RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
SENP3-210ENST00000619785 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
SENP3-210ENST00000619785 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
SENP3-210ENST00000619785 PTPRGP23470 1445 aa13.06□□□□□ -0.32
SENP3-210ENST00000619785 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
SENP3-210ENST00000619785 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
SENP3-210ENST00000619785 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
SENP3-210ENST00000619785 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
SENP3-210ENST00000619785 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
SENP3-210ENST00000619785 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
SENP3-210ENST00000619785 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
SENP3-210ENST00000619785 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
SENP3-210ENST00000619785 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
SENP3-210ENST00000619785 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
SENP3-210ENST00000619785 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
SENP3-210ENST00000619785 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
SENP3-210ENST00000619785 UGGT2Q9NYU1 1516 aa13.01□□□□□ -0.33
SENP3-210ENST00000619785 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
SENP3-210ENST00000619785 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
SENP3-210ENST00000619785 MAGI3Q5TCQ9 1506 aa12.97□□□□□ -0.33
SENP3-210ENST00000619785 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
SENP3-210ENST00000619785 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
SENP3-210ENST00000619785 WDR7Q9Y4E6 1490 aa12.93□□□□□ -0.34
SENP3-210ENST00000619785 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
SENP3-210ENST00000619785 ADAMTSL3P82987 1691 aa12.91□□□□□ -0.34
SENP3-210ENST00000619785 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
SENP3-210ENST00000619785 KIF21BO75037 1637 aa12.9□□□□□ -0.34
SENP3-210ENST00000619785 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
SENP3-210ENST00000619785 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
SENP3-210ENST00000619785 ABCA8O94911 1581 aa12.89□□□□□ -0.35
SENP3-210ENST00000619785 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
SENP3-210ENST00000619785 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
SENP3-210ENST00000619785 FBXO41Q8TF61 875 aa12.85□□□□□ -0.35
SENP3-210ENST00000619785 GSE1Q14687 1217 aa12.84□□□□□ -0.35
SENP3-210ENST00000619785 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
SENP3-210ENST00000619785 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
SENP3-210ENST00000619785 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
SENP3-210ENST00000619785 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
SENP3-210ENST00000619785 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
SENP3-210ENST00000619785 PTPRMP28827 1452 aa12.79□□□□□ -0.36
SENP3-210ENST00000619785 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
SENP3-210ENST00000619785 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SENP3-210ENST00000619785 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.36
SENP3-210ENST00000619785 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
SENP3-210ENST00000619785 NBR1Q14596 966 aa12.76□□□□□ -0.37
SENP3-210ENST00000619785 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
SENP3-210ENST00000619785 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
SENP3-210ENST00000619785 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
SENP3-210ENST00000619785 NEO1Q92859 1461 aa12.73□□□□□ -0.37
SENP3-210ENST00000619785 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
SENP3-210ENST00000619785 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
SENP3-210ENST00000619785 ARHGEF40Q8TER5 1519 aa12.7□□□□□ -0.38
SENP3-210ENST00000619785 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
SENP3-210ENST00000619785 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SENP3-210ENST00000619785 ATP10BO94823 1461 aa12.69□□□□□ -0.38
SENP3-210ENST00000619785 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
SENP3-210ENST00000619785 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
SENP3-210ENST00000619785 NUBP1P53384 320 aa12.68□□□□□ -0.38
SENP3-210ENST00000619785 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
SENP3-210ENST00000619785 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
SENP3-210ENST00000619785 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
SENP3-210ENST00000619785 SIGLEC1Q9BZZ2 1709 aa12.66□□□□□ -0.38
SENP3-210ENST00000619785 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
SENP3-210ENST00000619785 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
SENP3-210ENST00000619785 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
SENP3-210ENST00000619785 TTC37Q6PGP7 1564 aa12.63□□□□□ -0.39
SENP3-210ENST00000619785 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
SENP3-210ENST00000619785 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
SENP3-210ENST00000619785 STK25O00506 426 aa12.61□□□□□ -0.39
SENP3-210ENST00000619785 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
SENP3-210ENST00000619785 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
SENP3-210ENST00000619785 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
SENP3-210ENST00000619785 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
SENP3-210ENST00000619785 PREX1Q8TCU6 1659 aa12.59□□□□□ -0.39
SENP3-210ENST00000619785 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
SENP3-210ENST00000619785 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
SENP3-210ENST00000619785 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
SENP3-210ENST00000619785 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
SENP3-210ENST00000619785 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
SENP3-210ENST00000619785 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
SENP3-210ENST00000619785 FANCAO15360 1455 aa12.57□□□□□ -0.4
SENP3-210ENST00000619785 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
SENP3-210ENST00000619785 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
SENP3-210ENST00000619785 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
SENP3-210ENST00000619785 RAPGEF3O95398 923 aa12.56□□□□□ -0.4
SENP3-210ENST00000619785 DENND4BO75064 1496 aaPredicted RBP12.55□□□□□ -0.4
SENP3-210ENST00000619785 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
SENP3-210ENST00000619785 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
SENP3-210ENST00000619785 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
SENP3-210ENST00000619785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.53□□□□□ -0.4
SENP3-210ENST00000619785 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
SENP3-210ENST00000619785 RYDENQ9NUL5 291 aaKnown RBP12.53□□□□□ -0.4
SENP3-210ENST00000619785 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
SENP3-210ENST00000619785 POGZQ7Z3K3 1410 aa12.52□□□□□ -0.41
SENP3-210ENST00000619785 AKNAQ7Z591 1439 aa12.52□□□□□ -0.41
SENP3-210ENST00000619785 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
SENP3-210ENST00000619785 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
SENP3-210ENST00000619785 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
SENP3-210ENST00000619785 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
SENP3-210ENST00000619785 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms