1107Q9UPP5 1409 aa28.37■■■□□ 2.13
PMPCA-211ENST00000620895 C3P01024 1663 aa28.37■■■□□ 2.13
PMPCA-211ENST00000620895 SYCP2Q9BX26 1530 aa28.37■■■□□ 2.13
PMPCA-211ENST00000620895 SPAG9O60271 1321 aaKnown RBP28.35■■■□□ 2.13
PMPCA-211ENST00000620895 CERKQ8TCT0 537 aa28.33■■■□□ 2.13
PMPCA-211ENST00000620895 CFDP1Q9UEE9 299 aaPredicted RBP28.33■■■□□ 2.13
PMPCA-211ENST00000620895 MYOM3Q5VTT5 1437 aa28.33■■■□□ 2.13
PMPCA-211ENST00000620895 ATP7AQ04656 1500 aa28.3■■■□□ 2.12
PMPCA-211ENST00000620895 MROH2AA6NES4 1674 aa28.29■■■□□ 2.12
PMPCA-211ENST00000620895 HNRNPMP52272 730 aaKnown RBP eCLIP28.28■■■□□ 2.12
PMPCA-211ENST00000620895 STRCQ7RTU9 1775 aa28.28■■■□□ 2.12
PMPCA-211ENST00000620895 INO80Q9ULG1 1556 aaPredicted RBP28.27■■■□□ 2.12
PMPCA-211ENST00000620895 NPATQ14207 1427 aa28.25■■■□□ 2.11
PMPCA-211ENST00000620895 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
PMPCA-211ENST00000620895 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
PMPCA-211ENST00000620895 PLXNC1O60486 1568 aa28.23■■■□□ 2.11
PMPCA-211ENST00000620895 PTPRTO14522 1441 aa28.22■■■□□ 2.11
PMPCA-211ENST00000620895 FGD6Q6ZV73 1430 aa28.22■■■□□ 2.11
PMPCA-211ENST00000620895 A2MP01023 1474 aa28.21■■■□□ 2.11
PMPCA-211ENST00000620895 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
PMPCA-211ENST00000620895 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
PMPCA-211ENST00000620895 CAMSAP2Q08AD1 1489 aa28.16■■■□□ 2.1
PMPCA-211ENST00000620895 PPP6R1Q9UPN7 881 aa28.16■■■□□ 2.1
PMPCA-211ENST00000620895 PTPN23Q9H3S7 1636 aa28.16■■■□□ 2.1
PMPCA-211ENST00000620895 TCOF1Q13428 1488 aaKnown RBP28.14■■■□□ 2.09
PMPCA-211ENST00000620895 RTEL1-TNFRSF6BF6WH68 1400 aa28.13■■■□□ 2.09
PMPCA-211ENST00000620895 NCOA1Q15788 1441 aa28.13■■■□□ 2.09
PMPCA-211ENST00000620895 CLTCQ00610 1675 aaKnown RBP28.12■■■□□ 2.09
PMPCA-211ENST00000620895 MBD5Q9P267 1494 aa28.11■■■□□ 2.09
PMPCA-211ENST00000620895 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
PMPCA-211ENST00000620895 GGT6Q6P531 493 aa28.08■■■□□ 2.09
PMPCA-211ENST00000620895 CAMSAP1Q5T5Y3 1602 aa28.07■■■□□ 2.08
PMPCA-211ENST00000620895 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
PMPCA-211ENST00000620895 RSPH4AQ5TD94 716 aa28.06■■■□□ 2.08
PMPCA-211ENST00000620895 ZNF142P52746 1687 aaPredicted RBP28.06■■■□□ 2.08
PMPCA-211ENST00000620895 MYO3AQ8NEV4 1616 aa28.03■■■□□ 2.08
PMPCA-211ENST00000620895 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms