RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
VPS11-207ENST00000620429 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
VPS11-207ENST00000620429 KIAA0586Q9BVV6 1533 aa14.18□□□□□ -0.14
VPS11-207ENST00000620429 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
VPS11-207ENST00000620429 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
VPS11-207ENST00000620429 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
VPS11-207ENST00000620429 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
VPS11-207ENST00000620429 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
VPS11-207ENST00000620429 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
VPS11-207ENST00000620429 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
VPS11-207ENST00000620429 ADCY10Q96PN6 1610 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 CFAP43Q8NDM7 1665 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
VPS11-207ENST00000620429 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
VPS11-207ENST00000620429 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
VPS11-207ENST00000620429 ANP32AP39687 249 aaKnown RBP14.11□□□□□ -0.15
VPS11-207ENST00000620429 GLI2P10070 1586 aa14.11□□□□□ -0.15
VPS11-207ENST00000620429 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS11-207ENST00000620429 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
VPS11-207ENST00000620429 FMN1Q68DA7 1419 aa14.1□□□□□ -0.15
VPS11-207ENST00000620429 SAMD9Q5K651 1589 aa14.09□□□□□ -0.15
VPS11-207ENST00000620429 ANP32CO43423 234 aa14.08□□□□□ -0.15
VPS11-207ENST00000620429 UHRF1BP1LA0JNW5 1464 aa14.08□□□□□ -0.16
VPS11-207ENST00000620429 KDM6BO15054 1643 aa14.08□□□□□ -0.16
VPS11-207ENST00000620429 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 TIMELESSQ9UNS1 1208 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
VPS11-207ENST00000620429 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 PLB1Q6P1J6 1458 aa14.03□□□□□ -0.16
VPS11-207ENST00000620429 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
VPS11-207ENST00000620429 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
VPS11-207ENST00000620429 ABCC2Q92887 1545 aa14.02□□□□□ -0.17
VPS11-207ENST00000620429 NEFMP07197 916 aa14.01□□□□□ -0.17
VPS11-207ENST00000620429 IQGAP2Q13576 1575 aa14□□□□□ -0.17
VPS11-207ENST00000620429 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
VPS11-207ENST00000620429 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
VPS11-207ENST00000620429 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
VPS11-207ENST00000620429 MAGI3Q5TCQ9 1506 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 GSE1Q14687 1217 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 PTPRGP23470 1445 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 UGGT2Q9NYU1 1516 aa13.96□□□□□ -0.17
VPS11-207ENST00000620429 PPRC1Q5VV67 1664 aaKnown RBP13.96□□□□□ -0.17
VPS11-207ENST00000620429 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 KDM5BQ9UGL1 1544 aa13.94□□□□□ -0.18
VPS11-207ENST00000620429 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
VPS11-207ENST00000620429 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
VPS11-207ENST00000620429 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS11-207ENST00000620429 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
VPS11-207ENST00000620429 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
VPS11-207ENST00000620429 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
VPS11-207ENST00000620429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS11-207ENST00000620429 EPRSP07814 1512 aaKnown RBP13.91□□□□□ -0.18
VPS11-207ENST00000620429 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
VPS11-207ENST00000620429 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
VPS11-207ENST00000620429 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
VPS11-207ENST00000620429 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
VPS11-207ENST00000620429 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
VPS11-207ENST00000620429 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
VPS11-207ENST00000620429 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
VPS11-207ENST00000620429 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
VPS11-207ENST00000620429 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
VPS11-207ENST00000620429 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
VPS11-207ENST00000620429 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
VPS11-207ENST00000620429 FGD1P98174 961 aa13.85□□□□□ -0.19
VPS11-207ENST00000620429 AAMPQ13685 434 aa13.85□□□□□ -0.19
VPS11-207ENST00000620429 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
VPS11-207ENST00000620429 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
VPS11-207ENST00000620429 PTPN23Q9H3S7 1636 aa13.84□□□□□ -0.19
VPS11-207ENST00000620429 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
VPS11-207ENST00000620429 HFM1A2PYH4 1435 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 NAIPQ13075 1403 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
VPS11-207ENST00000620429 NUP153P49790 1475 aaKnown RBP13.82□□□□□ -0.2
VPS11-207ENST00000620429 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
VPS11-207ENST00000620429 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
VPS11-207ENST00000620429 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
VPS11-207ENST00000620429 PDE4CQ08493 712 aa13.78□□□□□ -0.2
VPS11-207ENST00000620429 ABCA8O94911 1581 aa13.78□□□□□ -0.2
VPS11-207ENST00000620429 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
VPS11-207ENST00000620429 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
VPS11-207ENST00000620429 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
VPS11-207ENST00000620429 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
VPS11-207ENST00000620429 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
VPS11-207ENST00000620429 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
VPS11-207ENST00000620429 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
VPS11-207ENST00000620429 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
VPS11-207ENST00000620429 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
VPS11-207ENST00000620429 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms