RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CLSTN1O94985 981 aa9.13□□□□□ -0.95
COLCA1-205ENST00000620864 CFAP53Q96M91 514 aa9.13□□□□□ -0.95
COLCA1-205ENST00000620864 FTSJ3Q8IY81 847 aaKnown RBP9.13□□□□□ -0.95
COLCA1-205ENST00000620864 DRC7Q8IY82 874 aa9.13□□□□□ -0.95
COLCA1-205ENST00000620864 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
COLCA1-205ENST00000620864 GOLGA6L3A6NEY3 463 aa9.12□□□□□ -0.95
COLCA1-205ENST00000620864 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
COLCA1-205ENST00000620864 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
COLCA1-205ENST00000620864 TPM4P67936 248 aa9.12□□□□□ -0.95
COLCA1-205ENST00000620864 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
COLCA1-205ENST00000620864 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
COLCA1-205ENST00000620864 GGT6Q6P531 493 aa9.11□□□□□ -0.95
COLCA1-205ENST00000620864 NOC3LQ8WTT2 800 aaKnown RBP9.1□□□□□ -0.95
COLCA1-205ENST00000620864 CCDC34Q96HJ3 373 aa9.1□□□□□ -0.95
COLCA1-205ENST00000620864 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
COLCA1-205ENST00000620864 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
COLCA1-205ENST00000620864 CFDP1Q9UEE9 299 aaPredicted RBP9.1□□□□□ -0.95
COLCA1-205ENST00000620864 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
COLCA1-205ENST00000620864 ISY1Q9ULR0 285 aaKnown RBP9.09□□□□□ -0.95
COLCA1-205ENST00000620864 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
COLCA1-205ENST00000620864 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
COLCA1-205ENST00000620864 GPS2Q13227 327 aa9.08□□□□□ -0.96
COLCA1-205ENST00000620864 PHF14O94880 888 aa9.08□□□□□ -0.96
COLCA1-205ENST00000620864 RGL3Q3MIN7 710 aa9.08□□□□□ -0.96
COLCA1-205ENST00000620864 POGKQ9P215 609 aa9.07□□□□□ -0.96
COLCA1-205ENST00000620864 FGD1P98174 961 aa9.06□□□□□ -0.96
COLCA1-205ENST00000620864 RRP7BPQ9NSQ0 103 aa9.06□□□□□ -0.96
COLCA1-205ENST00000620864 MIER1Q8N108 512 aa9.06□□□□□ -0.96
COLCA1-205ENST00000620864 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
COLCA1-205ENST00000620864 CWC22Q9HCG8 908 aaKnown RBP9.06□□□□□ -0.96
COLCA1-205ENST00000620864 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
COLCA1-205ENST00000620864 G3V3G9 751 aa9.05□□□□□ -0.96
COLCA1-205ENST00000620864 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
COLCA1-205ENST00000620864 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
COLCA1-205ENST00000620864 AIDAQ96BJ3 306 aa9.04□□□□□ -0.96
COLCA1-205ENST00000620864 NOM1Q5C9Z4 860 aaKnown RBP9.04□□□□□ -0.96
COLCA1-205ENST00000620864 PDE4CQ08493 712 aa9.04□□□□□ -0.96
COLCA1-205ENST00000620864 MTERF4Q7Z6M4 381 aaKnown RBP9.03□□□□□ -0.96
COLCA1-205ENST00000620864 PPP6R1Q9UPN7 881 aa9.03□□□□□ -0.96
COLCA1-205ENST00000620864 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
COLCA1-205ENST00000620864 IRX6P78412 446 aaPredicted RBP9.03□□□□□ -0.96
COLCA1-205ENST00000620864 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.96
COLCA1-205ENST00000620864 KCNJ4P48050 445 aa9.02□□□□□ -0.96
COLCA1-205ENST00000620864 SOX12O15370 315 aa9.02□□□□□ -0.97
COLCA1-205ENST00000620864 TEX35Q5T0J7 233 aa9.02□□□□□ -0.97
COLCA1-205ENST00000620864 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
COLCA1-205ENST00000620864 ANO8Q9HCE9 1232 aaPredicted RBP9.01□□□□□ -0.97
COLCA1-205ENST00000620864 NUDCQ9Y266 331 aa9.01□□□□□ -0.97
COLCA1-205ENST00000620864 SUPT16HQ9Y5B9 1047 aaKnown RBP9.01□□□□□ -0.97
COLCA1-205ENST00000620864 SOGA1O94964 1423 aa9.01□□□□□ -0.97
COLCA1-205ENST00000620864 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
COLCA1-205ENST00000620864 CCDC70Q6NSX1 233 aa9.01□□□□□ -0.97
COLCA1-205ENST00000620864 PAK3O75914 559 aaPredicted RBP9.01□□□□□ -0.97
COLCA1-205ENST00000620864 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
COLCA1-205ENST00000620864 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
COLCA1-205ENST00000620864 KNSTRNQ9Y448 316 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 KANK1Q14678 1352 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 MAPK8IP3Q9UPT6 1336 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 MAP7D2Q96T17 732 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 EID1Q9Y6B2 187 aa9□□□□□ -0.97
COLCA1-205ENST00000620864 CUX2O14529 1486 aa8.99□□□□□ -0.97
COLCA1-205ENST00000620864 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
COLCA1-205ENST00000620864 RSF1Q96T23 1441 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-205ENST00000620864 TPM3P06753 285 aa8.99□□□□□ -0.97
COLCA1-205ENST00000620864 ZNF526Q8TF50 670 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-205ENST00000620864 CHMP4CQ96CF2 233 aa8.98□□□□□ -0.97
COLCA1-205ENST00000620864 DDX11L8A8MPP1 907 aa8.98□□□□□ -0.97
COLCA1-205ENST00000620864 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
COLCA1-205ENST00000620864 GNL2Q13823 731 aaKnown RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 SKOR2Q2VWA4 1001 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 BAZ1AQ9NRL2 1556 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 CCER2I3L3R5 266 aa8.97□□□□□ -0.97
COLCA1-205ENST00000620864 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
COLCA1-205ENST00000620864 NAP1L2Q9ULW6 460 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
COLCA1-205ENST00000620864 RGS3P49796 1198 aa8.96□□□□□ -0.97
COLCA1-205ENST00000620864 CLIP1P30622 1438 aa8.96□□□□□ -0.97
COLCA1-205ENST00000620864 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.98
COLCA1-205ENST00000620864 OS9Q13438 667 aaPredicted RBP8.96□□□□□ -0.98
COLCA1-205ENST00000620864 SAFB2Q14151 953 aaKnown RBP eCLIP8.96□□□□□ -0.98
COLCA1-205ENST00000620864 HMMRO75330 724 aa8.96□□□□□ -0.98
COLCA1-205ENST00000620864 GRM1Q13255 1194 aa8.96□□□□□ -0.98
COLCA1-205ENST00000620864 STK26Q9P289 416 aa8.96□□□□□ -0.98
COLCA1-205ENST00000620864 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
COLCA1-205ENST00000620864 RRP12Q5JTH9 1297 aaKnown RBP8.95□□□□□ -0.98
COLCA1-205ENST00000620864 CDR1P51861 262 aa8.95□□□□□ -0.98
COLCA1-205ENST00000620864 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
COLCA1-205ENST00000620864 CWC15Q9P013 229 aaKnown RBP8.94□□□□□ -0.98
COLCA1-205ENST00000620864 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
COLCA1-205ENST00000620864 ZNF771Q7L3S4 317 aaPredicted RBP8.94□□□□□ -0.98
COLCA1-205ENST00000620864 ACBD3Q9H3P7 528 aa8.94□□□□□ -0.98
COLCA1-205ENST00000620864 IPO9Q96P70 1041 aaKnown RBP8.94□□□□□ -0.98
COLCA1-205ENST00000620864 CEP89Q96ST8 783 aa8.94□□□□□ -0.98
COLCA1-205ENST00000620864 ZNF330Q9Y3S2 320 aaPredicted RBP8.94□□□□□ -0.98
COLCA1-205ENST00000620864 IPO8O15397 1037 aaKnown RBP8.93□□□□□ -0.98
COLCA1-205ENST00000620864 CCNB3Q8WWL7 1395 aa8.93□□□□□ -0.98
COLCA1-205ENST00000620864 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
COLCA1-205ENST00000620864 CCDC66A2RUB6 948 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms